Global Variome shared LOVD
LRSAM1 (leucine rich repeat and sterile alpha motif...)
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All individuals with variants in gene LRSAM1
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
ID_report
: ID of the individual that can be publically shared, e.g. as listed in a publication
Reference
: reference to publication describing the individual/family, possibly giving more phenotypic details than listed in this database entry, incl. link to PubMed or other source, e.g. "den Dunnen ASHG2003 P2346"
Remarks
: remarks about the individual
Gender
: gender individual
All options:
? = unknown
- = not applicable
F = female
M = male
rF = raised as female
rM = raised as male
Consanguinity
: indicates whether the parents are related (consanguineous), not related (non-consanguineous) or whether consanguinity is not known (unknown)
All options:
no = non-consanguineous parents
yes = consanguineous parents
likely = consanguinity likely
? = unknown
- = not applicable
Country
: where (country) does the individual live/recently came from. Give additional details (population, specific sub-group) and when parents come from different countries in "Population". Belgium = individual lives in/recently came from Belgium, (France) = reported by laboratory in France, individual's country of origin not sure
All options:
? (unknown)
- (not applicable)
Afghanistan
(Afghanistan)
Albania
(Albania)
Algeria
(Algeria)
American Samoa
(American Samoa)
Andorra
(Andorra)
Angola
(Angola)
Anguilla
(Anguilla)
Antarctica
(Antarctica)
Antigua and Barbuda
(Antigua and Barbuda)
Argentina
(Argentina)
Armenia
(Armenia)
Aruba
(Aruba)
Australia
(Australia)
Austria
(Austria)
Azerbaijan
(Azerbaijan)
Bahamas
(Bahamas)
Bahrain
(Bahrain)
Bangladesh
(Bangladesh)
Barbados
(Barbados)
Belarus
(Belarus)
Belgium
(Belgium)
Belize
(Belize)
Benin
(Benin)
Bermuda
(Bermuda)
Bhutan
(Bhutan)
Bolivia
(Bolivia)
Bosnia and Herzegovina
(Bosnia and Herzegovina)
Botswana
(Botswana)
Bouvet Island
(Bouvet Island)
Brazil
(Brazil)
British Indian Ocean Territory
(British Indian Ocean Territory)
Brunei Darussalam
(Brunei Darussalam)
Bulgaria
(Bulgaria)
Burkina Faso
(Burkina Faso)
Burundi
(Burundi)
Cambodia
(Cambodia)
Cameroon
(Cameroon)
Canada
(Canada)
Cape Verde
(Cape Verde)
Cayman Islands
(Cayman Islands)
Central African Republic
(Central African Republic)
Central Europe
Chad
(Chad)
Chile
(Chile)
China
(China)
Christmas Island
(Christmas Island)
Cocos (Keeling Islands)
(Cocos (Keeling Islands))
Colombia
(Colombia)
Comoros
(Comoros)
Congo
(Congo)
Cook Islands
(Cook Islands)
Costa Rica
(Costa Rica)
Cote D'Ivoire (Ivory Coast)
(Cote D'Ivoire (Ivory Coast))
Croatia (Hrvatska)
(Croatia (Hrvatska))
Cuba
(Cuba)
Cyprus
(Cyprus)
Czech Republic
(Czech Republic)
Denmark
(Denmark)
Djibouti
(Djibouti)
Dominica
(Dominica)
Dominican Republic
(Dominican Republic)
East Timor
(East Timor)
Ecuador
(Ecuador)
Egypt
(Egypt)
El Salvador
(El Salvador)
England
(England)
Equatorial Guinea
(Equatorial Guinea)
Eritrea
(Eritrea)
Estonia
(Estonia)
Ethiopia
(Ethiopia)
Falkland Islands (Malvinas)
(Falkland Islands (Malvinas))
Faroe Islands
(Faroe Islands)
Fiji
(Fiji)
Finland
(Finland)
France
(France)
Gabon
(Gabon)
Gambia
(Gambia)
Georgia
(Georgia)
Germany
(Germany)
Ghana
(Ghana)
Gibraltar
(Gibraltar)
Greece
(Greece)
Greenland
(Greenland)
Grenada
(Grenada)
Guadeloupe
(Guadeloupe)
Guam
(Guam)
Guatemala
(Guatemala)
Guiana, French
(Guiana, French)
Guinea
(Guinea)
Guinea-Bissau
(Guinea-Bissau)
Guyana
(Guyana)
Haiti
(Haiti)
Heard and McDonald Islands
(Heard and McDonald Islands)
Honduras
(Honduras)
Hong Kong
(Hong Kong)
Hungary
(Hungary)
Iceland
(Iceland)
India
(India)
Indonesia
(Indonesia)
Iran
(Iran)
Iraq
(Iraq)
Ireland
(Ireland)
Israel
(Israel)
Italy
(Italy)
Jamaica
(Jamaica)
Japan
(Japan)
Jordan
(Jordan)
Kazakhstan
(Kazakhstan)
Kenya
(Kenya)
Kiribati
(Kiribati)
Korea
(Korea)
Korea, North (People's Republic)
(Korea, North (People's Republic))
Korea, South (Republic)
(Korea, South (Republic))
Kosovo
(Kosovo)
Kuwait
(Kuwait)
Kyrgyzstan (Kyrgyz Republic)
(Kyrgyzstan (Kyrgyz Republic))
Laos
(Laos)
Latvia
(Latvia)
Lebanon
(Lebanon)
Lesotho
(Lesotho)
Liberia
(Liberia)
Libya
(Libya)
Liechtenstein
(Liechtenstein)
Lithuania
(Lithuania)
Luxembourg
(Luxembourg)
Macau
(Macau)
Macedonia
(Macedonia)
Madagascar
(Madagascar)
Malawi
(Malawi)
Malaysia
(Malaysia)
Maldives
(Maldives)
Mali
(Mali)
Mallorca
(Mallorca)
Malta
(Malta)
Marshall Islands
(Marshall Islands)
Martinique
(Martinique)
Mauritania
(Mauritania)
Mauritius
(Mauritius)
Mayotte
(Mayotte)
Mexico
(Mexico)
Micronesia
(Micronesia)
Moldova
(Moldova)
Monaco
(Monaco)
Mongolia
(Mongolia)
Montserrat
(Montserrat)
Morocco
(Morocco)
Mozambique
(Mozambique)
Myanmar
(Myanmar)
Namibia
(Namibia)
Nauru
(Nauru)
Nepal
(Nepal)
Netherlands
(Netherlands)
Netherlands Antilles
(Netherlands Antilles)
Neutral Zone (Saudia Arabia/Iraq)
(Neutral Zone (Saudia Arabia/Iraq))
New Caledonia
(New Caledonia)
New Zealand
(New Zealand)
Nicaragua
(Nicaragua)
Niger
(Niger)
Nigeria
(Nigeria)
Niue
(Niue)
Norfolk Island
(Norfolk Island)
Northern Ireland
(Northern Ireland)
Northern Mariana Islands
(Northern Mariana Islands)
Norway
(Norway)
Oman
(Oman)
Pakistan
(Pakistan)
Palau
(Palau)
Palestine
(Palestine)
Panama
(Panama)
Papua New Guinea
(Papua New Guinea)
Paraguay
(Paraguay)
Peru
(Peru)
Philippines
(Philippines)
Pitcairn
(Pitcairn)
Poland
(Poland)
Polynesia, French
(Polynesia, French)
Portugal
(Portugal)
Puerto Rico
(Puerto Rico)
Qatar
(Qatar)
Reunion
(Reunion)
Romania
(Romania)
Russia
(Russia)
Russian Federation
(Russian Federation)
Rwanda
(Rwanda)
S. Georgia and S. Sandwich Isls.
(S. Georgia and S. Sandwich Isls.)
Saint Kitts and Nevis
(Saint Kitts and Nevis)
Saint Lucia
(Saint Lucia)
Saint Vincent and The Grenadines
(Saint Vincent and The Grenadines)
Samoa
(Samoa)
San Marino
(San Marino)
Sao Tome and Principe
(Sao Tome and Principe)
Saudi Arabia
(Saudi Arabia)
Scotland
(Scotland)
Senegal
(Senegal)
Serbia
(Serbia)
Seychelles
(Seychelles)
Sierra Leone
(Sierra Leone)
Singapore
(Singapore)
Slovakia (Slovak Republic)
(Slovakia (Slovak Republic))
Slovenia
(Slovenia)
Solomon Islands
(Solomon Islands)
Somalia
(Somalia)
South Africa
(South Africa)
Southern Territories, French
(Southern Territories, French)
Soviet Union (former)
(Soviet Union (former))
Spain
(Spain)
Sri Lanka
(Sri Lanka)
St. Helena, Ascension and Tristan da
Cunha
(St. Helena, Ascension and Tristan da
Cunha)
St. Pierre and Miquelon
(St. Pierre and Miquelon)
Sudan
(Sudan)
Sudan, South
(Sudan, South)
Suriname
(Suriname)
Svalbard and Jan Mayen Islands
(Svalbard and Jan Mayen Islands)
Swaziland
(Swaziland)
Sweden
(Sweden)
Switzerland
(Switzerland)
Syria
(Syria)
Taiwan
(Taiwan)
Tajikistan
(Tajikistan)
Tanzania
(Tanzania)
Thailand
(Thailand)
Togo
(Togo)
Tokelau
(Tokelau)
Tonga
(Tonga)
Trinidad and Tobago
(Trinidad and Tobago)
Tunisia
(Tunisia)
Turkey
(Turkey)
Turkmenistan
(Turkmenistan)
Turks and Caicos Islands
(Turks and Caicos Islands)
Tuvalu
(Tuvalu)
Uganda
(Uganda)
Ukraine
(Ukraine)
United Arab Emirates
(United Arab Emirates)
United Kingdom (Great Britain)
(United Kingdom (Great Britain))
United States
(United States)
Uruguay
(Uruguay)
US Minor Outlying Islands
(US Minor Outlying Islands)
Uzbekistan
(Uzbekistan)
Vanuatu
(Vanuatu)
Vatican City State (Holy See)
(Vatican City State (Holy See))
Venezuela
(Venezuela)
Viet Nam
(Viet Nam)
Virgin Islands (British)
(Virgin Islands (British))
Virgin Islands (US)
(Virgin Islands (US))
Wales
(Wales)
Wallis and Futuna Islands
(Wallis and Futuna Islands)
Western Sahara
(Western Sahara)
Yemen
(Yemen)
Yugoslavia
(Yugoslavia)
Zaire
(Zaire)
Zambia
(Zambia)
Zimbabwe
(Zimbabwe)
Population
: population the individual (or ancestors) belongs to; e.g. white, gypsy, Jewish-Ashkenazi, Africa-N, Sardinia, etc.
Age at death
: age at which the individual deceased (when applicable):
35y = 35 years
>43y = still alive at 43y
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
VIP
: individual/phenotype VIP-status was requested for matchmaking - need collaboration(s) to crack the case - please contact the submitter/curator. NOTE: to get VIP status ask the curator.
Data_av
: are additional data available upon request: e.g. pedigree (yes/no/?)
Treatment
: treatment of patient
Variants in genes
: The individual has variants for this gene.
Panel size
: Number of individuals this entry represents; e.g. 1 for an individual, 5 for a family with 5 affected members.
How to query this table
All list views have search fields which can be used to search data. You can search for a complete word or you can search for a part of a search term. If you enclose two or more words in double quotes, LOVD will search for the combination of those words only exactly in the order you specify. Note that search terms are case-insensitive and that wildcards such as * are treated as normal text! For all options, like "and", "or", and "not" searches, or searching for prefixes or suffixes, see the table below.
Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
36 entries on 1 page. Showing entries 1 - 36.
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Legend
How to query
Individual ID
ID_report
Reference
Remarks
Gender
Consanguinity
Country
Population
Age at death
VIP
Data_av
Treatment
Disease
Phenotype details
Variants
Panel size
Owner
00080827
-
PubMed: Trujillano 2017
unaffected heterozygous carrier mother, father not available
-
-
-
-
-
-
-
-
CMT2P
Charcot-Marie-Tooth disease, axonal, type 2P (OMIM:614436)
1
1
Daniel Trujillano
00210165
-
-
-
M
-
Germany
-
-
-
-
-
-
HP:0002460 (Distal muscle weakness); HP:0003198 (Myopathy)
1
1
Andreas Laner
00218353
20865121-Fam
PubMed: Guernsey 2010
6-generation family, 7 affected (F, 6m), unaffected heterozygous carrier parents/relatives
F;M
yes
Canada
Canadian, rural eastern
-
-
-
-
CMT
see paper; similar to autosomal recessive axonal CMT
1
7
Johan den Dunnen
00218354
22012984-Fam
PubMed: Weterman 2012
,
PubMed: Aerts 2015
3-generation family, 11 affected (5F, 6M) heterozygous carriers
F;M
no
Netherlands
-
-
-
-
-
CMT
see paper; phenotype includes late-onset Parkinson’s disease, ...
1
11
Johan den Dunnen
00218356
22781092
PubMed: Nicolaou 2013
6-generation family, 22 affected heterozygous carriers (10F, 12M)
F;M
-
Italy
Sardian
-
-
-
-
CMT
see paper; ...
1
22
Johan den Dunnen
00218357
27686364-Fam
PubMed: Peeters 2016
2-generation family, 13 affected heterozygous carriers (6F, 7M)
F;M
no
Spain
-
-
-
-
-
CMT
see paper; mild and quiescent lower-limb axonal sensorimotor neuropathy; MRI lower-limb musculature shows fatty atrophy, ...
1
13
Johan den Dunnen
00218361
29341362-Fam
PubMed: Zhao 2018
4-generation family, 6 affected heterozygous carriers (F, 5M)
F;M
no
China
-
-
-
-
-
CMT
see paper; difficulty walking, slowly progressive weakness lower limbs, atrophy distal parts lower limbs (III1), tendon reflexes depressed or absent, with mild stocking sensory loss to pricking pain or vibration feet, talipes cavus deformity (II4), no clawhand deformity, numbness and tingling in feet, no cranial nerve involvement, no cerebellar or pyramidal signs, ...
1
6
Johan den Dunnen
00218376
27615052_Fam
PubMed: Hu 2016
4-generation family, 8 affected heterozygous carriers (4F, 4M)
F;M
no
United States
-
-
-
-
-
CMT
see paper; ...
1
8
Johan den Dunnen
00218377
24894446-Fam
PubMed: Engeholm 2014
4-generation family, 3 affected heterozygous carriers (2F, M)
F;M
no
Germany
-
-
-
-
-
CMT
see paper; axonal CMT, ...
1
3
Johan den Dunnen
00219001
28902413-Pat11
PubMed: Dohrn 2017
,
Journal: Dohrn 2017
analysis 612 patients
F
-
(Germany)
-
-
-
-
-
CMT
CMT2P
1
1
Johan den Dunnen
00240384
-
-
-
F
-
-
-
-
-
-
-
?
Cerebellar atrophy (HP:0001272); Polyneuropathy (HP:0001271); Sensory ataxia (HP:0010871)
2
1
IMGAG
00295655
-
-
-
F
-
-
-
-
-
-
-
?
Peripheral axonal neuropathy (HP:0003477); Pes cavus (HP:0001761)
1
1
Andreas Laner
00306993
-
-
-
M
-
-
-
-
-
-
-
?
Multifocal epileptiform discharges (HP:0010841); Abnormality of muscle physiology (HP:0011804); Seizures (HP:0001250); Muscular hypotonia (HP:0001252); Spasticity (HP:0001257); Global developmental delay (HP:0001263); Abnormality of nervous system physiology (HP:0012638); Neurodevelopmental abnormality (HP:0012759); Hypertonia (HP:0001276); Dystonia (HP:0001332); Generalized myoclonic seizures (HP:0002123); EEG abnormality (HP:0002353); Abnormality of the musculature (HP:0003011); Muscular dystrophy (HP:0003560); Hearing impairment (HP:0000365); Abnormal muscle tone (HP:0003808)
1
1
Andreas Laner
00306995
-
-
-
M
-
-
-
-
-
-
-
?
Bilateral ptosis (HP:0001488); Myopathy (HP:0003198)
1
1
Andreas Laner
00306996
-
-
-
M
-
-
-
-
-
-
-
?
Paraplegia/paraparesis (HP:0010551); Skeletal muscle atrophy (HP:0003202)
1
1
Andreas Laner
00306997
-
-
-
M
-
-
-
-
-
-
-
?
Peripheral axonal neuropathy (HP:0003477); Limb-girdle muscle atrophy (HP:0003797); Sensorimotor neuropathy (HP:0007141)
1
1
Andreas Laner
00306998
-
-
-
F
-
-
-
-
-
-
-
?
Renal cyst (HP:0000107); Polyneuropathy (HP:0001271); Rheumatoid arthritis (HP:0001370); Transient ischemic attack (HP:0002326); Hashimoto thyroiditis (HP:0000872); Tibialis muscle weakness (HP:0008963)
1
1
Andreas Laner
00306999
-
-
-
F
-
-
-
-
-
-
-
?
Abnormality of nervous system morphology (HP:0012639); Sensorimotor neuropathy (HP:0007141)
2
1
Andreas Laner
00307000
-
-
-
M
-
-
-
-
-
-
-
?
Abnormal peripheral nervous system morphology (HP:0000759); Sensory neuropathy (HP:0000763)
1
1
Andreas Laner
00307001
-
-
-
M
-
-
-
-
-
-
-
?
Mixed demyelinating and axonal polyneuropathy (HP:0007327)
1
1
Andreas Laner
00307002
-
-
-
M
-
-
-
-
-
-
-
?
Lower limb pain (HP:0012514); Gait disturbance (HP:0001288); Pes cavus (HP:0001761); Hand tremor (HP:0002378); Muscle stiffness (HP:0003552); Limb fasciculations (HP:0007289)
1
1
Andreas Laner
00307003
-
-
-
M
-
-
-
-
-
-
-
?
Muscle cramps (HP:0003394); Paresthesia (HP:0003401); Peripheral axonal neuropathy (HP:0003477)
1
1
Andreas Laner
00307004
-
-
-
M
-
-
-
-
-
-
-
?
Ataxia (HP:0001251)
1
1
Andreas Laner
00307005
-
-
-
M
-
-
-
-
-
-
-
?
Peripheral neuropathy (HP:0009830)
1
1
Andreas Laner
00307006
-
-
-
M
-
-
-
-
-
-
-
?
Elevated serum creatine phosphokinase (HP:0003236); Muscular dystrophy (HP:0003560)
1
1
Andreas Laner
00307007
-
-
-
M
-
-
-
-
-
-
-
?
Vitamin B12 deficiency (HP:0100502); Vitamin D deficiency (HP:0100512); Abnormal enzyme/coenzyme activity (HP:0012379); Obesity (HP:0001513); Hypomagnesemia (HP:0002917); Depression (HP:0000716)
1
1
Andreas Laner
00307128
-
-
submission for publication Reilich et al, 2020 (submitted)
?
?
-
-
-
-
-
-
CMT2P
Distal limb muscle weakness due to peripheral neuropathy
1
1
Andreas Laner
00307129
105556
-
submission for publication Reilich et al, 2020 (submitted)
F
?
-
-
-
-
-
-
CMT2P
Weakness of foot dorsiflexion and lowering since the 30th year of life, distally emphasized sensorimotor axonal PNP. FA: Brother of the father also PNP since 70th year, father died with 29 years without symptoms of PNP, daughter also affected (known since 28th year)
1
1
Andreas Laner
00307130
-
-
submission for publication Reilich et al, 2020 (submitted)
?
?
-
-
-
-
-
-
CMT2P
Axonal degeneration/regeneration on nerve biops
1
1
Andreas Laner
00307131
-
-
submission for publication Reilich et al, 2020 (submitted)
?
?
-
-
-
-
-
-
CMT2P
Distal sensory loss, Foot drop
1
1
Andreas Laner
00307132
140851
submission for publication Reilich et al, 2020 (submitted)
-
M
?
Germany
-
-
-
-
-
CMT2P
Hereditary polyneuropathy, sensorimotor primary axonal PNP (sensory > motor), father also affected
1
1
Andreas Laner
00307137
-
submission for publication Reilich et al, 2020 (submitted)
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?
?
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CMT2P
Hereditary polyneuropathy
1
1
Andreas Laner
00327628
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-
-
-
-
-
-
-
-
-
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CMT2P
-
1
1
Gemeinschaftspraxis für Humangenetik Dresden
00374778
S-1738
PubMed: Ganapathy 2019
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-
-
India
-
-
-
-
-
?
-
1
1
Johan den Dunnen
00374779
S-661
PubMed: Ganapathy 2019
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-
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India
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-
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-
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?
-
1
1
Johan den Dunnen
00420595
-
-
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M
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Germany
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HMSN
-
1
1
Gemeinschaftspraxis für Humangenetik Dresden
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