Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Effect: The variant's effect on the function of the gene/protein, displayed in the format 'R/C'. R is the value reported by the source (publication, submitter) and this classification may vary between records. C is the value concluded by the curator. Note that in some database the curator uses Summary records to give details on the classification of the variant.Values used: '+' indicating the variant affects function, '+?' probably affects function, '-' does not affect function, '-?' probably does not affect function, '?' effect unknown, '.' effect was not classified.
Allele: On which allele is the variant located? Does not necessarily imply inheritance! 'Paternal' (confirmed or inferred), 'Maternal' (confirmed or inferred), 'Parent #1' or #2 for compound heterozygosity without having screened the parents, 'Unknown' for heterozygosity without having screened the parents, 'Both' for homozygozity.
DNA change (genomic) (hg19): Description of variant at DNA level, based on the genomic DNA reference sequence (following HGVS recommendations).
- g.12345678C>T
- g.12345678_12345890del
- g.12345678_12345890dup
Marker/Name: name/ID of marker
HGVS/Repeat: variant description using HGVS repeat format
Repeat: structure of the repeat unit
Published_as: variant as originally reported; listed only when different from "DNA change"
Haplotype: haplotype on which variant was found
dbSNP ID: dbSNP ID (rs number), e.g. rs12345678
Reference: Reference to publication describing the variant, including links to OMIM (when available), PubMed or or other source, e.g. "den Dunnen ASHG2003 P2346".
DB-ID: Database ID of variant, grouping multiple observations of the same variant together, starting with the HGNC gene symbol, followed by an underscore (_) and a six digit number (e.g. DMD_012345). _000000 is used for variants where DNA was not analysed (change predicted from RNA analysis), variants seen in animal models or variants not seen in humans but functionally tested in vitro.
Variant remarks: Remarks regarding the variant described, e.g. germline mosaicism in mother, 345 kb deletion, muscle RNA analysed, not in 200 control chromosomes tested, on founder haplotype, etc.
Genetic origin: origin of variant
All options:
- Germline
- De novo
- Somatic
- Unknown
- In vitro (cloned)
- SUMMARY record
- Not applicable
Frequency: frequency variant found; e.g 5/760 chromosomes (in 5 of 760 chromosomes tested), 1/33 patients (in 1 of 33 patients analysed in study), 0.05 controls (in 5% of control cases tested).

 Effect
|

 Chr
|

 DNA change (genomic) (hg19)
|

 Marker/Name
|

 HGVS/Repeat
|

 Repeat
|

 Published_as
|

 Haplotype
|

 dbSNP ID
|

 Reference
|

 DB-ID
|
 Variant remarks
|

 Genetic origin
|

 Frequency
|

 Owner
|
-/- |
1 |
g.230905352_230905429= |
D1S1656 |
g.230905352CA[5]CCTA[1]TCTC[16] |
CA[5]CCTA[1]TCTC[16] |
[TAGA]16TAGG[TG]5 |
D1S1656-17 |
- |
Parson 2016, Parson 2016 |
chr1_000001 |
length capillary electrophoresis 17 |
Germline |
- |
Johan den Dunnen |
-/- |
1 |
g.230905352_230905429= |
D1S1656 |
g.230905352CA[5]CCTA[1]TCTA[16] |
CA[5]CCTA[1]TCTA[16] |
CE17 (TAGA)16(TAGG)1(TG)5 |
D1S1656-17[5-1-0-0-16] |
- |
Lareu 1998 |
chr1_000011 |
- |
Germline |
3/45 chromosomes |
Johan den Dunnen |
-/- |
1 |
g.230905362_230905381del |
D1S1656 |
g.230905352CA[5]TCTA[12] |
CA[5]TCTA[12] |
CE12a (TAGA)12(TG)5 |
D1S1656-12[5-0-0-0-12] |
- |
Lareu 1998 |
chr1_000004 |
- |
Germline |
2/45 chromosomes |
Johan den Dunnen |
-/- |
1 |
g.230905362_230905385del |
D1S1656 |
g.230905352CA[5]TCTA[11] |
CA[5]TCTA[11] |
CE11 (TAGA)11(TG)5 |
D1S1656-11[5-0-0-0-11] |
- |
Lareu 1998 |
chr1_000003 |
- |
Germline |
3/45 chromosomes |
Johan den Dunnen |
-/- |
1 |
g.230905362_230905389del |
D1S1656 |
g.230905352CA[5]TCTA[10] |
CA[5]TCTA[10] |
CE10 (TAGA)10(TG)5 |
D1S1656-10[5-0-0-0-10] |
- |
Lareu 1998 |
chr1_000002 |
- |
Germline |
2/45 chromosomes |
Johan den Dunnen |
-/- |
1 |
g.230905408_230905412del |
D1S1656 |
g.230905352CA[5]CCTA[1]TCTA[10]TCA[1]TCTA[4] |
CA[5]CCTA[1]TCTA[10]TCA[1]TCTA[4] |
CE15.3 (TAGA)4(TGA)1(TAGA)10(TAGG)1(TG)5 |
D1S1656-15.3[5-1-10-1-4] |
- |
Lareu 1998 |
chr1_000009 |
- |
Germline |
4/45 chromosomes |
Johan den Dunnen |
-/- |
1 |
g.230905410_230905429del |
D1S1656 |
g.230905352CA[5]CCTA[1]TCTA[11] |
CA[5]CCTA[1]TCTA[11] |
CE12b (TAGA)11(TAGG)1(TG)5 |
D1S1656-12[5-1-0-0-11] |
- |
Lareu 1998 |
chr1_000005 |
- |
Germline |
3/45 chromosomes |
Johan den Dunnen |
-/- |
1 |
g.230905413_230905415dup |
D1S1656 |
g.230905352CA[5]CCTA[1]TCTA[12]TCA[1]TCTA[4] |
CA[5]CCTA[1]TCTA[12]TCA[1]TCTA[4] |
CE17.3 (TAGA)4(TGA)1(TAGA)12(TAGG)1(TG)5 |
D1S1656-17.3[5-1-12-1-4] |
- |
Lareu 1998 |
chr1_000012 |
- |
Germline |
3/45 chromosomes |
Johan den Dunnen |
-/- |
1 |
g.230905413_230905419dup |
D1S1656 |
g.230905352CA[5]CCTA[1]TCTA[13]TCA[1]TCTA[4] |
CA[5]CCTA[1]TCTA[13]TCA[1]TCTA[4] |
CE18.3 (TAGA)4(TGA)1(TAGA)13(TAGG)1(TG)5 |
D1S1656-18.3[5-1-13-1-4] |
- |
Lareu 1998 |
chr1_000013 |
- |
Germline |
3/45 chromosomes |
Johan den Dunnen |
-/- |
1 |
g.230905413_230905423dup |
D1S1656 |
g.230905352CA[5]CCTA[1]TCTA[14]TCA[1]TCTA[4] |
CA[5]CCTA[1]TCTA[14]TCA[1]TCTA[4] |
CE19.3 (TAGA)4(TGA)1(TAGA)14(TAGG)1(TG)5 |
D1S1656-19.3[5-1-14-1-4] |
- |
Lareu 1998 |
chr1_000014 |
- |
Germline |
3/45 chromosomes |
Johan den Dunnen |
-/- |
1 |
g.230905414_230905429del |
D1S1656 |
g.230905352CA[5]CCTA[1]TCTA[12] |
CA[5]CCTA[1]TCTA[12] |
CE13 (TAGA)12(TAGG)1(TG)5 |
D1S1656-13[5-1-0-0-12] |
- |
Lareu 1998 |
chr1_000006 |
- |
Germline |
4/45 chromosomes |
Johan den Dunnen |
-/- |
1 |
g.230905418_230905429del |
D1S1656 |
g.230905352CA[5]CCTA[1]TCTA[13] |
CA[5]CCTA[1]TCTA[13] |
CE14 (TAGA)13(TAGG)1(TG)5 |
D1S1656-14[5-1-0-0-13] |
- |
Lareu 1998 |
chr1_000007 |
- |
Germline |
5/45 chromosomes |
Johan den Dunnen |
-/- |
1 |
g.230905422_230905429del |
D1S1656 |
g.230905352CA[5]CCTA[1]TCTA[14] |
CA[5]CCTA[1]TCTA[14] |
CE15 (TAGA)14(TAGG)1(TG)5 |
D1S1656-15[5-1-0-0-14] |
- |
Lareu 1998 |
chr1_000008 |
- |
Germline |
7/45 chromosomes |
Johan den Dunnen |
-/- |
1 |
g.230905426_230905429del |
D1S1656 |
g.230905352CA[5]CCTA[1]TCTA[15] |
CA[5]CCTA[1]TCTA[15] |
CE16 (TAGA)15(TAGG)1(TG)5 |
D1S1656-16[5-1-0-0-15] |
- |
Lareu 1998 |
chr1_000010 |
- |
Germline |
3/45 chromosomes |
Johan den Dunnen |
-/- |
2 |
g.1493316C>A |
TPOX |
g.1493423AATG[9] |
AATG[9] |
- |
TPOX-9 [A-CG-G-9] |
- |
van der Gaag 2016 |
chr2_000065 |
- |
Germline |
- |
Pieter Klap |
-/- |
2 |
g.1493328C>T |
TPOX |
g.1493423AATG[8] |
AATG[8] |
CE8-TGAA[8] |
TPOX-8 [C-TG-G-8] |
- |
van der Gaag 2016 |
chr2_000059 |
- |
Germline |
- |
Pieter Klap |
-/- |
2 |
g.1493328C>T |
TPOX |
g.1493423AATG[8] |
AATG[8] |
- |
TPOX-8 [C-TG-G-8] |
- |
van der Gaag 2016 |
chr2_000059 |
- |
Germline |
- |
Pieter Klap |
-/- |
2 |
g.1493329G>A |
TPOX |
g.1493423AATG[8] |
AATG[8] |
CE8-TGAA[8] |
TPOX-8 [C-CA-G-8] |
- |
van der Gaag 2016 |
chr2_000058 |
- |
Germline |
- |
Pieter Klap |
-/- |
2 |
g.1493329G>A |
TPOX |
g.1493423AATG[8] |
AATG[8] |
- |
TPOX-8 [C-CA-G-8] |
- |
van der Gaag 2016 |
chr2_000058 |
- |
Germline |
- |
Pieter Klap |
-/- |
2 |
g.1493329G>A |
TPOX |
g.1493423AATG[9] |
AATG[9] |
- |
TPOX-9 [C-CA-G-9] |
- |
van der Gaag 2016 |
chr2_000058 |
- |
Germline |
- |
Pieter Klap |
-/- |
2 |
g.1493373G>T |
TPOX |
g.1493423AATG[8] |
AATG[8] |
CE8-TGAA[8] |
TPOX-8 [C-CG-T-8] |
- |
van der Gaag 2016 |
chr2_000057 |
- |
Germline |
- |
Pieter Klap |
-/- |
2 |
g.1493373G>T |
TPOX |
g.1493423AATG[8] |
AATG[8] |
- |
TPOX-8 [C-CG-T-8] |
- |
van der Gaag 2016 |
chr2_000057 |
- |
Germline |
- |
Pieter Klap |
-/- |
2 |
g.1493425_14934456= |
TPOX |
g.1493425AATG[8] |
AATG[8] |
TGAA[8] |
TPOX-8 |
- |
van der Gaag 2015 |
chr2_000053 |
length capillary electrophoresis 8 |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.1493425_1493456= |
TPOX |
g.1493423AATG[8] |
AATG[8] |
CE8-TGAA[8] |
TPOX-8 [C-CG-G-8] |
- |
van der Gaag 2016 |
chr2_000055 |
- |
Germline |
- |
Pieter Klap |
-/- |
2 |
g.1493435_1493454dup |
TPOX |
g.1493423AATG[13] |
AATG[13] |
CE13-TGAA[13] |
TPOX-13 [C-CG-G-13] |
- |
van der Gaag 2016 |
chr2_000064 |
- |
Germline |
- |
Pieter Klap |
-/- |
2 |
g.1493439_1493454dup |
TPOX |
g.1493423AATG[12] |
AATG[12] |
CE12-TGAA[12] |
TPOX-12 [C-CG-G-12] |
- |
van der Gaag 2016 |
chr2_000063 |
- |
Germline |
- |
Pieter Klap |
-/- |
2 |
g.1493443_1493454dup |
TPOX |
g.1493423AATG[11] |
AATG[11] |
CE11-TGAA[11] |
TPOX-11 [C-CG-G-11] |
- |
van der Gaag 2016 |
chr2_000062 |
- |
Germline |
- |
Pieter Klap |
-/- |
2 |
g.1493447_1493454del |
TPOX |
g.1493423AATG[6] |
AATG[6] |
CE6-TGAA[6] |
TPOX-6 [C-CG-G-6] |
- |
van der Gaag 2016 |
chr2_000056 |
- |
Germline |
- |
Pieter Klap |
-/- |
2 |
g.1493447_1493454dup |
TPOX |
g.1493423AATG[10] |
AATG[10] |
CE10-TGAA[10] |
TPOX-10 [C-CG-G-10] |
- |
van der Gaag 2016 |
chr2_000061 |
- |
Germline |
- |
Pieter Klap |
-/- |
2 |
g.1493451_1493454dup |
TPOX |
g.1493423AATG[9] |
AATG[9] |
CE9-TGAA[9] |
TPOX-9 [C-CG-G-9] |
- |
van der Gaag 2016 |
chr2_000060 |
- |
Germline |
- |
Pieter Klap |
-/- |
2 |
g.1493451_1493454dup |
TPOX |
g.1493423AATG[9] |
AATG[9] |
CE9-TGAA[9] |
TPOX-9 [A-CG-G-9] |
- |
van der Gaag 2016 |
chr2_000060 |
- |
Germline |
- |
Pieter Klap |
-/- |
2 |
g.1493451_1493454dup |
TPOX |
g.1493423AATG[9] |
AATG[9] |
CE9-TGAA[9] |
TPOX-9 [C-CA-G-9] |
- |
van der Gaag 2016 |
chr2_000060 |
- |
Germline |
- |
Pieter Klap |
-/- |
2 |
g.218879582_218879673= |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[13]GGCA[7] |
GGAA[2]GGAC[1]GGAA[13]GGCA[7] |
TGCC[7]TTCC[13]GTCC[1]TTCC[2] |
D2S1338-23 |
- |
Parson 2016, Parson 2016 |
chr2_000001 |
length capillary electrophoresis 23 |
Germline |
- |
Jamie Zeegers |
-/- |
2 |
g.218879582_218879673= |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[13]GGCA[7] |
GGAA[2]GGAC[1]GGAA[13]GGCA[7] |
CE23-GGAA[2]GGAC[1]GGAA[13]GGCA[7] |
D2S1338-23[C-2-1-13-7] |
- |
vd Gaag, in press |
chr2_000001 |
14/202 Netherlands, 36/194 Nepal/Bhuthan, 5/198 pygmie chromosomes |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.68239080_6823917= |
D2S441 |
g.68239080CTAT[12] |
CTAT[12] |
TCTA[12] |
D2S441-12 |
- |
van der Gaag 2015 |
chr2_000054 |
length capillary electrophoresis 12 |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593C>A;218879648_218879656delinsAAGGA] |
D2S1338 |
g.218879582GGAA[18]GGCA[4] |
GGAA[18]GGCA[4] |
CE22-GGAA[18]GGCA[4] |
D2S1338-22[A-0-0-18-4] |
- |
vd Gaag, in press |
chr2_000052 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593C>A;218879648_218879656delinsA] |
D2S1338 |
g.218879582GGAA[17]GGCA[4] |
GGAA[17]GGCA[4] |
CE21-GGAA[17]GGCA[4] |
D2S1338-21[A-0-0-17-4] |
- |
vd Gaag, in press |
chr2_000029 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593C>A;218879648_218879660delinsA] |
D2S1338 |
g.218879582GGAA[17]GGCA[3] |
GGAA[17]GGCA[3] |
CE20-GGAA[17]GGCA[3] |
D2S1338-20[A-0-0-17-3] |
- |
vd Gaag, in press |
chr2_000020 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593C>A;218879662_218879673del] |
D2S1338 |
g.218879582GGAA[16]GGCA[4 |
GGAA[16]GGCA[4 |
CE20-GGAA[16]GGCA[4 |
D2S1338-20[A-0-0-16-4] |
- |
vd Gaag, in press |
chr2_000021 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593C>A;218879666_218879673del] |
D2S1338 |
g.218879582GGAA[16]GGCA[5] |
GGAA[16]GGCA[5] |
CE21-GGAA[16]GGCA[5] |
D2S1338-21[C-0-0-16-5] |
- |
vd Gaag, in press |
chr2_000031 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879596del;218879620_218879671del] |
D2S1338 |
g.218879582GGAA[8]GGCA[6] |
GGAA[8]GGCA[6] |
CE14-GGAA[8]GGCA[6] |
D2S1338-14[A-0-0-8-6] |
- |
vd Gaag, in press |
chr2_000002 |
- |
Germline |
1/202 chromosomes |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879596del;218879627_218879635delinsA] |
D2S1338 |
g.218879582GGAA[10]GAAA[1]GGAA[2]GGCA[7] |
GGAA[10]GAAA[1]GGAA[2]GGCA[7] |
CE20-GGAA[10]GAAA[1]GGAA[2]GGCA[7] |
D2S1338-20[C-10-1-2-7] |
- |
vd Gaag, in press |
chr2_000026 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879596del;218879644delinsCAGGC] |
D2S1338 |
g.218879582GGAA[14]GGCA[9] |
GGAA[14]GGCA[9] |
CE23-GGAA[14]GGCA[9] |
D2S1338-23[C-0-0-14-9] |
- |
vd Gaag, in press |
chr2_000044 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879596del;218879658_218879673del] |
D2S1338 |
g.218879582GGAA[15]GGCA[3] |
GGAA[15]GGCA[3] |
CE18-GGAA[15]GGCA[3] |
D2S1338-18[A-0-0-15-3] |
- |
vd Gaag, in press |
chr2_000009 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879596del;218879662_218879673del] |
D2S1338 |
g.218879582GGAA[15]GGCA[4] |
GGAA[15]GGCA[4] |
CE19-GGAA[15]GGCA[4] |
D2S1338-19[C-0-0-15-4] |
- |
vd Gaag, in press |
chr2_000014 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879596del;218879670_218879673del] |
D2S1338 |
g.218879582GGAA[15]GGCA[6] |
GGAA[15]GGCA[6] |
CE21-GGAA[15]GGCA[6] |
D2S1338-21[C-0-0-15-6] |
- |
vd Gaag, in press |
chr2_000033 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879596del] |
D2S1338 |
g.218879582GGAA[15]GGCA[7] |
GGAA[15]GGCA[7] |
CE22-GGAA[15]GGCA[7] |
D2S1338-22[C-2-1-12-7] |
- |
vd Gaag, in press |
chr2_000040 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879600del;218879636_218879644delinsC] |
D2S1338 |
g.218879582GGAA[11]GGCA[8] |
GGAA[11]GGCA[8] |
CE19-GGAA[11]GGCA[8] |
D2S1338-19[C-0-0-11-8] |
- |
vd Gaag, in press |
chr2_000019 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879600del;218879640_218879651del] |
D2S1338 |
g.218879582GGAA[12]GGCA[6] |
GGAA[12]GGCA[6] |
CE18-GGAA[12]GGCA[6] |
D2S1338-18[C-0-0-12-6] |
- |
vd Gaag, in press |
chr2_000012 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879600del;218879640_218879651del] |
D2S1338 |
g.218879582GGAA[12]GGCA[6] |
GGAA[12]GGCA[6] |
CE18-GGAA[12]GGCA[6] |
D2S1338-18[A-0-0-12-6] |
- |
vd Gaag, in press |
chr2_000012 |
15/202 Netherlands, 1/198 pygmie chromosomes |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879600del;218879640_218879655del] |
D2S1338 |
g.218879582GGAA[12]GGCA[5] |
GGAA[12]GGCA[5] |
CE17-GGAA[12]GGCA[5] |
D2S1338-17[A-0-0-12-5] |
- |
vd Gaag, in press |
chr2_000007 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879600del;218879640_218879659del] |
D2S1338 |
g.218879582GGAA[12]GGCA[4] |
GGAA[12]GGCA[4] |
CE16-GGAA[12]GGCA[4] |
D2S1338-16[A-0-0-12-4] |
- |
vd Gaag, in press |
chr2_000004 |
- |
Germline |
13/198 chromosomes |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879600del;218879644A>C] |
D2S1338 |
g.218879582GGAA[13]GGCA[8] |
GGAA[13]GGCA[8] |
CE21-GGAA[13]GGCA[8] |
D2S1338-21[C-0-0-13-8] |
- |
vd Gaag, in press |
chr2_000036 |
8/194 Bhutan/Nepal, 6/198 pygmie chromosomes |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879600del;218879644_218879651del] |
D2S1338 |
g.218879582GGAA[13]GGCA[6] |
GGAA[13]GGCA[6] |
CE19-GGAA[13]GGCA[6] |
D2S1338-19[C-0-0-13-6] |
- |
vd Gaag, in press |
chr2_000017 |
1/194 Bhutan/Nepal, 12/198 pygmie chromosomes |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879600del;218879644_218879651del] |
D2S1338 |
g.218879582GGAA[13]GGCA[6] |
GGAA[13]GGCA[6] |
CE19-GGAA[13]GGCA[6] |
D2S1338-19[A-0-0-13-6] |
- |
vd Gaag, in press |
chr2_000017 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879600del;218879644_218879655del] |
D2S1338 |
g.218879582GGAA[13]GGCA[5] |
GGAA[13]GGCA[5] |
CE18-GGAA[13]GGCA[5] |
D2S1338-18[C-0-0-13-5] |
- |
vd Gaag, in press |
chr2_000011 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879600del;218879662_218879673del] |
D2S1338 |
g.218879582GGAA[14]GGCA[4 |
GGAA[14]GGCA[4 |
CE18-GGAA[14]GGCA[4 |
D2S1338-18[A-0-0-14-4] |
- |
vd Gaag, in press |
chr2_000010 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879600del;218879666_218879673del] |
D2S1338 |
g.218879582GGAA[14]GGCA[5] |
GGAA[14]GGCA[5] |
CE19-GGAA[14]GGCA[5] |
D2S1338-19[C-0-0-14-5] |
- |
vd Gaag, in press |
chr2_000015 |
1/202 Netherlands, 2/194 Nepal/Bhuthan, 8/198 pygmie chromosomes |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879600del;218879670_218879673del] |
D2S1338 |
g.218879582GGAA[14]GGCA[6] |
GGAA[14]GGCA[6] |
CE20-GGAA[14]GGCA[6] |
D2S1338-20[C-0-0-14-6] |
- |
vd Gaag, in press |
chr2_000022 |
4/202 Netherlands, 2/194 Nepal/Bhuthan, 14/198 pygmie chromosomes |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879600del;218879670_218879673del] |
D2S1338 |
g.218879582GGAA[14]GGCA[6] |
GGAA[14]GGCA[6] |
CE20-GGAA[14]GGCA[6] |
D2S1338-20[A-0-0-14-6] |
- |
vd Gaag, in press |
chr2_000022 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879600del] |
D2S1338 |
g.218879582GGAA[14]GGCA[7] |
GGAA[14]GGCA[7] |
CE21-GGAA[14]GGCA[7] |
D2S1338-21[C-0-0-14-7] |
- |
vd Gaag, in press |
chr2_000035 |
5/202 Netherlands, 9/194 Nepal/Bhuthan, 8/198 pygmie chromosomes |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879602del;218879632_218879651del] |
D2S1338 |
g.218879582GGAA[10]GGCA[6] |
GGAA[10]GGCA[6] |
CE16-GGAA[10]GGCA[6] |
D2S1338-16[A-0-0-10-6] |
- |
vd Gaag, in press |
chr2_000006 |
- |
Germline |
15/202 chromosomes |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879604del;218879644A>C] |
D2S1338 |
g.218879582GGAA[12]GGCA[8] |
GGAA[12]GGCA[8] |
CE20-GGAA[12]GGCA[8] |
D2S1338-20[C-0-0-12-8] |
- |
vd Gaag, in press |
chr2_000027 |
1/202 Netherlands, 1/198 pygmie chromosomes |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879604del;218879644A>G] |
D2S1338 |
g.218879582GGAA[12]GGGA[1]GGCA[7] |
GGAA[12]GGGA[1]GGCA[7] |
CE20-GGAA[12]GGGA[1]GGCA[7] |
D2S1338-20[C-12-0-G-7] |
- |
vd Gaag, in press |
chr2_000023 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879604del] |
D2S1338 |
g.218879582GGAA[13]GGCA[7] |
GGAA[13]GGCA[7] |
CE20-GGAA[13]GGCA[7] |
D2S1338-20[C-0-0-13-7] |
- |
vd Gaag, in press |
chr2_000025 |
18/202 Netherlands, 22/194 Nepal/Bhuthan, 11/198 pygmie chromosomes |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879608del;218879644_218879651del] |
D2S1338 |
g.218879582GGAA[11]GGCA[6] |
GGAA[11]GGCA[6] |
CE17-GGAA[11]GGCA[6] |
D2S1338-17[C-0-0-11-6] |
- |
vd Gaag, in press |
chr2_000008 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879608del;218879644_218879651del] |
D2S1338 |
g.218879582GGAA[11]GGCA[6] |
GGAA[11]GGCA[6] |
CE17-GGAA[11]GGCA[6] |
D2S1338-17[A-0-0-11-6] |
- |
vd Gaag, in press |
chr2_000008 |
46/202 Netherlands, 8/194 Nepal/Bhuthan, 3/198 pygmie chromosomes |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879608del;218879644_218879655del] |
D2S1338 |
g.218879582GGAA[11]GGCA[5] |
GGAA[11]GGCA[5] |
CE16–GGAA[11]GGCA[5] |
D2S1338-16[C-0-0-11-5] |
- |
vd Gaag, in press |
chr2_000005 |
- |
Germline |
3/198 chromosomes |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879608del] |
D2S1338 |
g.218879582GGAA[12]GGCA[7] |
GGAA[12]GGCA[7] |
CE19-GGAA[12]GGCA[7] |
D2S1338-19[C-0-0-12-7] |
- |
vd Gaag, in press |
chr2_000018 |
12/202 Netherlands, 34/194 Nepal/Bhuthan, 21/198 pygmie chromosomes |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879593_218879612del] |
D2S1338 |
g.218879582GGAA[11]GGCA[7] |
GGAA[11]GGCA[7] |
CE18-GGAA[11]GGCA[7] |
D2S1338-18[C-0-0-11-7] |
- |
vd Gaag, in press |
chr2_000013 |
3/202 Netherlands, 15/194 Nepal/Bhuthan, 8/198 pygmie chromosomes |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879632_218879644delinsC] |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[9]GGCA[8] |
GGAA[2]GGAC[1]GGAA[9]GGCA[8] |
CE20-GGAA[2]GGAC[1]GGAA[9]GGCA[8] |
D2S1338-20[C-2-1-9-8] |
- |
vd Gaag, in press |
chr2_000028 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879636_218879647del] |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[10]GGCA[7] |
GGAA[2]GGAC[1]GGAA[10]GGCA[7] |
CE20-GGAA[2]GGAC[1]GGAA[10]GGCA[7] |
D2S1338-20[C-2-1-10-7] |
- |
vd Gaag, in press |
chr2_000024 |
3/202 Netherlands, 1/194 Nepal/Bhuthan |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879636_218879647dup] |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[16]GGCA[7] |
GGAA[2]GGAC[1]GGAA[16]GGCA[7] |
CE26-GGAA[2]GGAC[1]GGAA[16]GGCA[7] |
D2S1338-26[C-2-1-16-7] |
- |
vd Gaag, in press |
chr2_000051 |
3/202 Netherlands, 1/194 Nepal/Bhuthan, 2/198 pygmie chromosomes |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879636_218879651del] |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[10]GGCA[6] |
GGAA[2]GGAC[1]GGAA[10]GGCA[6] |
CE19-GGAA[2]GGAC[1]GGAA[10]GGCA[6] |
D2S1338-19[C-2-1-10-6] |
- |
vd Gaag, in press |
chr2_000016 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879640_218879644delinsC] |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[11]GGCA[8] |
GGAA[2]GGAC[1]GGAA[11]GGCA[8] |
CE22-GGAA[2]GGAC[1]GGAA[11]GGCA[8] |
D2S1338-22[C-0-0-15-7] |
- |
vd Gaag, in press |
chr2_000041 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879640_218879647del] |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[11]GGCA[7] |
GGAA[2]GGAC[1]GGAA[11]GGCA[7] |
CE21-GGAA[2]GGAC[1]GGAA[11]GGCA[7] |
D2S1338-21[C-2-1-11-7] |
- |
vd Gaag, in press |
chr2_000034 |
1/202 Netherlands, 2/198 pygmie chromosomes |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879640_218879647dup] |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[15]GGCA[7] |
GGAA[2]GGAC[1]GGAA[15]GGCA[7] |
CE25-GGAA[2]GGAC[1]GGAA[15]GGCA[7] |
D2S1338-25[C-2-1-15-7] |
- |
vd Gaag, in press |
chr2_000049 |
29/202 Netherlands, 9/194 Nepal/Bhuthan, 4/198 pygmie chromosomes |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879644_218879647del] |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[12]GGCA[7] |
GGAA[2]GGAC[1]GGAA[12]GGCA[7] |
CE22-GGAA[2]GGAC[1]GGAA[12]GGCA[7] |
D2S1338-22[C-2-1-13-6] |
- |
vd Gaag, in press |
chr2_000039 |
2/202 Netherlands, 5/194 Nepal/Bhuthan, 9/198 pygmie chromosomes |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879644_218879647dup] |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[14]GGCA[7] |
GGAA[2]GGAC[1]GGAA[14]GGCA[7] |
CE24-GGAA[2]GGAC[1]GGAA[14]GGCA[7] |
D2S1338-24[C-2-1-14-7] |
- |
vd Gaag, in press |
chr2_000046 |
19/202 Netherlands, 31/194 Nepal/Bhuthan, 15/198 pygmie chromosomes |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879644_218879651del] |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[12]GGCA[6] |
GGAA[2]GGAC[1]GGAA[12]GGCA[6] |
CE21-GGAA[2]GGAC[1]GGAA[12]GGCA[6] |
D2S1338-21[C-2-1-12-6] |
- |
vd Gaag, in press |
chr2_000032 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879647_218879648delinsAAGGCAGG] |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[14]GGCA[8] |
GGAA[2]GGAC[1]GGAA[14]GGCA[8] |
CE25-GGAA[2]GGAC[1]GGAA[14]GGCA[8] |
D2S1338-25[C-2-1-14-8] |
- |
vd Gaag, in press |
chr2_000050 |
1/202 Netherlands, 1/194 Nepal/Bhuthan |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879648C>A;218879652C>A] |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[15]GGCA[5] |
GGAA[2]GGAC[1]GGAA[15]GGCA[5] |
CE23-GGAA[2]GGAC[1]GGAA[15]GGCA[5] |
D2S1338-23[C-2-1-15-5] |
- |
vd Gaag, in press |
chr2_000042 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879648C>A] |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[14]GGCA[6] |
GGAA[2]GGAC[1]GGAA[14]GGCA[6] |
CE23-GGAA[2]GGAC[1]GGAA[14]GGCA[6] |
D2S1338-23[C-2-1-14-6] |
- |
vd Gaag, in press |
chr2_000043 |
1/202 Netherlands, 1/194 Nepal/Bhuthan |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879648delinsAAGGAAGGA] |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[16]GGCA[6] |
GGAA[2]GGAC[1]GGAA[16]GGCA[6] |
CE25-GGAA[2]GGAC[1]GGAA[16]GGCA[6] |
D2S1338-25[C-2-1-16-6] |
- |
vd Gaag, in press |
chr2_000048 |
2/202 Netherlands, 1/194 Nepal/Bhuthan |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879648delinsAAGGA] |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[15]GGCA[6] |
GGAA[2]GGAC[1]GGAA[15]GGCA[6] |
CE24-GGAA[2]GGAC[1]GGAA[15]GGCA[6] |
D2S1338-24[C-2-1-15-6] |
- |
vd Gaag, in press |
chr2_000045 |
1/202 Netherlands, 1/194 Nepal/Bhuthan, 2/198 pygmie chromosomes |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879648_218879652delinsA] |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[14]GGCA[5] |
GGAA[2]GGAC[1]GGAA[14]GGCA[5] |
CE22-GGAA[2]GGAC[1]GGAA[14]GGCA[5] |
D2S1338-22[A-0-0-18-4] |
- |
vd Gaag, in press |
chr2_000037 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879666_218879673del] |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[13]GGCA[5] |
GGAA[2]GGAC[1]GGAA[13]GGCA[5] |
CE21-GGAA[2]GGAC[1]GGAA[13]GGCA[5] |
D2S1338-21[C-2-1-13-5] |
- |
vd Gaag, in press |
chr2_000030 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879670_218879673del] |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[13]GGCA[6] |
GGAA[2]GGAC[1]GGAA[13]GGCA[6] |
CE22-GGAA[2]GGAC[1]GGAA[13]GGCA[6] |
D2S1338-22[C-2-1-14-5] |
- |
vd Gaag, in press |
chr2_000038 |
2/194 Bhutan/Nepal, 8/198 pygmie chromosomes |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.[218879670_218879673dup] |
D2S1338 |
g.218879582GGAA[2]GGAC[1]GGAA[13]GGCA[8] |
GGAA[2]GGAC[1]GGAA[13]GGCA[8] |
CE24-GGAA[2]GGAC[1]GGAA[13]GGCA[8] |
D2S1338-24[C-2-1-13-8] |
- |
vd Gaag, in press |
chr2_000047 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.218879547C>A |
D2S1338 |
- |
- |
- |
D2S1338-14[A-0-0-8-6] |
rs6736691 |
vd Gaag, in press |
chr2_000003 |
- |
Germline |
1/202 chromosomes |
Johan den Dunnen |
-/- |
2 |
g.218879547C>A |
D2S1338 |
- |
- |
- |
D2S1338-16[A-0-0-12-4] |
rs6736691 |
vd Gaag, in press |
chr2_000003 |
- |
Germline |
3/198 chromosomes |
Johan den Dunnen |
-/- |
2 |
g.218879547C>A |
D2S1338 |
- |
- |
- |
D2S1338-16[A-0-0-11-6] |
rs6736691 |
vd Gaag, in press |
chr2_000003 |
- |
Germline |
15/202 chromosomes |
Johan den Dunnen |
-/- |
2 |
g.218879547C>A |
D2S1338 |
- |
- |
- |
D2S1338-17[A-0-0-12-5] |
rs6736691 |
vd Gaag, in press |
chr2_000003 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.218879547C>A |
D2S1338 |
- |
- |
- |
D2S1338-17[A-0-0-11-6] |
rs6736691 |
vd Gaag, in press |
chr2_000003 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.218879547C>A |
D2S1338 |
- |
- |
- |
D2S1338-18[A-0-0-15-3] |
rs6736691 |
vd Gaag, in press |
chr2_000003 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.218879547C>A |
D2S1338 |
- |
- |
- |
D2S1338-18[A-0-0-14-4] |
rs6736691 |
vd Gaag, in press |
chr2_000003 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.218879547C>A |
D2S1338 |
- |
- |
- |
D2S1338-18[A-0-0-12-6] |
rs6736691 |
vd Gaag, in press |
chr2_000003 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.218879547C>A |
D2S1338 |
- |
- |
- |
D2S1338-19[A-0-0-13-6] |
rs6736691 |
vd Gaag, in press |
chr2_000003 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.218879547C>A |
D2S1338 |
- |
- |
- |
D2S1338-20[A-0-0-17-3] |
rs6736691 |
vd Gaag, in press |
chr2_000003 |
- |
Germline |
- |
Johan den Dunnen |
-/- |
2 |
g.218879547C>A |
D2S1338 |
- |
- |
- |
D2S1338-20[A-0-0-16-4] |
rs6736691 |
vd Gaag, in press |
chr2_000003 |
- |
Germline |
- |
Johan den Dunnen |