(used for variant description)
(last modified September 14, 2017)
This file was created to facilitate the description of sequence variants on transcript NM_012309.3 in the SHANK2 gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NG_042866.1, covering SHANK2 transcript NM_012309.3.
(upstream sequence)
. . . . . g.5018
gtctggaaatctctccaggcaccctgctttggccctctagaatacagacagt c.-61
. . . . . | 02. g.82436
tcctgctctaagaggccatctgtgaggctcagtctcccaacacctctg | acacaggcagcc c.-1
. . . . . . g.82496
ATGCCGCGCAGCCCAACATCCAGCGAGGACGAGATGGCCCAGAGCTTCTCCGACTACTCC c.60
M P R S P T S S E D E M A Q S F S D Y S p.20
. . . . . . g.82556
GTGGGGTCGGAGTCAGACAGCTCCAAAGAAGAGACCATCTATGACACGATCCGGGCCACT c.120
V G S E S D S S K E E T I Y D T I R A T p.40
. . . . . . g.82616
GCGGAGAAGCCGGGCGGTGCCAGGACGGAGGAGAGCCAGGGCAACACGCTGGTGATCCGC c.180
A E K P G G A R T E E S Q G N T L V I R p.60
. . | 03. . . . g.110763
GTGGTCATCCATGACCTGCAGCAGACG | AAATGCATTCGATTTAACCCGGATGCCACAGTG c.240
V V I H D L Q Q T | K C I R F N P D A T V p.80
. . . . . . g.110823
TGGGTTGCAAAGCAGCGGATCCTGTGTACATTAACCCAGAGTTTGAAAGATGTCCTGAAC c.300
W V A K Q R I L C T L T Q S L K D V L N p.100
. . . . . . g.110883
TACGGCCTGTTCCAGCCGGCCAGCAATGGGCGTGACGGCAAGTTCCTGGATGAGGAGCGG c.360
Y G L F Q P A S N G R D G K F L D E E R p.120
. . . . . | 04 . g.116407
CTCCTGCGCGAGTACCCACAGCCCGTGGGTGAGGGCGTTCCTTCCCTGGAG | TTTCGATAC c.420
L L R E Y P Q P V G E G V P S L E | F R Y p.140
. . . . . . g.116467
AAGAAGCGGGTGTATAAACAAGCCAGTCTCGATGAGAAACAGTTGGCCAAGCTCCACACG c.480
K K R V Y K Q A S L D E K Q L A K L H T p.160
| 05 . . . . . . g.119770
AAG | ACCAATCTGAAGAAATGCATGGATCACATTCAGCATCGCTTGGTGGAGAAGATCACC c.540
K | T N L K K C M D H I Q H R L V E K I T p.180
. . . . . | 06 . g.135082
AAGATGCTGGACCGAGGCCTGGATCCCAATTTCCACGACCCGGAGACCGGAG | AGACCCCC c.600
K M L D R G L D P N F H D P E T G E | T P p.200
. . . . . . g.135142
CTGACCTTAGCCGCTCAGCTGGACGACTCTGTGGAGGTCATCAAAGCTCTCAAAAATGGT c.660
L T L A A Q L D D S V E V I K A L K N G p.220
. . . . . . g.135202
GGAGCTCACCTGGACTTCCGTGCCAAAGATGGGATGACCGCCCTACACAAAGCTGCCCGA c.720
G A H L D F R A K D G M T A L H K A A R p.240
. . | 07 . . . . g.137209
GCGAGGAACCAAGTTGCCCTGAAG | ACCCTTTTAGAGCTTGGTGCATCCCCAGATTATAAA c.780
A R N Q V A L K | T L L E L G A S P D Y K p.260
. . . . . . g.137269
GACAGTTACGGCCTCACCCCGCTGTATCACACAGCCATCGTCGGAGGTGATCCCTACTGC c.840
D S Y G L T P L Y H T A I V G G D P Y C p.280
. . . . . . g.137329
TGCGAGCTTCTCCTGCACGAACACGCCACTGTGTGCTGCAAAGATGAGAACGGCTGGCAC c.900
C E L L L H E H A T V C C K D E N G W H p.300
. | 08 . . . . . g.154535
GAGATCCACCAG | GCCTGCAGGTACGGGCACGTGCAGCACCTGGAGCACCTGCTGTTCTAC c.960
E I H Q | A C R Y G H V Q H L E H L L F Y p.320
. . . . . . g.154595
GGGGCAGACATGAGTGCCCAGAATGCCTCGGGGAACACGGCCTTGCACATCTGCGCCCTC c.1020
G A D M S A Q N A S G N T A L H I C A L p.340
| 09 . . . . . g.173255
TACAACCAG | GACAGCTGTGCAAGAGTGCTTCTGTTTCGAGGCGGAAATAAGGAGTTAAAA c.1080
Y N Q | D S C A R V L L F R G G N K E L K p.360
. . | 10. . . . g.233228
AACTACAACAGCCAGACTCCATTTCAG | GTGGCCATAATAGCAGGCAACTTTGAGCTGGCA c.1140
N Y N S Q T P F Q | V A I I A G N F E L A p.380
. . . | 11 . . . g.309106
GAATACATCAAGAACCACAAGGAAACAGACATTG | TGCCCTTCCGAGAGGCCCCGGCGTAC c.1200
E Y I K N H K E T D I V | P F R E A P A Y p.400
. . . . . . g.309166
TCCAACCGCCGGCGGCGGCCCCCCAACACGCTGGCCGCCCCCCGGGTCCTGCTGCGCTCC c.1260
S N R R R R P P N T L A A P R V L L R S p.420
. . . . . . g.309226
AACAGTGACAACAACCTCAATGCCAGCGCTCCCGACTGGGCCGTCTGCTCCACGGCCACC c.1320
N S D N N L N A S A P D W A V C S T A T p.440
. . . . . . g.309286
TCGCACCGCAGCCTGTCACCCCAGCTGCTGCAGCAGATGCCCAGCAAGCCCGAGGGGGCC c.1380
S H R S L S P Q L L Q Q M P S K P E G A p.460
. . . . . . g.309346
GCGAAGACCATTGGGAGCTACGTGCCCGGGCCCCGCAGCCGGTCCCCATCGCTCAACAGG c.1440
A K T I G S Y V P G P R S R S P S L N R p.480
. . . . . | 12 . g.322598
CTGGGCGGCGCAGGCGAGGACGGCAAGAGGCCGCAGCCTCTCTGGCATGTCGG | GTCGCCT c.1500
L G G A G E D G K R P Q P L W H V G | S P p.500
. . . . . . g.322658
TTTGCTCTTGGTGCCAACAAGGACTCACTCTCGGCCTTCGAGTACCCGGGGCCCAAGCGG c.1560
F A L G A N K D S L S A F E Y P G P K R p.520
. . . . . . g.322718
AAGCTCTACAGTGCCGTGCCCGGGAGGCTCTTCGTCGCTGTCAAGCCATACCAACCCCAA c.1620
K L Y S A V P G R L F V A V K P Y Q P Q p.540
. . . . | 13 . . g.331223
GTGGACGGCGAGATCCCCCTTCACCGCGGTGACAGGGTCAAAG | TTCTGAGCATCGGTGAA c.1680
V D G E I P L H R G D R V K V | L S I G E p.560
. . . . . . g.331283
GGGGGCTTCTGGGAAGGCAGCGCCCGCGGCCACATCGGATGGTTTCCGGCGGAGTGCGTG c.1740
G G F W E G S A R G H I G W F P A E C V p.580
. . . | 14. . . g.431022
GAGGAGGTCCAGTGTAAGCCCAGGGACAGCCAGGCAG | AAACCCGCGCTGACCGCAGCAAG c.1800
E E V Q C K P R D S Q A E | T R A D R S K p.600
. . . . . | 15 . g.468091
AAGCTTTTCAGGCACTACACCGTGGGCTCCTATGACAGCTTCGACACTTCCAG | TGACTGC c.1860
K L F R H Y T V G S Y D S F D T S S | D C p.620
. . . . . . g.468151
ATTATTGAGGAGAAGACGGTGGTCCTGCAGAAAAAAGACAATGAGGGCTTTGGATTCGTG c.1920
I I E E K T V V L Q K K D N E G F G F V p.640
. | 16 . . . . . g.469854
CTTCGAGGGGCCAAAG | CTGACACACCCATTGAAGAATTCACACCAACACCGGCTTTCCCA c.1980
L R G A K A | D T P I E E F T P T P A F P p.660
. . . . . . g.469914
GCCCTACAGTACCTGGAGTCCGTGGATGAAGGTGGGGTGGCGTGGCAAGCCGGACTAAGG c.2040
A L Q Y L E S V D E G G V A W Q A G L R p.680
. . | 17 . . . . g.626870
ACCGGGGACTTCTTGATTGAG | GTTAACAATGAGAATGTTGTCAAAGTCGGCCACAGGCAG c.2100
T G D F L I E | V N N E N V V K V G H R Q p.700
. . . . . . g.626930
GTGGTGAACATGATCCGGCAGGGAGGGAATCACCTGGTCCTTAAGGTGGTCACGGTGACC c.2160
V V N M I R Q G G N H L V L K V V T V T p.720
. . . | 18. . . g.627499
AGGAATCTGGACCCCGACGACACCGCCAGGAAGAAAG | CTCCCCCGCCTCCAAAGCGGGCA c.2220
R N L D P D D T A R K K A | P P P P K R A p.740
. . . . . | 19 g.627833
CCGACCACAGCCCTCACCCTGCGCTCCAAGTCCATGACCTCGGAGCTGGAGGAGCTCG | TG c.2280
P T T A L T L R S K S M T S E L E E L V | p.760
| 20. . | 21 . . . g.637329
GATAAAG | CCTCGGTCCGGAAGAAGAAGG | ATAAACCCGAGGAGATAGTCCCGGCCTCCAAG c.2340
D K A | S V R K K K D | K P E E I V P A S K p.780
. . . . . . g.637389
CCCTCCCGCGCTGCTGAGAACATGGCTGTGGAACCGAGGGTGGCGACCATCAAGCAGCGG c.2400
P S R A A E N M A V E P R V A T I K Q R p.800
. . . | 22 . . g.639396
CCCAGCAGCCGGTGCTTCCCGGCGGGCTCAGACATGAAC | TCTGTGTACGAACGCCAAGGA c.2460
P S S R C F P A G S D M N | S V Y E R Q G p.820
. . . . . . g.639456
ATCGCCGTGATGACGCCCACTGTTCCTGGGAGCCCAAAAGCCCCGTTTCTGGGCATCCCT c.2520
I A V M T P T V P G S P K A P F L G I P p.840
. . . | 23 . . | 24 . g.642050
CGAGGTACGATGCGAAGGCAGAAATCAATAG | ACAGCAGAATCTTTCTATCAG | GAATAACA c.2580
R G T M R R Q K S I D | S R I F L S G | I T p.860
. . . . . . g.642110
GAGGAAGAGCGGCAGTTTCTGGCTCCTCCAATGCTGAAGTTCACCAGAAGCCTGTCCATG c.2640
E E E R Q F L A P P M L K F T R S L S M p.880
. . . . . . g.642170
CCGGACACCTCTGAGGACATCCCCCCTCCACCGCAGTCTGTGCCCCCGTCCCCACCACCA c.2700
P D T S E D I P P P P Q S V P P S P P P p.900
. . . . . . g.642230
CCTTCCCCAACCACTTACAACTGCCCCAAGTCCCCAACTCCAAGAGTCTACGGGACGATT c.2760
P S P T T Y N C P K S P T P R V Y G T I p.920
. . . . . . g.642290
AAGCCTGCGTTCAATCAGAATTCTGCCGCCAAGGTGTCCCCCGCCACCAGGTCCGACACC c.2820
K P A F N Q N S A A K V S P A T R S D T p.940
. . . . . . g.642350
GTGGCCACCATGATGAGGGAGAAGGGGATGTACTTCAGGAGAGAGCTGGACCGCTACTCC c.2880
V A T M M R E K G M Y F R R E L D R Y S p.960
. . . . . . g.642410
TTGGACTCTGAAGACCTCTACAGTCGGAATGCCGGCCCGCAAGCCAACTTCCGCAACAAG c.2940
L D S E D L Y S R N A G P Q A N F R N K p.980
. . . . . . g.642470
AGAGGCCAGATGCCAGAAAACCCATACTCAGAGGTGGGGAAGATCGCCAGCAAAGCCGTC c.3000
R G Q M P E N P Y S E V G K I A S K A V p.1000
. . . . . . g.642530
TACGTCCCCGCCAAGCCCGCCAGGCGGAAGGGGATGCTGGTGAAGCAGTCCAACGTGGAG c.3060
Y V P A K P A R R K G M L V K Q S N V E p.1020
. . . . . . g.642590
GACAGCCCCGAGAAGACGTGCTCCATCCCTATCCCGACCATCATCGTGAAGGAGCCGTCC c.3120
D S P E K T C S I P I P T I I V K E P S p.1040
. . . . . . g.642650
ACCAGCAGCAGCGGCAAGAGCAGCCAGGGCAGCAGCATGGAGATCGACCCCCAGGCCCCG c.3180
T S S S G K S S Q G S S M E I D P Q A P p.1060
. . . . . . g.642710
GAGCCACCGAGCCAGCTGCGGCCTGACGAAAGCCTGACCGTCAGCAGCCCCTTTGCCGCC c.3240
E P P S Q L R P D E S L T V S S P F A A p.1080
. . . . . . g.642770
GCCATCGCCGGAGCCGTCCGCGACCGTGAGAAGCGGCTGGAAGCCAGGAGGAACTCCCCG c.3300
A I A G A V R D R E K R L E A R R N S P p.1100
. . . . . . g.642830
GCCTTCCTCTCCACAGACCTGGGGGATGAGGATGTGGGCCTGGGGCCACCCGCCCCCAGG c.3360
A F L S T D L G D E D V G L G P P A P R p.1120
. . . . . . g.642890
ACGCGGCCCTCCATGTTCCCCGAGGAGGGGGATTTTGCTGACGAGGACAGCGCTGAGCAG c.3420
T R P S M F P E E G D F A D E D S A E Q p.1140
. . . . . . g.642950
CTGTCATCCCCCATGCCGAGTGCCACGCCCAGGGAGCCCGAAAACCATTTCGTGGGTGGC c.3480
L S S P M P S A T P R E P E N H F V G G p.1160
. . . . . . g.643010
GCCGAGGCCAGTGCTCCGGGTGAGGCTGGGAGGCCGCTGAATTCCACGTCCAAAGCCCAG c.3540
A E A S A P G E A G R P L N S T S K A Q p.1180
. . . . . . g.643070
GGGCCCGAGAGCAGCCCAGCAGTGCCCTCCGCGAGCAGCGGCACAGCCGGCCCCGGGAAT c.3600
G P E S S P A V P S A S S G T A G P G N p.1200
. . . . . . g.643130
TATGTCCACCCACTCACAGGGCGGCTGCTTGATCCCAGCTCCCCGCTGGCCCTGGCACTC c.3660
Y V H P L T G R L L D P S S P L A L A L p.1220
. . . . . . g.643190
TCCGCAAGGGACCGAGCCATGAAGGAGTCTCAACAGGGACCCAAAGGGGAGGCCCCCAAG c.3720
S A R D R A M K E S Q Q G P K G E A P K p.1240
. . . . . . g.643250
GCCGACCTCAACAAACCTCTTTACATTGATACCAAAATGCGGCCCAGCCTGGATGCCGGC c.3780
A D L N K P L Y I D T K M R P S L D A G p.1260
. . . . . . g.643310
TTCCCTACGGTCACCAGGCAGAACACCCGGGGACCCCTGAGGCGGCAGGAGACGGAGAAC c.3840
F P T V T R Q N T R G P L R R Q E T E N p.1280
. . . . . . g.643370
AAGTACGAGACCGACCTGGGCCGAGACCGGAAAGGCGATGACAAGAAGAACATGCTGATC c.3900
K Y E T D L G R D R K G D D K K N M L I p.1300
. . . . . . g.643430
GACATCATGGACACGTCCCAGCAGAAGTCGGCTGGCCTGCTGATGGTGCACACCGTGGAC c.3960
D I M D T S Q Q K S A G L L M V H T V D p.1320
. . . . . . g.643490
GCCACTAAGCTGGACAACGCCCTGCAGGAAGAGGACGAGAAGGCAGAGGTGGAGATGAAG c.4020
A T K L D N A L Q E E D E K A E V E M K p.1340
. . . . . . g.643550
CCAGACAGCTCGCCGTCCGAGGTGCCAGAAGGTGTTTCCGAAACCGAAGGTGCTTTACAG c.4080
P D S S P S E V P E G V S E T E G A L Q p.1360
. . . . . . g.643610
ATCTCCGCTGCCCCCGAGCCCACCACCGTGCCCGGCAGAACCATCGTCGCGGTGGGCTCC c.4140
I S A A P E P T T V P G R T I V A V G S p.1380
. . . . . . g.643670
ATGGAAGAGGCGGTGATTTTGCCATTCCGCATCCCTCCTCCCCCTCTGGCATCCGTGGAC c.4200
M E E A V I L P F R I P P P P L A S V D p.1400
. . . . . . g.643730
TTGGATGAGGATTTTATTTTTACAGAGCCATTGCCTCCTCCCCTGGAATTTGCAAATAGT c.4260
L D E D F I F T E P L P P P L E F A N S p.1420
. . . . . . g.643790
TTTGATATCCCCGATGACCGGGCAGCTTCTGTCCCGGCTCTCTCAGACTTAGTGAAGCAG c.4320
F D I P D D R A A S V P A L S D L V K Q p.1440
. . . . . . g.643850
AAGAAAAGCGACACCCCTCAGTCCCCTTCGTTGAACTCCAGCCAACCAACCAACTCTGCA c.4380
K K S D T P Q S P S L N S S Q P T N S A p.1460
. . . . . . g.643910
GACAGCAAGAAGCCAGCCAGTCTTTCAAACTGTCTGCCTGCCTCATTCCTGCCACCCCCT c.4440
D S K K P A S L S N C L P A S F L P P P p.1480
. . . . . . g.643970
GAAAGCTTTGACGCCGTCGCCGACTCTGGGATCGAGGAGGTGGACAGCCGGAGTAGCAGC c.4500
E S F D A V A D S G I E E V D S R S S S p.1500
. . . . . . g.644030
GACCACCACCTCGAGACGACCAGCACTATCTCCACCGTGTCTAGCATCTCCACCCTGTCT c.4560
D H H L E T T S T I S T V S S I S T L S p.1520
. . . . . . g.644090
TCCGAAGGTGGAGAGAATGTGGACACCTGCACAGTCTATGCAGATGGGCAAGCATTTATG c.4620
S E G G E N V D T C T V Y A D G Q A F M p.1540
. . . . . . g.644150
GTTGACAAACCCCCAGTACCTCCTAAGCCAAAAATGAAGCCCATCATTCACAAAAGCAAT c.4680
V D K P P V P P K P K M K P I I H K S N p.1560
. . . . . . g.644210
GCACTTTATCAAGACGCGCTCGTGGAAGAAGATGTAGATAGCTTTGTTATCCCCCCGCCC c.4740
A L Y Q D A L V E E D V D S F V I P P P p.1580
. . . . . . g.644270
GCTCCCCCGCCCCCGCCGGGCAGTGCCCAGCCTGGGATGGCCAAGGTTCTCCAGCCAAGG c.4800
A P P P P P G S A Q P G M A K V L Q P R p.1600
. . . . . . g.644330
ACCTCCAAGTTGTGGGGCGACGTCACAGAGATCAAAAGCCCGATTCTCTCAGGCCCAAAG c.4860
T S K L W G D V T E I K S P I L S G P K p.1620
. . . . . . g.644390
GCAAACGTTATTAGTGAATTGAACTCTATCCTACAGCAAATGAACCGAGAGAAATTGGCA c.4920
A N V I S E L N S I L Q Q M N R E K L A p.1640
. . . . . | 25 g.656324
AAGCCGGGGGAAGGACTGGATTCACCAATGGGAGCCAAGTCCGCCAGCCTCGCTCCAAG | A c.4980
K P G E G L D S P M G A K S A S L A P R | p.1660
. . . . . . g.656384
AGCCCGGAGATCATGAGCACCATCTCAGGTACACGGAGCACGACGGTCACCTTCACTGTT c.5040
S P E I M S T I S G T R S T T V T F T V p.1680
. . . . . . g.656444
CGCCCCGGCACCTCCCAGCCCATCACCCTGCAGAGCCGGCCCCCCGACTATGAAAGCAGG c.5100
R P G T S Q P I T L Q S R P P D Y E S R p.1700
. . . . . . g.656504
ACCTCAGGAACAAGACGTGCCCCAAGCCCTGTGGTCTCGCCAACAGAGATGAACAAAGAG c.5160
T S G T R R A P S P V V S P T E M N K E p.1720
. . . . . . g.656564
ACCCTGCCCGCCCCCCTGTCTGCTGCCACCGCCTCTCCTTCTCCCGCTCTCTCAGATGTC c.5220
T L P A P L S A A T A S P S P A L S D V p.1740
. . . . . . g.656624
TTTAGCCTTCCAAGCCAGCCCCCTTCTGGGGATCTATTTGGCTTGAACCCAGCGGGACGC c.5280
F S L P S Q P P S G D L F G L N P A G R p.1760
. . . . . . g.656684
AGTAGGTCGCCATCCCCCTCGATACTGCAACAGCCAATCTCAAATAAGCCTTTTACAACT c.5340
S R S P S P S I L Q Q P I S N K P F T T p.1780
. . . . . . g.656744
AAACCTGTCCACCTGTGGACTAAACCAGATGTGGCCGATTGGCTGGAAAGTCTAAACTTG c.5400
K P V H L W T K P D V A D W L E S L N L p.1800
. . . . . . g.656804
GGTGAACATAAAGAGGCCTTCATGGACAATGAGATCGATGGCAGTCACTTACCAAACCTG c.5460
G E H K E A F M D N E I D G S H L P N L p.1820
. . . . . . g.656864
CAGAAGGAGGACCTCATCGATCTTGGGGTAACTCGAGTCGGGCACAGAATGAACATAGAA c.5520
Q K E D L I D L G V T R V G H R M N I E p.1840
. . . g.656894
AGGGCTTTGAAACAGCTGCTGGACAGATAA c.5550
R A L K Q L L D R X p.1849
. . . . . . g.656954
ggacggctgctctccacctcgcagactgctcttgttataagtagagatgggctcgtgctg c.*60
. . . . . . g.657014
aaacatctgaatgccaagcgaagtctgtgagcatcaaccccactccatgggtttgtctcc c.*120
. . . . . . g.657074
tggtacccaaagaaatactgagttgtgtccacaacatggctgggtcttcagacccctggc c.*180
. . . . . . g.657134
tcaccatgtgggtgtcttgggcagtttctatcacacatgggacaaggggagggagttttt c.*240
. . . . . . g.657194
ctaacatggaaaaagattctcagcctgccgcccagcatgcaggtggcctcgctttgccgg c.*300
. . . . . . g.657254
gtccgagaggctccccgtcaattttgcacgggatcctagctcttgtaggcagacaccagt c.*360
. . . . . . g.657314
gcactctagatacctcctgagacctccgtcctctgctttccgggcagctctcaccacccc c.*420
. . . . . . g.657374
aggccccggcatgaggcctttcctcagtcctgtggcctctcagaggacacctgatgctca c.*480
. . . . . . g.657434
cctgcccctctttctcctgcacttggcttgcagtgagatgctcccagatgcatttgtcca c.*540
. . . . . . g.657494
gtgccccatcatgggcctgaaaggcagagaaactttttcctacacagattcttttcccca c.*600
. . . . . . g.657554
tctcctcctgtggtttgcatccatggctctttggccatgaggttcctggcagtgctggga c.*660
. . . . . . g.657614
gtttggatgggatcgtgcccagctttgcttagctttctttatttctgcaaatctgttagc c.*720
. . . . . . g.657674
ataattccaaggtggccaagcagatgtcacatggagttagtcaaagcacaaagtcacgat c.*780
. . . . . . g.657734
tccacaatggaggggagacctggccaagggagccagccagcgtgcaactgcccaagctcc c.*840
. . . . . . g.657794
aggtctccaggacaagagcagttgtctgccatgagcacccatccaggatggagaataagg c.*900
. . . . . . g.657854
gcttctctgcctctcagaattctttttaattgaagatgtcttgagctctgcaaagatcag c.*960
. . . . . . g.657914
agcaggtgagcatccactttgacatgaaggacaagaagacgcatggctcatggcgggcac c.*1020
. . . . . . g.657974
atgcggctgccagtgagacagcgtctcctctgggagctgggcgggcacagcatcctcagt c.*1080
. . . . . . g.658034
tctgtgcccagccaagggtgagcatctctgctgagacagtccttttgctctcggaggcca c.*1140
. . . . . . g.658094
gggaagatggtacttagaggcttttcccctatcgctctgggtgtctaggaatcccaccag c.*1200
. . . . . . g.658154
cttgtcttaacagtacaacagcttctttgaggacccagtgggtatggagtatagacagaa c.*1260
. . . . . . g.658214
cccagggttgagaacagaaggtgggcggcaggatcagagtgaaagcagaggcgtgaggag c.*1320
. . . . . . g.658274
aggaaagcagggaggtctcctgggctgccaggtcagcctctctggcaaggctttcttgag c.*1380
. . . . . . g.658334
ccccgcccctttctttccccggagtccctccaccccataacaatacctcgaatttccaaa c.*1440
. . . . . . g.658394
agaggtcaccagatgcacatgggccgcaaaacacacagtcaggcttccagcacattctcc c.*1500
. . . . . . g.658454
cccatttggaggatactcgaatgtcaggtttttggttttattattatttcagaactagct c.*1560
. . . . . . g.658514
cagcccatctctaattataaaacatggttttgttttttttttttcctttttttcttgatt c.*1620
. . . . . . g.658574
aggtctggaacagctctagaatgaacacataaaatttagcaatttaaaatctttctttac c.*1680
. . . . . . g.658634
tgcaagtttaaatagttgtacagatagtttataagcacaatattttaagaaaaaaaagtg c.*1740
. . . . . . g.658694
gctggtctactaggcagcctttgtgccacttcagtgctagaaagttaaagaaaaaaaaac c.*1800
. . . . . . g.658754
ttttgtgatttaataatactatttctgtggaataattataaaagtatgacctttttaaat c.*1860
. . . . . . g.658814
caaccttatttggatgcatctgaaccagcagagctgtgttatattttctatctttgctag c.*1920
. . . . . . g.658874
aacttcgtcattgaaggacaatttcttcaaagtggttacaattcataatgcagcagtttc c.*1980
. . . . . . g.658934
tccaaaaacaaaaacaaaacacacaccacacacacgcgcttttccagtcacacacccctg c.*2040
. . . . . . g.658994
atgttggaaccaagtttttggaccttctgttccaaaaccttttgcaggtcaatctttgta c.*2100
. . . . . . g.659054
tttgaaatgatccaatccaacttgaagtcaattgaatattaaggcgctttacttccgtgt c.*2160
. . . . . . g.659114
gctttcagtttttccatcatgagatgaatgagcattactctagataaatttcaagacagg c.*2220
. . . . . . g.659174
atactacaggtggcctgctgaggctgccccatattttagaaaatgtaaaaatggtggttt c.*2280
. . . . . . g.659234
ggccattaatttgtcttccatttgatgataccgcaaaattccgtgagtccattcctttgg c.*2340
. . . . . . g.659294
catggcactttccctgggcctacagttggtattacctctgtgctcagtgccaggcaaaac c.*2400
. . . . . . g.659354
actagctcaaaggagagtcaaggaaaccgctggcagacgataaccagtcgaaactcgtga c.*2460
. . . . . . g.659414
cttcggtttgttgaactttggcagccagttggtgagggccagatgttattccctttctta c.*2520
. . . . . . g.659474
aagatactccaagccacatgccactaaccacaagcaagctggctgcaagactaaagagct c.*2580
. . . . . . g.659534
gataacatagtttatttttacactgtcttattatagagaagtaatagacctatcagaacc c.*2640
. . . . . . g.659594
tgcactgaccaacaaataaacacatgttgccaagatgaatcggtctctatctctatctgc c.*2700
. . . . . . g.659654
ttattttggtactgaaagcaatagttcctcattcaaatcaccacccactgttctccccct c.*2760
. . . . . . g.659714
ttgggacatgttaggacgaggccctattccatgcccctctttaatggtggaacaaatgtt c.*2820
. . . . . . g.659774
aaactgctcatctaaagatcatgttgatattattccaggttttaagatcaacttttgtta c.*2880
. . . . . . g.659834
catactgtaatttaaataaactgcatttacatgcctagtttctgtaatattgtgtataca c.*2940
. . . . . . g.659894
aaacccaaatctctcaaaatgtaaattatgtatacctgccaagataccttttccagggtg c.*3000
. . . . . . g.659954
tctgcgcacattttaagttaattcacataatataaaaattactcaatgtgactgttgatt c.*3060
. . . . . . g.660014
tgctgaactttacatatcacaaagtgaattatttgtgatactttagttaataaaatggta c.*3120
. . . . . . g.660074
aatttttttctcagttattgaacaagcaagcattatccagttgatctggcaatgactttt c.*3180
. . . . . . g.660134
tgtgtgtgggccacaatattgattttcccattaacaatttttttttgttttttaaatact c.*3240
. . . . . . g.660194
aatatgtttcacactatagtttgtgtaacaacacgtgttcgcattatctatgttgctgtt c.*3300
. . . . . . g.660254
acttttgtgcttttattctttttagactttataaaaaaaaaaaaaagctcctgtaatttg c.*3360
. . . . . . g.660314
cactttctcccaatccttaaatctcttgtatggcaaccaaaattactgtaaaaaaataaa c.*3420
. . . . . . g.660374
tatactattgcactaaggttgtggttctgattgcaaacaaacagtgaacactgtctgaat c.*3480
. . . . . . g.660434
taaacaaaaagctgcccgacttgcaatctaatgtagattatctcaggcattgtggccagc c.*3540
. . . . . . g.660494
tctgcctctctaaaactgaccagaaaaatctctctcatcgagtaaacaggctcctgtcac c.*3600
. . . . . . g.660554
tgagctaatctgccttggttccatttccttattctcaatttatcaatggatacgtgcatg c.*3660
. . . . . . g.660614
ttatttcagaattatgcaaaacgtcaaaatctgcttctgtgaccgctgctataggcgtgg c.*3720
. . . . . . g.660674
agctgaggctcggcttttccttttgttctgggtggaagcagcggtgccgcggagggccag c.*3780
. . . . . . g.660734
ccagatccggacccttcccttagggtccagtctccccacaccccagcagggtgtcttcta c.*3840
. . . . . . g.660794
gccataaggccaagggagtggcagaactgggccgcctctctggttgacaagcaaaccaca c.*3900
. . . . . . g.660854
tgctaaggcttggagcaagagagaatttgtgtctattggcaaagaactaagccaggaaga c.*3960
. . . . . . g.660914
catgggccatccctccgctttagggaagcatattttaaacctaaacgttgaacttcttct c.*4020
. . . . . . g.660974
ttggcctcaccagtgaaaacttgttgtctttagttcctaaagtttcttctactttggcac c.*4080
. . . . . . g.661034
attccccagttgagcagcagcctctatgcttccacgttcaggaaaaattccagtcctcat c.*4140
. . . . . . g.661094
atcttttgtagttcaccctcaagctctcccgcttcaccatccaatagtttctcccaaacc c.*4200
. . . . . . g.661154
ttggcacccccctagactttgcttccaatggtttcttccagaccacttttcctagatgaa c.*4260
. . . . . . g.661214
tatattcgtttaccttactaggaaaattattggaagattttttcttttacttgaaattgg c.*4320
. . . . . . g.661274
aggcattttaataactggcgaactggaatgtgtttctgtatttgtagacaaccatgaacc c.*4380
. . . . . . g.661334
catgcaagtaggtgaacattccacagtggctgggtgaccacagcagctgcatgcagacag c.*4440
. . . . . . g.661394
gactgcccgtgctttgtggggaatcagagaatttccaaacttgtttctcagacttccgca c.*4500
. . . . . . g.661454
gatctcatcactttgatttctaatccatgctgtattggtgattttgtttatcgttcctgt c.*4560
. . . . . . g.661514
aacttgttctacattccacagtctttaccgttttatgttcaaaattacaacaatccctgt c.*4620
. . . . . . g.661574
ccattgattccactctggaactctttgttcatgccaattttgaaattttaatacgagcct c.*4680
. . . . . . g.661634
tcaaataaacacagaaaagaaaaaaaaaaaggaaaaaaaataaagtgtgtgccttgggtg c.*4740
. . . . . . g.661694
ttttgaacctgatctgcataaaaccatattgtattcaaatgctgtatctttcatgaaagg c.*4800
. . . . . . g.661754
ataaatatatcttcaatgtattaatgtagctgataaaatagttatagtgccttgttttct c.*4860
. . . . . . g.661814
gaactgagaagcccatatcaatgcacaacgtaaagaaaggacggttcgagctatgaaatg c.*4920
. . . . . . g.661874
ttgaggacacctacacgtgattctggagcctttctcatcataagactgtggaaaatacac c.*4980
. . . g.661907
agtcgtttaagttaaaaataaaaagtaaattga c.*5013
(downstream sequence)
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