Full data view for gene COL3A1

Ehlers Danlos Syndrome Variant Database


Information The variants shown are described using the NM_000090.3 transcript reference sequence.

8 entries on 1 page. Showing entries 1 - 8.
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Effect     

Exon     

AscendingDNA change (cDNA)     

RNA change     

Protein     

Predicted     

Type/DNA     

Legacy protein change     

Allele     

Classification method     

Clinical classification     

DNA change (genomic) (hg19)     

DNA change (hg38)     

Published as     

ISCN     

DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

Origin     

Segregation     

Frequency     

Re-site     

VIP     

Methylation     

Template     

Technique     

Tissue     

Remarks     

Disease     

ID_report     

Reference     

Remarks     

Gender     

Consanguinity     

Country     

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Age at death     

VIP     

Data_av     

Treatment     

Panel size     

Owner     
-?/. - c.2002C>A r.(?) p.(Pro668Thr) - - - Unknown - likely benign g.189863424C>A g.188998698C>A COL3A1(NM_000090.3):c.2002C>A (p.P668T), COL3A1(NM_000090.4):c.2002C>A (p.P668T) - COL3A1_000136 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
?/. - c.2002C>A r.(?) p.(Pro668Thr) - - - Unknown - VUS g.189863424C>A g.188998698C>A COL3A1(NM_000090.3):c.2002C>A (p.P668T), COL3A1(NM_000090.4):c.2002C>A (p.P668T) - COL3A1_000136 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - c.2002C>A r.(?) p.(Pro668Thr) - - - Unknown - likely benign g.189863424C>A g.188998698C>A COL3A1(NM_000090.3):c.2002C>A (p.P668T), COL3A1(NM_000090.4):c.2002C>A (p.P668T) - COL3A1_000136 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - c.2002C>A r.(?) p.(Pro668Thr) - - - Unknown - likely benign g.189863424C>A g.188998698C>A COL3A1(NM_000090.3):c.2002C>A (p.P668T), COL3A1(NM_000090.4):c.2002C>A (p.P668T) - COL3A1_000136 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - c.2002C>A r.(?) p.(Pro668Thr) - - - Unknown - likely benign g.189863424C>A g.188998698C>A COL3A1(NM_000090.3):c.2002C>A (p.P668T), COL3A1(NM_000090.4):c.2002C>A (p.P668T) - COL3A1_000136 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-/- 30 c.2002C>A r.? p.(Pro668Thr) missense substitution Pro501Thr Unknown - likely benign g.189863424C>A - - - COL3A1_000136 - PubMed: Tromp et al., 1993 - - Unknown - - - - - RNA RT-PCR, SEQ - - ? - PubMed: Tromp et al., 1993 This is a non-pathogenic variant. - - - - - - - - 1 Raymond Dalgleish
-/- 30 c.2002C>A r.? p.(Pro668Thr) missense substitution - Unknown - likely benign g.189863424C>A - - - COL3A1_000136 - - - - Unknown - - - - - DNA SEQ-NG - - EDS, EDSHMB, TAAD - - Other HDCT (phenotype largely outside EDS spectrum) with vascular phenotype: Marfanoid hypermobility, joint pain, soft thin skin, aortic dilatation, colitis - - - white - - - - 1 Ruwan Weerakkody
-?/-? 30 c.2002C>A r.? p.(Pro668Thr) missense substitution Pro501Thr Unknown - benign g.189863424C>A - - - COL3A1_000136 - PubMed: Ziganshin et al., 2015 - - Unknown - - - - - DNA SEQ-NG - - TAAD Patient 8 PubMed: Ziganshin et al., 2015 The variant in this patient is described as being of Unknown significance.The technique used was whole exome sequencing. - - - - - - - - 1 Raymond Dalgleish
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