Variant #0000255499 (NC_000002.11:g.234677001del, NM_000463.2:c.1220del (UGT1A1))

Chromosome 2
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.234677001del
DNA change (hg38) g.233768355del
Published as UGT1A1(NM_000463.2):c.1220del (p.(Lys407Argfs*5)), UGT1A1(NM_000463.2):c.1220delA (p.K407Rfs*5), UGT1A1(NM_000463.3):c.1220delA (p.K407Rfs*5)
ISCN -
DB-ID UGT1A1_000044 See all 17 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2023-11-27 17:27:23 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

Haplotype     

RNA change     

Protein     
UGT1A1 NM_000463.2 +/. - c.1220del - r.(?) p.(Lys407ArgfsTer5)
DNAJB3 NM_001001394.3 +/. - c.-24438del - r.(?) p.(=)
UGT1A6 NM_001072.3 +/. - c.1217del - r.(?) p.(Lys406ArgfsTer5)
UGT1A4 NM_007120.2 +/. - c.1223del - r.(?) p.(Lys408ArgfsTer5)
UGT1A10 NM_019075.2 +/. - c.1211del - r.(?) p.(Lys404ArgfsTer5)
UGT1A8 NM_019076.4 +/. - c.1211del - r.(?) p.(Lys404ArgfsTer5)
UGT1A7 NM_019077.2 +/. - c.1211del - r.(?) p.(Lys404ArgfsTer5)
UGT1A5 NM_019078.1 +/. - c.1223del - r.(?) p.(Lys408ArgfsTer5)
UGT1A3 NM_019093.2 +/. - c.1223del - r.(?) p.(Lys408ArgfsTer5)
UGT1A9 NM_021027.2 +/. - c.1211del - r.(?) p.(Lys404ArgfsTer5)
UGT1A6 NM_205862.1 +/. - c.416del - r.(?) p.(Lys139ArgfsTer5)


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