All screenings for gene GPR98

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Template: Template(s) used to detect the sequence variant; DNA (genomic DNA), RNA (cDNA) or protein
All options:

DNA
RNA = RNA (cDNA)
protein
? = unknown

Technique: technique(s) used to identify the sequence variant.
All options:

? = unknown
ARMS = amplification refractory mutation system
arrayCGH = array for Comparative Genomic Hybridisation
arraySEQ = array for resequencing
arraySNP = array for SNP typing
arrayCNV = array for Copy Number Variation (SNP and CNV probes)
ASO = allele-specific oligo hybridisation
BESS = Base Excision Sequence Scanning
CMC = Chemical Mismatch Cleavage
COBRA = Combined Bisulfite Restriction Analysis
CSCE = Conformation Sensitive Capillary Electrophoresis
CSGE = Conformation Sensitive Gel Electrophoresis
ddF = dideoxy Fingerprinting
DGGE = Denaturing-Gradient Gel-Electrophoresis
DHPLC = Denaturing High-Performance Liquid Chromatography
DOVAM = Detection Of Virtually All Mutations (SSCA variant)
DSCA = Double-Strand DNA Conformation Analysis
DSDI = Detection Small Deletions and Insertions
EMC = Enzymatic Mismatch Cleavage
expr = expression analysis
FISH = Fluorescent In-Situ Hybridisation
FISHf = fiberFISH
HD = HeteroDuplex analysis
HPLC = High-Performance Liquid Chromatography
IEF = IsoElectric Focussing
IHC = Immuno-Histo-Chemistry
Invader = Invader assay
MAPH = Multiplex Amplifiable Probe Hybridisation
MAQ = Multiplex Amplicon Quantification
MCA = Melting Curve Analysis, high-resolution (HRMA)
microscope = microscopic analysis (karyotype)
microsat = microsatellite genotyping
minigene = expression minigene construct
MIP = Molecular Inversion Probe amplification
MIPsm = singele molecule Molecular Inversion Probe amplification
MLPA = Multiplex Ligation-dependent Probe Amplification
MLPA-ms = Multiplex Ligation-dependent Probe Amplification, methylation specific
MS = mass spectrometry
Northern = Northern blotting
NUC = nuclease digestion (RNAseT1, S1)
OM = optical mapping
PAGE = Poly-Acrylamide Gel-Electrophoresis
PCR = Polymerase Chain Reaction
PCRdd = PCR, digital droplet
PCRdig = PCR + restriction enzyme digestion
PCRh = PCR, haloplex
PCRlr = PCR, long-range
PCRm = PCR, multiplex
PCRms = PCR, methylation sensitive
PCRq = PCR, quantitative (qPCR)
PCRrp = PCR, repeat-primed (RP-PCR)
PCRsqd = PCR, semi-quantitative duplex
PE = primer extension (APEX, SNaPshot)
PEms = primer extension, methylation-sensitive single-nucleotide
PFGE = Pulsed-Field Gel-Electrophoresis (+Southern)
PTT = Protein Truncation Test
RFLP = Restriction Fragment Length Polymorphisms
RT-PCR = Reverse Transcription and PCR
RT-PCRq = Reverse Transcription and PCR, quantitative
SBE = Single Base Extension
SEQ = SEQuencing (Sanger)
SEQb = bisulfite SEQuencing
SEQp = pyroSequencing
SEQms = sequencing, methylation specific
SEQ-ON = next-generation sequencing - Oxford Nanopore
SEQ-NG = next-generation sequencing
SEQ-NG-RNA = next-generation sequencing RNA
SEQ-NG-H = next-generation sequencing - Helicos
SEQ-NG-I = next-generation sequencing - Illumina/Solexa
SEQ-NG-IT = next-generation sequencing - Ion Torrent
SEQ-NG-R = next-generation sequencing - Roche/454
SEQ-NG-S = next-generation sequencing - SOLiD
SEQ-PB = next-generation sequencing - Pacific Biosciences
SNPlex = SNPlex
Southern = Southern blotting
SSCA = Single-Strand DNA Conformation polymorphism Analysis (SSCP)
SSCAf = fluorescent SSCA (SSCP)
STR = Short Tandem Repeat
TaqMan = TaqMan assay
Western = Western blotting
- = not applicable

Tissue: tissue type used for analysis

Remarks: remarks regarding the screening like WGS (whole genome sequencing), WES (whole exome sequencing, gene panel (incl. a list of genes analysed), etc.

How to query this table

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Operator	Column type	Example	Matches
	Text	Arg	all entries containing 'Arg'
space	Text	Arg Ser	all entries containing 'Arg' and 'Ser'
\|	Text	Arg\|Ser	all entries containing 'Arg' or 'Ser'
!	Text	!fs	all entries not containing 'fs'
^	Text	^p.(Arg	all entries beginning with 'p.(Arg'
$	Text	Ser)$	all entries ending with 'Ser)'
=""	Text	=""	all entries with this field empty
=""	Text	="p.0"	all entries exactly matching 'p.0'
!=""	Text	!=""	all entries with this field not empty
!=""	Text	!="p.0"	all entries not exactly matching 'p.0?'
combination	Text	*\|Ter !fs	all entries containing '*' or 'Ter' but not containing 'fs'
	Date	2020	all entries matching the year 2020
\|	Date	2020-03\|2020-04	all entries matching March or April, 2020
!	Date	!2020-03	all entries not matching March, 2020
<	Date	<2020	all entries before the year 2020
<=	Date	<=2020-06	all entries in or before June, 2020
>	Date	>2020-06	all entries after June, 2020
>=	Date	>=2020-06-15	all entries on or after June 15th, 2020
combination	Date	2019\|2020 <2020-03	all entries in 2019 or 2020, and before March, 2020
	Numeric	23	all entries exactly matching 23
\|	Numeric	23\|24	all entries exactly matching 23 or 24
!	Numeric	!23	all entries not exactly matching 23
<	Numeric	<23	all entries lower than 23
<=	Numeric	<=23	all entries lower than, or equal to, 23
>	Numeric	>23	all entries higher than 23
>=	Numeric	>=23	all entries higher than, or equal to, 23
combination	Numeric	>=20 <30 !23	all entries with values from 20 to 29, but not equal to 23

Some more advanced examples:

Example	Matches
Asian	all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian	all entries containing 'Asian' but not containing 'Caucasian'
Asian\|African !Caucasian	all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"	all entries containing 'South Asian', but not containing 'South East Asian'

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114 entries on 2 pages. Showing entries 1 - 100.

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Screening ID	Individual ID	Template	Technique	Tissue	Remarks	Variants found	Owner
0000000079	00000079	DNA	SEQ-NG	-	-	5	Global Variome, with Curator vacancy
0000002914	00003008	DNA	SEQ	-	-	2	Marcel Nelen
0000016248	00016319	DNA	SEQ;SEQ-NG-I	-	-	1	Lab Zuffardi
0000016251	00016322	DNA	SEQ;SEQ-NG-I	-	-	3	Lab Zuffardi
0000016256	00016327	DNA	SEQ;SEQ-NG-I	-	-	2	Lab Zuffardi
0000059119	00059146	DNA	SEQ;SEQ-NG-I	-	-	3	Manou Sommen
0000059120	00059147	DNA	SEQ;SEQ-NG-I	-	-	2	Manou Sommen
0000059121	00059148	DNA	SEQ;SEQ-NG-I	-	-	2	Manou Sommen
0000156241	00155376	DNA	SEQ	-	-	1	Dror Sharon
0000309614	00308469	DNA	SEQ	-	-	1	Global Variome, with Curator vacancy
0000309615	00308470	DNA	SEQ	-	-	1	Global Variome, with Curator vacancy
0000309929	00308784	DNA	SEQ;SEQ-NG	-	14 gene panel	1	Global Variome, with Curator vacancy
0000310076	00308931	DNA	SEQ	-	-	1	Global Variome, with Curator vacancy
0000310077	00308932	DNA	SEQ	-	-	1	Global Variome, with Curator vacancy
0000310078	00308933	DNA	SEQ	-	-	1	Global Variome, with Curator vacancy
0000310079	00308934	DNA	SEQ	-	-	1	Global Variome, with Curator vacancy
0000310080	00308935	DNA	SEQ	-	-	1	Global Variome, with Curator vacancy
0000310081	00308936	DNA	SEQ	-	-	1	Global Variome, with Curator vacancy
0000310700	00309555	DNA	arraySEQ	-	-	2	Global Variome, with Curator vacancy
0000310703	00309558	DNA	arraySEQ	-	-	1	Global Variome, with Curator vacancy
0000310706	00309561	DNA	arraySEQ	-	-	2	Global Variome, with Curator vacancy
0000310707	00309562	DNA	arraySEQ	-	-	1	Global Variome, with Curator vacancy
0000310712	00309567	DNA	arraySEQ	-	-	1	Global Variome, with Curator vacancy
0000310716	00309571	DNA	arraySEQ	-	-	1	Global Variome, with Curator vacancy
0000310739	00309594	DNA	arraySEQ	-	-	2	Global Variome, with Curator vacancy
0000310751	00309606	DNA	arraySEQ	-	-	2	Global Variome, with Curator vacancy
0000310754	00309609	DNA	arraySEQ	-	-	1	Global Variome, with Curator vacancy
0000326718	00325507	DNA	SEQ;SEQ-NG	-	199 gene panel	2	Johan den Dunnen
0000329157	00327942	DNA	SEQ-NG	-	WES	2	LOVD
0000329218	00328003	DNA	SEQ-NG	-	WGS	1	LOVD
0000329249	00328034	DNA	SEQ-NG	-	WGS	2	LOVD
0000329313	00328098	DNA	SEQ-NG	-	WGS	2	LOVD
0000332846	00331627	DNA	SEQ-NG	-	-	2	LOVD
0000332847	00331628	DNA	SEQ-NG	-	-	2	LOVD
0000332925	00331706	DNA	SEQ-NG	-	-	1	LOVD
0000333672	00332448	DNA	SEQ-NG	-	11-gene panel	1	LOVD
0000335228	00334002	DNA	SEQ-NG	-	-	2	LOVD
0000335249	00334023	DNA	SEQ-NG	-	-	2	LOVD
0000336345	00335116	DNA	SEQ-NG	-	gene panel	2	LOVD
0000336481	00335252	DNA	SEQ-NG	-	212-gene panel	2	LOVD
0000336504	00335275	DNA	SEQ-NG	-	68-gene panel	2	Nereida Bravo Gil
0000336560	00335331	DNA	SEQ-NG	-	68-gene panel	1	Nereida Bravo Gil
0000336567	00335338	DNA	SEQ-NG	-	68-gene panel	1	Nereida Bravo Gil
0000364460	00363232	DNA	SEQ-NG	-	gene panel	2	LOVD
0000364547	00363319	DNA	SEQ-NG	-	gene panel	1	LOVD
0000364548	00363320	DNA	SEQ-NG	-	gene panel	2	LOVD
0000364549	00363321	DNA	SEQ-NG	-	gene panel	2	LOVD
0000364554	00363326	DNA	SEQ-NG	-	gene panel	1	LOVD
0000364555	00363327	DNA	SEQ-NG	-	gene panel	1	LOVD
0000364685	00363457	DNA	SEQ-NG	-	195-gene panel	2	LOVD
0000375176	00373944	DNA	SEQ-NG	-	238-gene panel	2	LOVD
0000376521	00375324	DNA	SEQ-NG	-	193-gene panel	2	LOVD
0000376522	00375325	DNA	SEQ-NG	-	193-gene panel	1	LOVD
0000377432	00376236	DNA	SSCA	-	-	2	LOVD
0000377433	00376237	DNA	SSCA	-	-	2	LOVD
0000377434	00376238	DNA	SSCA	-	-	2	LOVD
0000381042	00379840	DNA	SEQ-NG	-	panel of 441 hereditary eye disease genes including 291 genes related to IRD	2	LOVD
0000382948	00381732	DNA	PCR;SEQ-NG	blood or a saliva sample	-	2	LOVD
0000383532	00382318	DNA	SEQ-NG-I	blood	125 genes associated with inherited retinal disorders, see paper supplemental data	3	LOVD
0000386374	00385145	DNA	SEQ-NG-I	-	176 genes panel	2	LOVD
0000386376	00385147	DNA	SEQ-NG-I	-	176 genes panel	1	LOVD
0000386377	00385148	DNA	SEQ-NG-I	-	176 genes panel	1	LOVD
0000387796	00386568	DNA	SEQ-NG-I;SEQ	blood	-	2	LOVD
0000387804	00386576	DNA	SEQ-NG-I;SEQ	blood	-	2	LOVD
0000387908	00386680	DNA	SEQ-NG-I;SEQ	blood	-	3	LOVD
0000387909	00386681	DNA	SEQ-NG-I;SEQ	blood	-	2	LOVD
0000387912	00386684	DNA	SEQ-NG-I;SEQ	blood	-	2	LOVD
0000388023	00386795	DNA	SEQ-NG-I;SEQ	blood	-	2	LOVD
0000388058	00386830	DNA	SEQ-NG-I;SEQ	blood	-	2	LOVD
0000388081	00386853	DNA	SEQ-NG-I;PCRq	blood	-	2	LOVD
0000388092	00386864	DNA	SEQ-NG-I;SEQ	blood	-	1	LOVD
0000388103	00386875	DNA	SEQ-NG-I;SEQ	blood	-	3	LOVD
0000388109	00386881	DNA	SEQ-NG-I;SEQ	blood	-	1	LOVD
0000388342	00387116	DNA	SEQ-NG	blood	targeted sequencing	2	LOVD
0000390391	00389148	DNA	SEQ-NG	blood	RET2 targeted sequencing panel - see paper	1	LOVD
0000390421	00389178	DNA	SEQ-NG	blood	RET2 targeted sequencing panel - see paper	1	LOVD
0000390494	00389251	DNA	SEQ-NG	blood	RET8 targeted sequencing panel - see paper	2	LOVD
0000390635	00389392	DNA	SEQ-NG	blood	RET6 targeted sequencing panel - see paper	2	LOVD
0000391510	00390269	DNA	SEQ-NG-I	blood	whole genome sequencing	1	LOVD
0000391511	00390270	DNA	SEQ-NG-I	blood	whole genome sequencing	2	LOVD
0000391512	00390271	DNA	SEQ-NG-I	blood	whole genome sequencing	2	LOVD
0000391513	00390272	DNA	SEQ-NG-I	blood	whole genome sequencing	1	LOVD
0000392616	00391374	DNA	SEQ-NG	-	retrospective case note review, targeted gene panel testing	1	LOVD
0000392814	00391572	DNA	?	blood	NGS gene panel investigation in 60 families, Sanger sequencing in 27 families, and Asper microarray in 25 families	2	LOVD
0000393902	00392655	DNA	SEQ-NG-I;SEQ	-	whole exome sequencing	1	LOVD
0000394790	00393542	DNA	SEQ-NG	-	hereditary eye disease enrichment panel (HEDEP)	2	LOVD
0000394868	00393620	DNA	SEQ-NG	-	hereditary eye disease enrichment panel (HEDEP)	2	LOVD
0000395204	00393956	DNA	arraySNP;SEQ-NG	blood	WES	1	LOVD
0000395598	00394351	DNA	SEQ-NG	-	retrospective analysis	1	LOVD
0000395937	00394690	DNA	SEQ	-	-	1	LOVD
0000395938	00394691	DNA	SEQ	-	-	2	LOVD
0000395939	00394692	DNA	SEQ	-	-	2	LOVD
0000395940	00394693	DNA	SEQ	-	-	2	LOVD
0000397498	00396257	DNA	SEQ-NG;SEQ	-	-	1	LOVD
0000397499	00396258	DNA	SEQ-NG;SEQ	-	-	1	LOVD
0000397523	00396282	DNA	SEQ-NG;SEQ	-	-	1	LOVD
0000397524	00396283	DNA	SEQ-NG;SEQ	-	-	1	LOVD
0000397575	00396334	DNA	SEQ-NG;SEQ	-	-	2	LOVD
0000397576	00396335	DNA	SEQ-NG;SEQ	-	-	2	LOVD
0000397577	00396336	DNA	SEQ-NG;SEQ	-	-	2	LOVD

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Global Variome shared LOVD

GPR98 (G protein-coupled receptor 98)