Full data view for gene COL3A1

Ehlers Danlos Syndrome Variant Database


Information The variants shown are described using the NM_000090.3 transcript reference sequence.

27 entries on 1 page. Showing entries 1 - 27.
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Effect     

Exon     

AscendingDNA change (cDNA)     

RNA change     

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Legacy protein change     

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DNA change (genomic) (hg19)     

DNA change (hg38)     

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DB-ID     

Variant remarks     

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ClinVar ID     

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Owner     
+/+ - c.547G>A r.(?) p.(Gly183Ser) missense - - Parent #1 - pathogenic g.189852825G>A g.188988099G>A - - COL3A1_000006 1 heterozygous, no homozygous; Clinindb (India) PubMed: Narang 2020, Journal: Narang 2020 - rs121912926 Germline - 1/2780 individuals - - - DNA arraySNP - Infinium Global Screening Array v1.0 ? - PubMed: Narang 2020, Journal: Narang 2020 analysis 2794 individuals (India) - - India - - - - - 1 Mohammed Faruq
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Pepin et al., 2000 PubMed: Pepin et al., 2014 - - Unknown - - - - - RNA RT-PCR, SEQ, SSCA - - EDS, EDSVASC - PubMed: Pepin et al., 2000 PubMed: Pepin et al., 2014 - - - - - - - - - 1 Peter Byers
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Pepin et al., 2000 PubMed: Pepin et al., 2014 - - Unknown - - - - - RNA RT-PCR, SEQ, SSCA - - EDS, EDSVASC - PubMed: Pepin et al., 2000 PubMed: Pepin et al., 2014 - - - - - - - - - 1 Peter Byers
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Pepin et al., 2000 PubMed: Pepin et al., 2014 - - Unknown - - - - - RNA RT-PCR, SEQ, SSCA - - EDS, EDSVASC - PubMed: Pepin et al., 2000 PubMed: Pepin et al., 2014 - - - - - - - - - 1 Peter Byers
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Pepin et al., 2000 PubMed: Pepin et al., 2014 - - Unknown - - - - - RNA RT-PCR, SEQ, SSCA - - EDS, EDSVASC - PubMed: Pepin et al., 2000 PubMed: Pepin et al., 2014 - - - - - - - - - 1 Peter Byers
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Pepin et al., 2000 PubMed: Pepin et al., 2014 - - Unknown - - - - - RNA RT-PCR, SEQ, SSCA - - EDS, EDSVASC - PubMed: Pepin et al., 2000 PubMed: Pepin et al., 2014 - - - - - - - - - 1 Peter Byers
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Pepin et al., 2000 PubMed: Pepin et al., 2014 - - Unknown - - - - - RNA RT-PCR, SEQ, SSCA - - EDS, EDSVASC - PubMed: Pepin et al., 2000 PubMed: Pepin et al., 2014 - - - - - - - - - 1 Peter Byers
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Pepin et al., 2000 PubMed: Pepin et al., 2014 - - Unknown - - - - - RNA RT-PCR, SEQ, SSCA - - EDS, EDSVASC - PubMed: Pepin et al., 2000 PubMed: Pepin et al., 2014 - - - - - - - - - 1 Peter Byers
?/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - - - - Unknown - - - - - DNA SEQ - - EDS, EDSVASC P002 - - - - - white - - - - 1 Javier Garcia-Planells
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Mortani Barbosa et al., 2011 - - Unknown - - - - - ? ? - - EDS, EDSVASC Patient 2 PubMed: Mortani Barbosa et al., 2011 The protein level variant description is incorrectly described as p.G16S. - - - - - - - - 1 Raymond Dalgleish
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Frank et al., 2015 - - Unknown - - - - - DNA SEQ - - EDS, EDSVASC - PubMed: Frank et al., 2015 This patient was subsequently described in PubMed: Legrand et al., 2019. - - - - - - - - 1 Xavier Jeunemaitre
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Kerwin et al., 2008 PubMed: Pepin et al., 2014 - - Unknown - - - - - DNA, RNA PCR, RT-PCR, SEQ - - EDS, EDSVASC - PubMed: Kerwin et al., 2008 PubMed: Pepin et al., 2014 This patient was identified as Subject 00-1123 by PubMed: Kerwin et al., 2008. - - - - - - - - 1 Peter Byers
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Pepin et al., 2014 - - Unknown - - - - - DNA SEQ - - EDS, EDSVASC - PubMed: Pepin et al., 2014 de novo - - - - - - - - 1 Peter Byers
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Maternal (inferred) - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Pepin et al., 2014 - - Unknown - - - - - DNA SEQ - - EDS, EDSVASC - PubMed: Pepin et al., 2014 - - - - - - - - - 1 Peter Byers
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Paternal (inferred) - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Pepin et al., 2014 - - Unknown - - - - - DNA, RNA PCR, PCR, RT-PCR, SEQ - - EDS, EDSVASC - PubMed: Pepin et al., 2014 - - - - - - - - - 1 Peter Byers
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Pepin et al., 2014 - - Unknown - - - - - DNA, RNA PCR, RT-PCR, SEQ - - EDS, EDSVASC - PubMed: Pepin et al., 2014 de novo - - - - - - - - 1 Peter Byers
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Pepin et al., 2014 - - Unknown - - - - - DNA, RNA PCR, RT-PCR, SEQ - - EDS, EDSVASC - PubMed: Pepin et al., 2014 de novo - - - - - - - - 1 Peter Byers
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Pepin et al., 2014 - - Unknown - - - - - DNA SEQ - - EDS, EDSVASC - PubMed: Pepin et al., 2014 de novo - - - - - - - - 1 Peter Byers
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Pepin et al., 2014 - - Unknown - - - - - DNA, RNA PCR, RT-PCR, SEQ - - EDS, EDSVASC - PubMed: Pepin et al., 2014 - - - - - - - - - 1 Peter Byers
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Pepin et al., 2014 - - Unknown - - - - - DNA, RNA PCR, RT-PCR, SEQ - - EDS, EDSVASC - PubMed: Pepin et al., 2014 affected sib - - - - - - - - 1 Peter Byers
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Pepin et al., 2014 - - Unknown - - - - - DNA SEQ - - EDS, EDSVASC - PubMed: Pepin et al., 2014 - - - - - - - - - 1 Peter Byers
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - PubMed: Pepin et al., 2014 - - Unknown - - - - - DNA, RNA PCR, RT-PCR, SEQ - - EDS, EDSVASC - PubMed: Pepin et al., 2014 - - - - - - - - - 1 Peter Byers
+/+ 7 c.547G>A r.? p.(Gly183Ser) missense substitution Gly16Ser Unknown - pathogenic g.189852825G>A - - - COL3A1_000006 - - - - Unknown - - - - - DNA SEQ - - EDS, EDSVASC - - This patient was subsequently described in PubMed: Legrand et al., 2019. - - - - - - - - 1 Xavier Jeunemaitre
+/+ 7 c.547G>A r.(?) p.(Gly183Ser) missense substitution Gly16Ser Unknown ACMG pathogenic g.189852825G>A g.188988099G>A - - COL3A1_000006 - PubMed: Yamaguchi et al., 2022 - - Germline ? - - - - DNA SEQ-NG peripheral blood - EDSVASC 1 PubMed: Yamaguchi et al., 2022 - F ? - - - - - - 1 Oumaima Nehaili
+/+ 7 c.547G>A r.(?) p.(Gly183Ser) missense substitution Gly16Ser Unknown ACMG pathogenic g.189852825G>A g.188988099G>A - - COL3A1_000006 - PubMed: Yamaguchi et al., 2022 - - Germline - - - - - DNA SEQ-NG peripheral blood - EDSVASC 2 PubMed: Yamaguchi et al., 2022 - F ? - - - - - - 1 Oumaima Nehaili
+/. - c.547G>A r.(?) p.(Gly183Ser) - - - Unknown - pathogenic (dominant) g.189852825G>A g.188988099G>A - - COL3A1_000006 - - - - Germline/De novo (untested) - - - - - DNA SEQ-NG - blood EDSVASC 76* - Proband F - United Kingdom (Great Britain) - - - - - 1 Duncan Baker
+/+ - c.547G>A r.(?) p.(Gly183Ser) missense substitution - Unknown - likely pathogenic (dominant) g.189852825G>A - - - COL3A1_000006 - - - - Not applicable - - - - - DNA SEQ-NG-I - - EDSVASC - - - - - - - - - - - 1 Lucia Micale
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