All screenings for gene SSBP1

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Template: Template(s) used to detect the sequence variant; DNA (genomic DNA), RNA (cDNA) or protein
All options:

DNA
RNA = RNA (cDNA)
protein
? = unknown

Technique: technique(s) used to identify the sequence variant.
All options:

? = unknown
ARMS = amplification refractory mutation system
arrayCGH = array for Comparative Genomic Hybridisation
arrayMET = array for methylation analysis
arraySEQ = array for resequencing
arraySNP = array for SNP typing
arrayCNV = array for Copy Number Variation (SNP and CNV probes)
ASO = allele-specific oligo hybridisation
BESS = Base Excision Sequence Scanning
CMC = Chemical Mismatch Cleavage
COBRA = Combined Bisulfite Restriction Analysis
CSCE = Conformation Sensitive Capillary Electrophoresis
CSGE = Conformation Sensitive Gel Electrophoresis
ddF = dideoxy Fingerprinting
DGGE = Denaturing-Gradient Gel-Electrophoresis
DHPLC = Denaturing High-Performance Liquid Chromatography
DOVAM = Detection Of Virtually All Mutations (SSCA variant)
DSCA = Double-Strand DNA Conformation Analysis
DSDI = Detection Small Deletions and Insertions
EMC = Enzymatic Mismatch Cleavage
expr = expression analysis
FISH = Fluorescent In-Situ Hybridisation
FISHf = fiberFISH
HD = HeteroDuplex analysis
HPLC = High-Performance Liquid Chromatography
IEF = IsoElectric Focussing
IHC = Immuno-Histo-Chemistry
Invader = Invader assay
MAPH = Multiplex Amplifiable Probe Hybridisation
MAQ = Multiplex Amplicon Quantification
MCA = Melting Curve Analysis, high-resolution (HRMA)
microscope = microscopic analysis (karyotype)
microsat = microsatellite genotyping
minigene = expression minigene construct
MIP = Molecular Inversion Probe amplification
MIPsm = single molecule Molecular Inversion Probe amplification
MLPA = Multiplex Ligation-dependent Probe Amplification
MLPA-ms = Multiplex Ligation-dependent Probe Amplification, methylation specific
MS = mass spectrometry
Northern = Northern blotting
NUC = nuclease digestion (RNAseT1, S1)
OM = optical mapping
PAGE = Poly-Acrylamide Gel-Electrophoresis
PCR = Polymerase Chain Reaction
PCRdd = PCR, digital droplet
PCRdig = PCR + restriction enzyme digestion
PCRh = PCR, haloplex
PCRlr = PCR, long-range
PCRm = PCR, multiplex
PCRms = PCR, methylation sensitive
PCRq = PCR, quantitative (qPCR)
PCRrp = PCR, repeat-primed (RP-PCR)
PCRsqd = PCR, semi-quantitative duplex
PE = primer extension (APEX, SNaPshot)
PEms = primer extension, methylation-sensitive single-nucleotide
PFGE = Pulsed-Field Gel-Electrophoresis (+Southern)
PTT = Protein Truncation Test
RFLP = Restriction Fragment Length Polymorphisms
RT-PCR = Reverse Transcription and PCR
RT-PCRq = Reverse Transcription and PCR, quantitative
SBE = Single Base Extension
SEQ = SEQuencing (Sanger)
SEQb = bisulfite SEQuencing
SEQp = pyroSequencing
SEQms = sequencing, methylation specific
SEQ-ON = next-generation sequencing - Oxford Nanopore
SEQ-NG = next-generation sequencing
SEQ-NG-RNA = next-generation sequencing RNA
SEQ-NG-H = next-generation sequencing - Helicos
SEQ-NG-I = next-generation sequencing - Illumina/Solexa
SEQ-NG-IT = next-generation sequencing - Ion Torrent
SEQ-NG-R = next-generation sequencing - Roche/454
SEQ-NG-S = next-generation sequencing - SOLiD
SEQ-PB = next-generation sequencing - Pacific Biosciences
SNPlex = SNPlex
Southern = Southern blotting
SSCA = Single-Strand DNA Conformation polymorphism Analysis (SSCP)
SSCAf = fluorescent SSCA (SSCP)
STR = Short Tandem Repeat
TaqMan = TaqMan assay
Western = Western blotting
- = not applicable

Tissue: tissue type used for analysis

Remarks: remarks regarding the screening like WGS (whole genome sequencing), WES (whole exome sequencing, gene panel (incl. a list of genes analysed), etc.

How to query this table

All list views have search fields which can be used to search data. You can search for a complete word or you can search for a part of a search term. If you enclose two or more words in double quotes, LOVD will search for the combination of those words only exactly in the order you specify. Note that search terms are case-insensitive and that wildcards such as * are treated as normal text! For all options, like "and", "or", and "not" searches, or searching for prefixes or suffixes, see the table below.

Operator	Column type	Example	Matches
	Text	Arg	all entries containing 'Arg'
space	Text	Arg Ser	all entries containing 'Arg' and 'Ser'
\|	Text	Arg\|Ser	all entries containing 'Arg' or 'Ser'
!	Text	!fs	all entries not containing 'fs'
^	Text	^p.(Arg	all entries beginning with 'p.(Arg'
$	Text	Ser)$	all entries ending with 'Ser)'
=""	Text	=""	all entries with this field empty
=""	Text	="p.0"	all entries exactly matching 'p.0'
!=""	Text	!=""	all entries with this field not empty
!=""	Text	!="p.0"	all entries not exactly matching 'p.0?'
combination	Text	*\|Ter !fs	all entries containing '*' or 'Ter' but not containing 'fs'
	Date	2020	all entries matching the year 2020
\|	Date	2020-03\|2020-04	all entries matching March or April, 2020
!	Date	!2020-03	all entries not matching March, 2020
<	Date	<2020	all entries before the year 2020
<=	Date	<=2020-06	all entries in or before June, 2020
>	Date	>2020-06	all entries after June, 2020
>=	Date	>=2020-06-15	all entries on or after June 15th, 2020
combination	Date	2019\|2020 <2020-03	all entries in 2019 or 2020, and before March, 2020
	Numeric	23	all entries exactly matching 23
\|	Numeric	23\|24	all entries exactly matching 23 or 24
!	Numeric	!23	all entries not exactly matching 23
<	Numeric	<23	all entries lower than 23
<=	Numeric	<=23	all entries lower than, or equal to, 23
>	Numeric	>23	all entries higher than 23
>=	Numeric	>=23	all entries higher than, or equal to, 23
combination	Numeric	>=20 <30 !23	all entries with values from 20 to 29, but not equal to 23

Some more advanced examples:

Example	Matches
Asian	all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian	all entries containing 'Asian' but not containing 'Caucasian'
Asian\|African !Caucasian	all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"	all entries containing 'South Asian', but not containing 'South East Asian'

To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.

98 entries on 1 page. Showing entries 1 - 98.

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How to query

Screening ID	Individual ID	Template	Technique	Tissue	Remarks	Variants found	Owner
0000418620	00417328	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000419146	00417851	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000419151	00417856	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000419606	00418311	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000419607	00418312	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000419608	00418313	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000419609	00418314	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000419662	00418367	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000419941	00418643	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000419974	00418649	DNA	SEQ-NG	-	-	2	Mohamed Selhane
0000419976	00418681	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420048	00418719	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420050	00418753	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420052	00418754	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420053	00418755	DNA	SEQ-NG	-	-	2	Mohamed Selhane
0000420054	00418756	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420062	00418764	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420063	00418765	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420064	00418766	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420067	00418767	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420084	00418786	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420085	00418787	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420086	00418788	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420087	00418789	DNA	SEQ-ON	-	-	1	Mohamed Selhane
0000420088	00418790	DNA	SEQ-ON	-	-	1	Mohamed Selhane
0000420089	00418791	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420090	00418792	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420091	00418793	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420092	00418794	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420093	00418795	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420094	00418796	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420095	00418797	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420096	00418799	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420097	00418800	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420098	00418801	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420099	00418802	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420100	00418803	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420105	00418808	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420106	00418809	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420107	00418810	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420108	00418811	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420984	00419680	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420987	00419682	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000420989	00419684	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421032	00419727	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421033	00419728	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421034	00419729	DNA	ARMS	-	-	1	Mohamed Selhane
0000421035	00419730	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421036	00419731	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421213	00419908	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421214	00419909	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421215	00419910	DNA	SEQ-NG-I	-	-	1	Mohamed Selhane
0000421217	00419912	DNA	SEQ-NG-I	-	-	1	Mohamed Selhane
0000421218	00419913	DNA	SEQ-NG-I	-	-	1	Mohamed Selhane
0000421219	00419914	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421220	00419915	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421221	00419916	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421222	00419917	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421223	00419918	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421224	00419919	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421225	00419920	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421226	00419921	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421227	00419922	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421228	00419923	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421229	00419924	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421230	00419925	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421231	00419926	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000421232	00419927	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000448222	00446648	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000448223	00446649	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000448224	00446650	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000448225	00446651	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000454552	00452949	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000454553	00452950	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000455066	00453452	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000455067	00453453	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000455068	00453454	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000457231	00455617	DNA	SEQ-NG	-	-	2	Mohamed Selhane
0000457286	00455672	DNA	SEQ-NG	-	-	2	Mohamed Selhane
0000457287	00455673	DNA	SEQ-NG	-	-	2	Mohamed Selhane
0000457288	00455674	DNA	SEQ-NG	-	-	2	Mohamed Selhane
0000457289	00455675	DNA	SEQ-NG	-	-	2	Mohamed Selhane
0000457290	00455676	DNA	SEQ-NG	-	-	2	Mohamed Selhane
0000461376	00459748	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000461401	00459773	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000461402	00459774	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000461403	00459775	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000461404	00459776	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000461405	00459777	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000461406	00459778	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000461407	00459779	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000461408	00459780	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000461409	00459781	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000461410	00459782	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000461411	00459783	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000461412	00459784	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000461413	00459785	DNA	SEQ-NG	-	-	1	Mohamed Selhane
0000461414	00459786	DNA	SEQ-NG	-	-	1	Mohamed Selhane

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How to query

Global Variome shared LOVD

SSBP1 (single-stranded DNA binding protein 1, mitoc...)