Full data view for gene PLOD1

Ehlers Danlos Syndrome Variant Database


Information The variants shown are described using the NM_000302.3 transcript reference sequence.

7 entries on 1 page. Showing entries 1 - 7.
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+/. - c.1533C>G r.(?) p.(Tyr511*) - - Parent #2 - pathogenic (recessive) g.12025599C>G g.11965542C>G - - PLOD1_000012 RNA allele imbalance PubMed: Cummings 2017 - - Germline - - - - - DNA RT-PCR, SEQ, SEQ-NG - WES MD PatD12 PubMed: Cummings 2017 - - - - - - - - - 1 Johan den Dunnen
+/+ 14 c.1533C>G r.(?) p.(Tyr511*) nonsense substitution Maternal (confirmed) - pathogenic g.12025599C>G - - - PLOD1_000012 - PubMed: Pousi et al., 2000 - - Unknown - - +NheI, +Bfal - - DNA, RNA PCR, RT-PCR, SEQ - - EDS, EDSKSCL1 - PubMed: Pousi et al., 2000 The maternally inherited exon-14 PTC mutation also results in abnormal splicing with exon 14 being commonly skipped. This results in deletion of 38-amino acid deletion. The mutation on the paternal allele and how it causes low-level expression is still not known. - - United Kingdom (Great Britain) British - - - - 1 Raymond Dalgleish
+/+ 14 c.1533C>G r.(?) p.(Tyr511*) nonsense substitution Both (homozygous) - pathogenic g.12025599C>G - - - PLOD1_000012 - PubMed: Walker et al., 1999 - - Unknown - - +NheI, +Bfal - - DNA, RNA PCR, RT-PCR, SEQ - - EDS, EDSKSCL1 - PubMed: Walker et al., 1999 The father's DNA was unavailable for analysis. The mother was 14 years old when the patient was born. Although there is a high likelihood of consanguinity, the father has not been unequivocally identified. The PLOD1 variant is incorrectly described in PubMed: Walker et al., 1999 as 1557C>G. This is due to incorrect use of an alternative PLOD1 mRNA sequnece: GenBank accession no. M98252. This patient is described in PubMed: Yeowell et al., 2000 and also in PubMed: Yeowell et al., 2000 as cell line 1122. - - - - - - - - 1 Raymond Dalgleish
+/+ 14 c.1533C>G r.(?) p.(Tyr511*) nonsense substitution Both (homozygous) - pathogenic g.12025599C>G - - - PLOD1_000012 - PubMed: Yeowell et al., 2000 - - Unknown - - +NheI, +Bfal - - DNA, RNA PCR, RT-PCR, SEQ - - EDS, EDSKSCL1 - PubMed: Yeowell et al., 2000 The PLOD1 variant is incorrectly described as 1557C>G in PubMed: Yeowell et al., 2000. This is due to incorrect use of an alternative PLOD1 mRNA sequnece: GenBank accession no. M98252. - - United States North American - - - - 1 Raymond Dalgleish
+/+ 14 c.1533C>G r.(?) p.(Tyr511*) nonsense substitution Parent #2 - pathogenic g.12025599C>G - - - PLOD1_000012 - PubMed: Yeowell et al., 2000 - - Unknown - - +NheI, +Bfal - - DNA, RNA PCR, RT-PCR, SEQ - - EDS, EDSKSCL1 - PubMed: Yeowell et al., 2000 The PLOD1 substitution variant is incorrectly described as 1557C>G in PubMed: Yeowell et al., 2000. This is due to incorrect use of an alternative PLOD1 mRNA sequence: GenBank accession no. M98252. - - United States North American - - - - 1 Raymond Dalgleish
+/+ 14 c.1533C>G r.(?) p.(Tyr511*) nonsense substitution Paternal (confirmed) - pathogenic g.12025599C>G - - - PLOD1_000012 - PubMed: Yeowell and Walker, 1997 - - Unknown - - +NheI, +Bfal - - DNA PCR, SEQ, Southern - - EDS, EDSKSCL1 - PubMed: Yeowell and Walker, 1997 The paternally inherited variant is incorrectly described as c.1557C>G in {PMID9220536:Yeowell and Walker, 1997}. This is due to incorrect use of an alternative PLOD1 mRNA sequence: GenBank accession no. M98252.The patient's unaffected younger sibling was one of the first individuals to have a prenatal assessment of EDS VI by mutational anaylsis. This is reported in {PMID9893157:Yeowell and Walker, 1999}; the outcome of the assessment revealed the foetus had inherited the maternal allele containing the splice-site mutation and a normal non-mutated allele from the father. Although a carrier of this disease, the individual was born healthy.The patient is also described as cell line 996 by PubMed: Yeowell et al., 2000. - - - - - - - - 1 Raymond Dalgleish
+/+ 14 c.1533C>G r.(?) p.(Tyr511*) nonsense substitution Maternal (confirmed) - pathogenic g.12025599C>G - - - PLOD1_000012 - - - - Unknown - - +NheI, +Bfal - - DNA SEQ - - EDS, EDSKSCL1 - - - - - - white - - - - 1 Cecilia Giunta
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