Full data view for gene APC


Information The variants shown are described using the NM_000038.5 transcript reference sequence.

5809 entries on 59 pages. Showing entries 1 - 100.
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Effect     

Exon     

Exon_old     

AscendingDNA change (cDNA)     

RNA change     

Protein     

Predicted     

Type/DNA     

Allele     

Classification method     

Clinical classification     

DNA change (genomic) (hg19)     

DNA change (hg38)     

Published as     

ISCN     

DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

Origin     

Segregation     

Frequency     

Re-site     

VIP     

Methylation     

Template     

Technique     

Tissue     

Remarks     

Disease     

ID_report     

Reference     

Remarks     

Gender     

Consanguinity     

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Age at death     

VIP     

Data_av     

Treatment     

Panel size     

Owner     
?/. _1 Promotor c.-30461T>G r.(?) p.? - substitution Parent #1 - VUS g.112043180T>G g.112707483T>G -47408T>G - APC_000418 numbering 5' of ATG Variant Error [EREF/ERANGE]: This genomic variant does not match the reference sequence; the transcript variant also has an error. Please fix this entry and then remove this message. - - - Unknown ? - - - - DNA SEQ ? screen APC gene (index patient) FAP1 - - - - - (Germany) - - - ? - 1 Elke Holinski-Feder
+/. - - c.-30421A>C r.(?) p.(=) - - Unknown - pathogenic g.112043220A>C - APC(NM_001127511.3):c.-195A>C - chr5_006485 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
?/. - - c.-30417T>A r.(?) p.(=) - - Unknown - VUS g.112043224T>A - APC(NM_001127511.3):c.-191T>A - chr5_006486 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
+/. - - c.-30417T>C r.(?) p.(=) - - Unknown - pathogenic g.112043224T>C - APC(NM_001127511.3):c.-191T>C - chr5_006487 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - - c.-30410G>C r.(?) p.(=) - - Unknown - likely benign g.112043231G>C - APC(NM_001354895.2):c.-367G>C - APC_001940 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-/. - - c.-30407C>T r.(?) p.(=) - - Unknown - benign g.112043234C>T g.112707537C>T APC(NM_001127511.3):c.-181C>T - APC_001807 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - - c.-30378C>T r.(?) p.(=) - - Unknown - likely benign g.112043263C>T g.112707566C>T APC(NM_001127511.3):c.-152C>T - APC_001808 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-/. - - c.-30374A>C r.(?) p.(=) - - Unknown - benign g.112043267A>C g.112707570A>C APC(NM_001127511.3):c.-148A>C - APC_001809 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
?/? _1 Promotor c.-30361_-30360insG r.(?) p.? - - Parent #1 - VUS g.112043280_112043281insG g.112707583_112707584insG -47307insG - APC_000417 numbering 5' of ATG - - - Unknown ? - - - - DNA SEQ ? screen APC gene (index patient) FAP1 - - - - - (Germany) - - - ? - 1 Elke Holinski-Feder
-?/. - - c.-30360_-30359insG r.(?) p.(=) - - Unknown - likely benign g.112043281_112043282insG g.112707584_112707585insG APC(NM_001127511.3):c.-134_-133insG - APC_001810 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
?/? _1 Promotor c.-30359C>G r.(?) p.? - substitution Parent #1 - VUS g.112043282C>G g.112707585C>G -47306C>G (5' of ATG) - APC_000415 numbering 5' of ATG - - - Unknown ? - - - - DNA SEQ ? screen APC gene (index patient) FAP1 - - - - - (Germany) - - - ? - 1 Elke Holinski-Feder
-/. - - c.-30359C>G r.(?) p.(=) - - Unknown - benign g.112043282C>G g.112707585C>G APC(NM_001127511.3):c.-133C>G - APC_000415 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-/. - - c.-30359C>G r.(?) p.(=) - - Unknown - benign g.112043282C>G - APC(NM_001127511.3):c.-133C>G - APC_000415 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-/. - - c.-30359C>G r.(?) p.(=) - - Unknown - benign g.112043282C>G - APC(NM_001127511.3):c.-133C>G - APC_000415 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - - c.-30358G>T r.(?) p.(=) - - Unknown - likely benign g.112043283G>T g.112707586G>T APC(NM_001127511.3):c.-132G>T - APC_001885 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - - c.-30357G>C r.(?) p.(=) - - Unknown - likely benign g.112043284G>C g.112707587G>C APC(NM_001127511.3):c.-131G>C - APC_001811 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - - c.-30356G>C r.(?) p.(=) - - Unknown - likely benign g.112043285G>C - APC(NM_001354895.2):c.-313G>C - APC_001928 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - - c.-30352dup r.(?) p.(=) - - Unknown - likely benign g.112043289dup g.112707592dup APC(NM_001127511.3):c.-126dupG - APC_001812 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
+/. - - c.-30351del r.(?) p.(=) - - Unknown - pathogenic g.112043290del - APC(NM_001127511.3):c.-125delA - chr5_006488 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - - c.-30345G>A r.(?) p.(=) - - Unknown - likely benign g.112043296G>A - - - chr5_006489 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
?/? _1 Promotor c.-30340C>T r.(?) p.? - substitution Parent #1 - VUS g.112043301C>T g.112707604C>T -47287C>T - APC_000416 numbering 5' of ATG - - - Unknown ? - - - - DNA SEQ ? screen APC gene (index patient) FAP1 - - - - - (Germany) - - - ? - 1 Elke Holinski-Feder
-/. - - c.-30335C>G r.(?) p.(=) - - Unknown - benign g.112043306C>G g.112707609C>G APC(NM_001127511.3):c.-109C>G - APC_001914 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - - c.-30309del r.(?) p.(=) - - Unknown - likely benign g.112043332del g.112707635del APC(NM_001127511.3):c.-83delC - APC_001813 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - - c.-30281C>T r.(?) p.(=) - - Unknown - likely benign g.112043360C>T - APC(NM_001354895.2):c.-238C>T - APC_001955 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-/. - - c.-30257T>G r.(?) p.(=) - - Unknown - benign g.112043384T>G g.112707687T>G APC(NM_001127511.3):c.-31T>G - APC_001814 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-/. - - c.-30257T>G r.(?) p.(=) - - Unknown - benign g.112043384T>G g.112707687T>G APC(NM_001127511.3):c.-31T>G - APC_001814 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
?/. - - c.-30226A>G r.(?) p.(=) - - Unknown - VUS g.112043415A>G - - - APC_001969 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - - c.-30212G>C r.(?) p.(=) - - Unknown - likely benign g.112043429G>C g.112707732G>C - - APC_001815 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - - c.-30200G>C r.(?) p.(=) - - Unknown - likely benign g.112043441G>C - - - APC_001956 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - - c.-30179T>G r.(?) p.(=) - - Unknown - likely benign g.112043462T>G - - - APC_001970 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - - c.-30156C>G r.(?) p.(=) - - Unknown - likely benign g.112043485C>G - - - APC_001929 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-/. - - c.-30149C>A r.(?) p.(=) - - Unknown - benign g.112043492C>A - APC(NM_001127511.2):c.78C>A (p.(Ser26Arg)) - APC_001971 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
?/. - - c.-30140C>T r.(?) p.(=) - - Unknown - VUS g.112043501C>T - APC(NM_001127511.2):c.87C>T (p.(=)) - APC_001972 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - - c.-30108G>C r.(?) p.(=) - - Unknown - likely benign g.112043533G>C g.112707836G>C APC(NM_000038.5):c.-30108G>C (p.(Ser40Thr)), APC(NM_001127511.3):c.119G>C (p.S40T) - APC_001816 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - - c.-30108G>C r.(?) p.(=) - - Unknown - likely benign g.112043533G>C - APC(NM_000038.5):c.-30108G>C (p.(Ser40Thr)), APC(NM_001127511.3):c.119G>C (p.S40T) - APC_001816 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - - c.-30108G>C r.(?) p.(=) - - Unknown - likely benign g.112043533G>C - APC(NM_000038.5):c.-30108G>C (p.(Ser40Thr)), APC(NM_001127511.3):c.119G>C (p.S40T) - APC_001816 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
?/. - - c.-30066G>A r.(?) p.(=) - - Unknown - VUS g.112043575G>A g.112707878G>A APC(NM_001127511.3):c.161G>A (p.W54*) - APC_001817 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - - c.-30064C>A r.(?) p.(=) - - Unknown - likely benign g.112043577C>A - - - APC_001930 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
?/. - - c.-30046G>A r.(?) p.(=) - - Unknown - VUS g.112043595G>A - APC(NM_001127511.2):c.165+16G>A (p.(=)) - APC_002051 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - - c.-30046G>A r.(?) p.(=) - - Unknown - likely benign g.112043595G>A - APC(NM_001127511.2):c.165+16G>A (p.(=)) - APC_002051 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
+/. _1_3i promoter 1B c.-12246_-18-7285delinsTGCTCTATGACCAATT r.(?) p.? deletion, large deletion, large Paternal (confirmed) - pathogenic g.112061395_112083285delinsTGCTCTATGACCAATT g.112725698_112747588delinsTGCTCTATGACCAATT g.112,061,394_112,083,285del 21,890 insTTGCTCTATGACCAATT - APC_001246 - - - - Germline ? - - - - DNA arrayCGH, MLPA, SEQ leukocytes unknown FAP1 - - - M - Bulgaria - - - yes (pedigree) - 1 Tanya Kadiyska
+/. _1 - c.-190G>A r.(?) p.(=) - substitution Paternal (confirmed) - pathogenic g.112073451G>A g.112737754G>A - - APC_001802 - - - - Germline - - - - - DNA SEQ - screen APC gene (index patient) FAP - - - F - United Kingdom (Great Britain) White - - - - 3 Emma Short
+/+ _1_4i 1i+promoter c.-85_(135+1_136-1){0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112090723_112102022)del - -85-?_135+?del - APC_000526 - PubMed: Aretz et al. 2005 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ _1_4i 1i+promoter c.-85_(135+1_136-1){0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112090723_112102022)del - -85-?_135+?del - APC_000526 - PubMed: Aretz et al. 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ _1_4i 1i+promoter c.-85_(135+1_136-1){0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112090723_112102022)del - -85-?_135+?del - APC_000526 - PubMed: Aretz et al. 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ _1_8i 1_5+promoter c.-85_(645+1_646-1){0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112116601_112128142)del - -85-?_645+?del - APC_000527 - PubMed: Aretz et al. 2005 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ _1_8i 1_5+promoter c.-85_(645+1_646-1){0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112116601_112128142)del - -85-?_645+?del - APC_000527 - PubMed: Aretz et al. 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ _1_8i 1_5+promoter c.-85_(645+1_646-1){0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112116601_112128142)del - -85-?_645+?del - APC_000527 - PubMed: Aretz et al. 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - M - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ _1_8i 1_5+promotor c.-85_(645+1_646-1){0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112116601_112128142)del - -85-?_645+?del - APC_000527 - PubMed: Nielsen et al. 2007a; PubMed: Nielsen et al. 2007b - - Germline ? - - - - DNA MLPA, SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Netherlands - - - ? - 1 Stefan Aretz
+/+ _1_10i 1_7i+promoter c.-85_(834+1_835-1){0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112137081_112151191)del - -85-?_834+?del - APC_000528 - PubMed: Aretz et al. 2005 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ _1_10i 1_7i+promoter c.-85_(834+1_835-1){0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112137081_112151191)del - -85-?_834+?del - APC_000528 - PubMed: Aretz et al. 2005 - - Unknown ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - M - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ _1_13i 1_10i+promoter c.-85_(1408+1_1409-1){0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112157689_112162804)del - g.35041-?_119471+?del - APC_000529 - PubMed: Aretz et al. 2005 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ _1_13i 1_10i+promoter c.-85_(1408+1_1409-1){0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112157689_112162804)del - g.35041-?_119471+?del - APC_000529 - PubMed: Aretz et al. 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ _1_13i 1_10i+promoter c.-85_(1408+1_1409-1){0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112157689_112162804)del - g.35041-?_119471+?del - APC_000529 - PubMed: Aretz et al. 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ _1_18_ 1_15+promoter c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del whole gene deletion - APC_000200 Deletion entire APC gene PubMed: Nielsen et al. 2007a - - Germline ? - - - - DNA MLPA leukocytes screen APC gene (index patient) FAP1 - - - F - Netherlands - - - ? - 1 Carli Tops
+/+ _1_18 1_15+promoter c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del cytogenetic deletion - APC_000200 cytogenetic deletion PubMed: Raedle et al. 2001 - - Unknown ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - no (pedigree) - 1 Stefan Aretz
+/+ _1_18 1_15+promoter c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del cytogenetic deletion - APC_000200 cytogenetic deletion PubMed: Aretz et al. 2005 - - De novo ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - no (pedigree) - 1 Stefan Aretz
+/+ _1_18 1_15+promoter c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del cytogenetic deletion - APC_000200 cytogenetic deletion PubMed: Aretz et al. 2005 - - De novo ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - no (pedigree) - 1 Stefan Aretz
+/+ _1_18 1_15+promoter c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del cytogenetic deletion - APC_000200 cytogenetic deletion Aretz and Friedl (unpublished) - - Unknown ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - no (pedigree) - 1 Stefan Aretz
+/+ _1_18_ 1_15+promoter c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del g.35041-?_135250+?del - APC_000200 - Aretz and Friedl (unpublished) - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - F - Austria - - - yes (pedigree) - 1 Stefan Aretz
+/+ _1_18_ 1_15+promoter c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del g.35041-?_135250+?del - APC_000200 - Aretz and Friedl (unpublished) - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - M - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ _1_18_ 1_15+promoter c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del g.35041-?_135250+?del - APC_000200 - Aretz and Friedl (unpublished) - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ _1_18_ 1_15+promoter c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del g.35041-?_135250+?del - APC_000200 - Aretz and Friedl (unpublished) - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ _1_18_ 1_15+promotor c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del g.35041-?_141606+?del - APC_000200 - PubMed: Nielsen et al. 2007a - - De novo ? - - - - DNA MLPA, SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Netherlands - - - ? - 1 Carli Tops
+/+ _1_18_ 1_15+promotor c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del g.35041-?_141606+?del - APC_000200 - PubMed: Nielsen et al. 2007a - - Germline ? - - - - DNA MLPA, SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Netherlands - - - ? - 1 Carli Tops
+/+ _1_18_ 1_15+promotor c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del g.35041-?_141606+?del - APC_000200 - PubMed: Nielsen et al. 2007a - - Germline ? - - - - DNA MLPA, SEQ leukocytes screen APC gene (index patient) FAP1 - - - - - Belgium - - - ? - 1 Carli Tops
+/+ _1_18_ 1_15+promotor c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del g.35041-?_141606+?del - APC_000200 - PubMed: Nielsen et al. 2007a - - Unknown ? - - - - DNA MLPA, SEQ leukocytes screen APC gene (index patient) FAP1 - - - F - Netherlands - - - ? - 1 Carli Tops
+/+ _1_18_ 1_15+promotor c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del g.35041-?_141606+?del - APC_000200 - PubMed: Nielsen et al. 2007a - - Germline ? - - - - DNA MLPA, SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Netherlands - - - ? - 1 Carli Tops
+/+ _1_18_ 1_15+promotor c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del g.35041-?_141606+?del - APC_000200 - PubMed: Nielsen et al. 2007a - - Germline ? - - - - DNA MLPA, SEQ leukocytes screen APC gene (index patient) FAP1 - - - F - Netherlands - - - ? - 1 Carli Tops
+/+ _1_18_ 1_15+promotor c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del g.35041-?_141606+?del - APC_000200 - Carli Tops (unpublished) - - De novo ? - - - - DNA MLPA, SEQ leukocytes screen APC gene (index patient) FAP1 - - - F - Netherlands - - - ? - 1 Carli Tops
+/+ _1_18_ 1_15+promotor c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del g.35041-?_141606+?del - APC_000200 - Carli Tops (unpublished) - - Germline ? - - - - DNA MLPA, SEQ leukocytes screen APC gene (index patient) FAP1 - - - - - Netherlands - - - ? - 1 Carli Tops
+/+ _1_18_ 1_15+promoter c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del g.35041-?_141606+?del - APC_000200 - PubMed: Rivera et al. 2010 - - Germline ? - - - - DNA SEQ - screen APC gene (index patient) FAP1 - Spain, Madrid, Human Genetics Group, Human Cancer Genetics Programme, National Spanish Cancer Research Centre - - - Spain - - - no (pedigree) - 1 Stefan Aretz
+/+ _1_18_ 1_15+promoter c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del g.35041-?_141606+?del - APC_000200 - PubMed: Rivera et al. 2010 - - De novo ? - - - - DNA SEQ - screen APC gene (index patient) FAP1 - Spain, Madrid, Human Genetics Group, Human Cancer Genetics Programme, National Spanish Cancer Research Centre - - - Spain - - - no (pedigree) - 1 Stefan Aretz
+/+ _1_18_ 1_15+promoter c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del g.35041-?_141606+?del - APC_000200 - PubMed: Rivera et al. 2010 - - De novo ? - - - - DNA SEQ - screen APC gene (index patient) FAP1 - Spain, Madrid, Human Genetics Group, Human Cancer Genetics Programme, National Spanish Cancer Research Centre - - - Spain - - - no (pedigree) - 1 Stefan Aretz
+/+ _1_18_ 1_15+promoter c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del g.35041-?_141606+?del - APC_000200 - PubMed: Aceto et al. 2005 - - Germline ? - - - - DNA HD, PTT, SSCA, DHPLC - screen APC gene (index patient) FAP1 - Italy, Chieti, Department of Oncology and Neurosciences, University G. D'Annunzio - - - Italy - - - no (pedigree) - 1 Stefan Aretz
+/+ _1_18_ 1_15+promoter c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del (?_30)_(*220_?)del whole allele - APC_000200 - PubMed: Gómez-Fernández et al. 2009 - - Germline ? - - - - DNA SSCA, SEQ - screen APC gene (index patient) FAP1 - Spain, Santiago de Compostela, Fundación Pública Galega de Medicina Xenómica (FPGMX)-SERGAS, Grupo de Medicina Xenómica (GMX)-USC, CIBERER - - - Spain - - - yes (pedigree) - 1 Stefan Aretz
+/+ _1_18_ 1_15+promoter c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del (?_30)_(*220_?)del whole allele - APC_000200 - PubMed: Gómez-Fernández et al. 2009 - - Unknown ? - - - - DNA SSCA, SEQ - screen APC gene (index patient) FAP1 - Spain, Santiago de Compostela, Fundación Pública Galega de Medicina Xenómica (FPGMX)-SERGAS, Grupo de Medicina Xenómica (GMX)-USC, CIBERER - - - Spain - - - no (pedigree) - 1 Stefan Aretz
+/+ _1_18_ 1_15+promoter c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Unknown - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del [?_30)_(*220_?)del whole allele - APC_000200 - PubMed: Gómez-Fernández et al. 2009 - - Germline ? - - - - DNA SSCA, SEQ - screen APC gene (index patient) FAP1 - Spain, Santiago de Compostela, Fundación Pública Galega de Medicina Xenómica (FPGMX)-SERGAS, Grupo de Medicina Xenómica (GMX)-USC, CIBERER - - - Spain - - - no (pedigree) - 1 Stefan Aretz
+/. _1_18_ _15+promoter c.-85_*2113{0} r.0 p.0 deletion, large deletion, large Maternal (inferred) - pathogenic g.(?_112073556)_(112181936_?)del g.(?_112737859)_(112846239_?)del - - APC_000200 - - - - Germline/De novo (untested) - - - - - DNA MCA, MLPA, PCR, SEQ Blood screen APC gene (index patient) FAP1 - - Mother - colorectal cancer (63 years), aunt (m) - colorectal cancer (66 years) M - Russia - - - - - 1 Grigorij Yanus
-?/. - - c.-18-871T>C r.(=) p.(=) - - Parent #1 - likely benign g.112089699T>C g.112754002T>C - - APC_001905 5 heterozygous, no homozygous; Clinindb (India) PubMed: Narang 2020, Journal: Narang 2020 - rs115198624 Germline - 5/2792 individuals - - - DNA arraySNP - Infinium Global Screening Array v1.0 ? - PubMed: Narang 2020, Journal: Narang 2020 analysis 2794 individuals (India) - - India - - - - - 5 Mohammed Faruq
?/. - - c.-18-2A>G r.spl? p.? - - Unknown - VUS g.112090568A>G - APC(NM_000038.5):c.-18-2A>G (p.(=)) - APC_002052 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
+/+ 3i_4i 4 c.(-19+1_-18-1)_(135+1_136-1)del r.? p.0? deletion, large deletion, large Unknown - pathogenic g.(112073623_112090569)_(112090723_112102022)del - exon 4 deletion - APC_000534 - PubMed: Soravia et al. 1998 - - Germline ? - - - - DNA RT-PCR, PTT, SEQ ? screen APC gene (index patient) FAP1 - Canada, Toronto, Department of Pathology and Laboratory Medicine, Mount Sinai Hospital - F - Canada - - - yes (pedigree) - 1 Stefan Aretz
+/+ 3i_4i 4 c.(-19+1_-18-1)_(135+1_136-1)del r.? p.0? deletion, large deletion, large Unknown - pathogenic g.(112073623_112090569)_(112090723_112102022)del - exon 4 deletion - APC_000534 - PubMed: Soravia et al. 1998 - - Germline ? - - - - DNA RT-PCR, PTT, SEQ ? test known APC variant (relative) FAP1 - Canada, Toronto, Department of Pathology and Laboratory Medicine, Mount Sinai Hospital - M - Canada - - - yes (pedigree) - 1 Stefan Aretz
+/+ 3i_4i 4 c.(-19+1_-18-1)_(135+1_136-1)del r.? p.0? deletion, large deletion, large Unknown - pathogenic g.(112073623_112090569)_(112090723_112102022)del - exon 4 deletion - APC_000534 - PubMed: Soravia et al. 1998 - - Germline ? - - - - DNA RT-PCR, PTT, SEQ ? test known APC variant (relative) FAP1 - Canada, Toronto, Department of Pathology and Laboratory Medicine, Mount Sinai Hospital - F - Canada - - - yes (pedigree) - 1 Stefan Aretz
+/+ 3i_4i 4 c.(-19+1_-18-1)_(135+1_136-1)del r.? p.0? deletion, large deletion, large Unknown - pathogenic g.(112073623_112090569)_(112090723_112102022)del - exon 4 deletion - APC_000534 - PubMed: Soravia et al. 1998 - - Germline ? - - - - DNA RT-PCR, PTT, SEQ ? test known APC variant (relative) FAP1 - Canada, Toronto, Department of Pathology and Laboratory Medicine, Mount Sinai Hospital - M - Canada - - - yes (pedigree) - 1 Stefan Aretz
+/+ 3i_4i 4 c.(-19+1_-18-1)_(135+1_136-1)del r.? p.0? deletion, large deletion, large Unknown - pathogenic g.(112073623_112090569)_(112090723_112102022)del - exon 4 deletion - APC_000534 - PubMed: Soravia et al. 1998 - - Germline ? - - - - DNA RT-PCR, PTT, SEQ ? test known APC variant (relative) FAP1 - Canada, Toronto, Department of Pathology and Laboratory Medicine, Mount Sinai Hospital - F - Canada - - - yes (pedigree) - 1 Stefan Aretz
+/+ 3i_4i 4 c.(-19+1_-18-1)_(135+1_136-1)del r.? p.0? deletion, large deletion, large Unknown - pathogenic g.(112073623_112090569)_(112090723_112102022)del - exon 4 deletion - APC_000534 - PubMed: Soravia et al. 1998 - - Germline ? - - - - DNA RT-PCR, PTT, SEQ ? test known APC variant (relative) FAP1 - Canada, Toronto, Department of Pathology and Laboratory Medicine, Mount Sinai Hospital - F - Canada - - - yes (pedigree) - 1 Stefan Aretz
+/+ 3i_4i 4 c.(-19+1_-18-1)_(135+1_136-1)del r.? p.0? deletion, large deletion, large Unknown - pathogenic g.(112073623_112090569)_(112090723_112102022)del - exon 4 deletion - APC_000534 - PubMed: Soravia et al. 1998 - - Germline ? - - - - DNA RT-PCR, PTT, SEQ ? test known APC variant (relative) FAP1 - Canada, Toronto, Department of Pathology and Laboratory Medicine, Mount Sinai Hospital - F - Canada - - - yes (pedigree) - 1 Stefan Aretz
+/+ 3i_4i 4 c.(-19+1_-18-1)_(135+1_136-1)del r.? p.0? deletion, large deletion, large Unknown - pathogenic g.(112073623_112090569)_(112090723_112102022)del - exon 4 deletion - APC_000534 - PubMed: Soravia et al. 1998 - - Germline ? - - - - DNA RT-PCR, PTT, SEQ ? test known APC variant (relative) FAP1 - Canada, Toronto, Department of Pathology and Laboratory Medicine, Mount Sinai Hospital - M - Canada - - - yes (pedigree) - 1 Stefan Aretz
+/+ 3i_4i 4 c.(-19+1_-18-1)_(135+1_136-1)del r.? p.0? deletion, large deletion, large Unknown - pathogenic g.(112073623_112090569)_(112090723_112102022)del - exon 4 deletion - APC_000534 - PubMed: Soravia et al. 1998 - - Germline ? - - - - DNA RT-PCR, PTT, SEQ ? test known APC variant (relative) FAP1 - Canada, Toronto, Department of Pathology and Laboratory Medicine, Mount Sinai Hospital - F - Canada - - - yes (pedigree) - 1 Stefan Aretz
+/+ 3i_4i 4 c.(-19+1_-18-1)_(135+1_136-1)del r.? p.0? deletion, large deletion, large Unknown - pathogenic g.(112073623_112090569)_(112090723_112102022)del - exon 4 deletion - APC_000534 - PubMed: Soravia et al. 1998 - - Germline ? - - - - DNA RT-PCR, PTT, SEQ ? test known APC variant (relative) FAP1 - Canada, Toronto, Department of Pathology and Laboratory Medicine, Mount Sinai Hospital - M - Canada - - - yes (pedigree) - 1 Stefan Aretz
+/+ 3i_4i 4 c.(-19+1_-18-1)_(135+1_136-1)del r.? p.0? deletion, large deletion, large Unknown - pathogenic g.(112073623_112090569)_(112090723_112102022)del - exon 4 deletion - APC_000534 - PubMed: Soravia et al. 1998 - - Germline ? - - - - DNA RT-PCR, PTT, SEQ ? test known APC variant (relative) FAP1 - Canada, Toronto, Department of Pathology and Laboratory Medicine, Mount Sinai Hospital - M - Canada - - - yes (pedigree) - 1 Stefan Aretz
+/+ 3i_4i 4 c.(-19+1_-18-1)_(135+1_136-1)del r.? p.0? deletion, large deletion, large Unknown - pathogenic g.(112073623_112090569)_(112090723_112102022)del - exon 4 deletion - APC_000534 - PubMed: Soravia et al. 1998 - - Germline ? - - - - DNA RT-PCR, PTT, SEQ ? test known APC variant (relative) FAP1 - Canada, Toronto, Department of Pathology and Laboratory Medicine, Mount Sinai Hospital - F - Canada - - - yes (pedigree) - 1 Stefan Aretz
+/+ 3i_4i 4 c.(-19+1_-18-1)_(135+1_136-1)del r.? p.0? deletion, large deletion, large Unknown - pathogenic g.(112073623_112090569)_(112090723_112102022)del - exon 4 deletion - APC_000534 - PubMed: Soravia et al. 1998 - - Germline ? - - - - DNA RT-PCR, PTT, SEQ ? screen APC gene (index patient) FAP1 - Canada, Toronto, Department of Pathology and Laboratory Medicine, Mount Sinai Hospital - F - Canada - - - yes (pedigree) - 1 Stefan Aretz
+/+ 3i_4i 4 c.(-19+1_-18-1)_(135+1_136-1)del r.? p.0? deletion, large deletion, large Unknown - pathogenic g.(112073623_112090569)_(112090723_112102022)del - exon 4 deletion - APC_000534 - PubMed: Soravia et al. 1998 - - Germline ? - - - - DNA RT-PCR, PTT, SEQ ? test known APC variant (relative) FAP1 - Canada, Toronto, Department of Pathology and Laboratory Medicine, Mount Sinai Hospital - M - Canada - - - yes (pedigree) - 1 Stefan Aretz
+/+ 3i_4i 4 c.(-19+1_-18-1)_(135+1_136-1)del r.? p.0? deletion, large deletion, large Unknown - pathogenic g.(112073623_112090569)_(112090723_112102022)del - exon 4 deletion - APC_000534 - PubMed: Soravia et al. 1998 - - Germline ? - - - - DNA RT-PCR, PTT, SEQ ? test known APC variant (relative) FAP1 - Canada, Toronto, Department of Pathology and Laboratory Medicine, Mount Sinai Hospital - M - Canada - - - yes (pedigree) - 1 Stefan Aretz
+/+ 3i_4i 4 c.(-19+1_-18-1)_(135+1_136-1)del r.? p.0? deletion, large deletion, large Unknown - pathogenic g.(112073623_112090569)_(112090723_112102022)del - exon 4 deletion - APC_000534 - PubMed: Soravia et al. 1998 - - Germline ? - - - - DNA RT-PCR, PTT, SEQ ? test known APC variant (relative) FAP1 - Canada, Toronto, Department of Pathology and Laboratory Medicine, Mount Sinai Hospital - F - Canada - - - yes (pedigree) - 1 Stefan Aretz
+/+ 3i_4i 4 c.(-19+1_-18-1)_(135+1_136-1)del r.? p.0? deletion, large deletion, large Unknown - pathogenic g.(112073623_112090569)_(112090723_112102022)del - exon 4 deletion - APC_000534 - PubMed: Soravia et al. 1998 - - Germline ? - - - - DNA RT-PCR, PTT, SEQ ? test known APC variant (relative) FAP1 - Canada, Toronto, Department of Pathology and Laboratory Medicine, Mount Sinai Hospital - F - Canada - - - yes (pedigree) - 1 Stefan Aretz
+/+ 3i_4i 4 c.(-19+1_-18-1)_(135+1_136-1)del r.? p.0? deletion, large deletion, large Unknown - pathogenic g.(112073623_112090569)_(112090723_112102022)del - exon 4 deletion - APC_000534 - PubMed: Soravia et al. 1998 - - Germline ? - - - - DNA RT-PCR, PTT, SEQ ? test known APC variant (relative) FAP1 - Canada, Toronto, Department of Pathology and Laboratory Medicine, Mount Sinai Hospital - M - Canada - - - yes (pedigree) - 1 Stefan Aretz
+/+ 3i_4i 4 c.(-19+1_-18-1)_(135+1_136-1)del r.? p.0? deletion, large deletion, large Unknown - pathogenic g.(112073623_112090569)_(112090723_112102022)del - exon 4 deletion - APC_000534 - PubMed: Soravia et al. 1998 - - Germline ? - - - - DNA RT-PCR, PTT, SEQ ? test known APC variant (relative) FAP1 - Canada, Toronto, Department of Pathology and Laboratory Medicine, Mount Sinai Hospital - F - Canada - - - yes (pedigree) - 1 Stefan Aretz
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