Global Variome shared LOVD
SDHD (succinate dehydrogenase complex, subunit D, i...)
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Curators:
Jean-Pierre Bayley
and
Peter Taschner
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View SDHD gene homepage
View graphs about the SDHD gene database
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View all transcripts of gene SDHD
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View all variants affecting transcripts
View unique variants in gene SDHD
View all variants in gene SDHD
Full data view for gene SDHD
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View all individuals
View all individuals with variants in gene SDHD
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View all diseases
View all diseases associated with gene SDHD
Create a new disease information entry
View available phenotype columns
View all screenings
View all screenings for gene SDHD
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Enable more custom columns
Submit new data
All screenings for gene SDHD
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Template
: Template(s) used to detect the sequence variant; DNA (genomic DNA), RNA (cDNA) or protein
All options:
DNA
RNA = RNA (cDNA)
protein
? = unknown
Technique
: technique(s) used to identify the sequence variant.
All options:
? = unknown
ARMS = amplification refractory mutation system
arrayCGH = array for Comparative Genomic Hybridisation
arraySEQ = array for resequencing
arraySNP = array for SNP typing
arrayCNV = array for Copy Number Variation (SNP and CNV probes)
ASO = allele-specific oligo hybridisation
BESS = Base Excision Sequence Scanning
CMC = Chemical Mismatch Cleavage
COBRA = Combined Bisulfite Restriction Analysis
CSCE = Conformation Sensitive Capillary Electrophoresis
CSGE = Conformation Sensitive Gel Electrophoresis
ddF = dideoxy Fingerprinting
DGGE = Denaturing-Gradient Gel-Electrophoresis
DHPLC = Denaturing High-Performance Liquid Chromatography
DOVAM = Detection Of Virtually All Mutations (SSCA variant)
DSCA = Double-Strand DNA Conformation Analysis
DSDI = Detection Small Deletions and Insertions
EMC = Enzymatic Mismatch Cleavage
expr = expression analysis
FISH = Fluorescent In-Situ Hybridisation
FISHf = fiberFISH
HD = HeteroDuplex analysis
HPLC = High-Performance Liquid Chromatography
IEF = IsoElectric Focussing
IHC = Immuno-Histo-Chemistry
Invader = Invader assay
MAPH = Multiplex Amplifiable Probe Hybridisation
MAQ = Multiplex Amplicon Quantification
MCA = Melting Curve Analysis, high-resolution (HRMA)
microscope = microscopic analysis (karyotype)
microsat = microsatellite genotyping
minigene = expression minigene construct
MIP = Molecular Inversion Probe amplification
MIPsm = singele molecule Molecular Inversion Probe amplification
MLPA = Multiplex Ligation-dependent Probe Amplification
MLPA-ms = Multiplex Ligation-dependent Probe Amplification, methylation specific
MS = mass spectrometry
Northern = Northern blotting
NUC = nuclease digestion (RNAseT1, S1)
OM = optical mapping
PAGE = Poly-Acrylamide Gel-Electrophoresis
PCR = Polymerase Chain Reaction
PCRdd = PCR, digital droplet
PCRdig = PCR + restriction enzyme digestion
PCRh = PCR, haloplex
PCRlr = PCR, long-range
PCRm = PCR, multiplex
PCRms = PCR, methylation sensitive
PCRq = PCR, quantitative (qPCR)
PCRrp = PCR, repeat-primed (RP-PCR)
PCRsqd = PCR, semi-quantitative duplex
PE = primer extension (APEX, SNaPshot)
PEms = primer extension, methylation-sensitive single-nucleotide
PFGE = Pulsed-Field Gel-Electrophoresis (+Southern)
PTT = Protein Truncation Test
RFLP = Restriction Fragment Length Polymorphisms
RT-PCR = Reverse Transcription and PCR
RT-PCRq = Reverse Transcription and PCR, quantitative
SBE = Single Base Extension
SEQ = SEQuencing (Sanger)
SEQb = bisulfite SEQuencing
SEQp = pyroSequencing
SEQms = sequencing, methylation specific
SEQ-ON = next-generation sequencing - Oxford Nanopore
SEQ-NG = next-generation sequencing
SEQ-NG-H = next-generation sequencing - Helicos
SEQ-NG-I = next-generation sequencing - Illumina/Solexa
SEQ-NG-IT = next-generation sequencing - Ion Torrent
SEQ-NG-R = next-generation sequencing - Roche/454
SEQ-NG-S = next-generation sequencing - SOLiD
SEQ-PB = next-generation sequencing - Pacific Biosciences
SNPlex = SNPlex
Southern = Southern blotting
SSCA = Single-Strand DNA Conformation polymorphism Analysis (SSCP)
SSCAf = fluorescent SSCA (SSCP)
STR = Short Tandem Repeat
TaqMan = TaqMan assay
Western = Western blotting
- = not applicable
Tissue
: tissue type used for analysis
Remarks
: remarks regarding the screening like WGS (whole genome sequencing), WES (whole exome sequencing, gene panel (incl. a list of genes analysed), etc.
How to query this table
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Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
412 entries on 5 pages. Showing entries 1 - 100.
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How to query
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Screening ID
Individual ID
Template
Technique
Tissue
Remarks
Variants found
Owner
0000037080
00037010
DNA
SEQ
-
-
1
Andreas Laner
0000037081
00037011
DNA
SEQ
-
-
1
Andreas Laner
0000037082
00037012
DNA
SEQ
-
-
1
Andreas Laner
0000037083
00037013
DNA
SEQ
-
-
1
Andreas Laner
0000072626
00072469
DNA
SEQ;PCRsqd
-
-
1
Jean-Pierre Bayley
0000072627
00072470
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072628
00072471
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072629
00072472
DNA
SEQ;SSCA
-
-
1
Jean-Pierre Bayley
0000072630
00072473
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072631
00072474
DNA
SEQ;SSCA
-
-
1
Jean-Pierre Bayley
0000072632
00072475
DNA
SSCA;SEQ;DHPLC
-
-
1
Jean-Pierre Bayley
0000072633
00072476
DNA
SSCA;SEQ
-
-
1
Jean-Pierre Bayley
0000072634
00072477
DNA
SSCA;SEQ
-
-
1
Jean-Pierre Bayley
0000072635
00072478
DNA
SEQ;SSCA
-
-
1
Jean-Pierre Bayley
0000072636
00072479
DNA
SEQ;SSCA
-
-
1
Jean-Pierre Bayley
0000072637
00072480
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072638
00072481
DNA
SEQ;SSCA
-
-
1
Jean-Pierre Bayley
0000072639
00072482
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072640
00072483
DNA
SSCA;SEQ
-
-
1
Jean-Pierre Bayley
0000072641
00072484
DNA
SEQ;SSCA
-
-
1
Jean-Pierre Bayley
0000072642
00072485
DNA
SSCA;SEQ
-
-
1
Jean-Pierre Bayley
0000072643
00072486
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072644
00072487
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072645
00072488
DNA
SEQ
-
-
1
Jovana Vignjevic
0000072646
00072489
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072647
00072490
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072648
00072491
DNA
DHPLC;SEQ;SSCA
-
-
1
Jean-Pierre Bayley
0000072649
00072492
DNA
SEQ;SSCA
-
-
1
Jean-Pierre Bayley
0000072650
00072493
DNA
SEQ
-
-
1
Janneke Weiss
0000072651
00072494
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072652
00072495
DNA
SEQ
-
-
1
Janneke Weiss
0000072653
00072496
DNA
DHPLC
-
-
1
Jean-Pierre Bayley
0000072654
00072497
DNA ;RNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072655
00072498
DNA
SEQ
-
-
1
Janneke Weiss
0000072656
00072499
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072657
00072500
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072658
00072501
DNA
SEQ;SSCA
-
-
1
Jean-Pierre Bayley
0000072659
00072502
DNA
SSCA;SEQ
-
-
1
Jean-Pierre Bayley
0000072660
00072503
DNA
SSCA;SEQ
-
-
1
Jean-Pierre Bayley
0000072661
00072504
DNA
SEQ
-
-
1
Janneke Weiss
0000072662
00072505
DNA ;RNA
SEQ;SSCA
-
-
1
Jean-Pierre Bayley
0000072663
00072506
DNA
SSCA;SEQ
-
-
1
Jean-Pierre Bayley
0000072664
00072507
DNA
SSCA;SEQ
-
-
1
Jean-Pierre Bayley
0000072665
00072508
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072666
00072509
DNA
SEQ
-
-
1
Manuel rey BARRERA
0000072667
00072510
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072668
00072511
DNA
SEQ;SSCA
-
-
1
Jean-Pierre Bayley
0000072669
00072512
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072670
00072513
DNA
SEQ;SSCA
-
-
1
Jean-Pierre Bayley
0000072671
00072514
DNA
DHPLC
-
-
1
Jean-Pierre Bayley
0000072672
00072515
DNA
SEQ
-
-
1
Janneke Weiss
0000072673
00072516
DNA
SEQ;SSCA
-
-
1
Jean-Pierre Bayley
0000072674
00072517
DNA
SEQ
-
-
1
Janneke Weiss
0000072675
00072518
DNA
SSCA;SEQ
-
-
1
Jean-Pierre Bayley
0000072676
00072519
DNA
SSCA;SEQ
-
-
1
Jean-Pierre Bayley
0000072677
00072520
DNA
DHPLC
-
-
1
Jean-Pierre Bayley
0000072678
00072521
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072679
00072522
DNA
SSCA;SEQ;DHPLC
-
-
1
Jean-Pierre Bayley
0000072680
00072523
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072681
00072524
DNA
SEQ;SSCA
-
-
1
Jean-Pierre Bayley
0000072682
00072525
DNA
SEQ
-
-
1
Kazumasa Isobe
0000072683
00072526
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072684
00072527
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072685
00072528
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072686
00072529
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072687
00072530
DNA
SEQ;SSCA
-
-
1
Jean-Pierre Bayley
0000072688
00072531
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072689
00072532
DNA
SSCA;SEQ
-
-
1
Jean-Pierre Bayley
0000072690
00072533
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072691
00072534
DNA
SEQ;SSCA
-
-
1
Ginesa Garcia-Rostan
0000072692
00072535
DNA
SSCA;SEQ
-
-
1
Jean-Pierre Bayley
0000072693
00072536
DNA
SSCA;SEQ
-
-
1
Jean-Pierre Bayley
0000072694
00072537
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072695
00072538
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072696
00072539
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072697
00072540
DNA
SSCA;SEQ
-
-
1
Jean-Pierre Bayley
0000072698
00072541
DNA
SEQ
-
-
1
Barbara Pasini
0000072699
00072542
DNA
SEQ
-
-
2
Jean-Pierre Bayley
0000072700
00072543
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072702
00072545
DNA
SEQ;SSCA
-
-
1
Ginesa Garcia-Rostan
0000072711
00072554
DNA
SEQ;SSCA
-
-
1
Jean-Pierre Bayley
0000072712
00072555
DNA
SEQ;SSCA
-
-
1
Jean-Pierre Bayley
0000072715
00072558
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072716
00072559
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072721
00072564
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072900
00072743
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072901
00072744
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072906
00072749
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072912
00072755
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072915
00072758
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072916
00072759
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072917
00072760
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072920
00072763
DNA
SEQ
-
-
1
Takeshi Usui
0000072927
00072770
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072932
00072775
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072940
00072783
DNA
SEQ
-
-
1
Janneke Weiss
0000072942
00072785
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072943
00072786
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072952
00072795
DNA
SEQ
-
-
1
Jean-Pierre Bayley
0000072953
00072796
DNA
SEQ
-
-
1
Jean-Pierre Bayley
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