Full data view for gene APC


Information The variants shown are described using the NM_000038.5 transcript reference sequence.

47 entries on 1 page. Showing entries 1 - 47.
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Effect     

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AscendingDNA change (cDNA)     

RNA change     

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Type/DNA     

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Classification method     

Clinical classification     

DNA change (genomic) (hg19)     

DNA change (hg38)     

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DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

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Methylation     

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Disease     

ID_report     

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Remarks     

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Owner     
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - Vogt and Aretz (unpublished) - - Germline ? - - - - DNA SEQ ? screen APC gene (index patient) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - Vogt and Aretz (unpublished) - - Germline ? - - - - DNA SEQ ? test known APC variant (relative) FAP1 - - - M - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - Vogt and Aretz (unpublished) - - Germline ? - - - - DNA SEQ ? test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - Vogt and Aretz (unpublished) - - Germline ? - - - - DNA SEQ ? test known APC variant (relative) FAP1 - - - M - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - Vogt and Aretz (unpublished) - - Unknown ? - - - - DNA SEQ ? screen APC gene (index patient) FAP1 - - - M - Germany - - - no (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T codon 564, C --> T - APC_000017 - PubMed: Wallis et al. 1999 - - Unknown ? - - - - DNA PTT, RT-PCR, SEQ ? screen APC gene (index patient) FAP1 - United Kingdom, Birmingham, DNA Laboratory, Birmingham Heartlands Hospital - - - United Kingdom (Great Britain) - - - no (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Miyaki et al. 1994; PubMed: Enomoto et al. 2000 - - Unknown ? - - - - DNA SEQ ? screen APC gene (index patient) FAP1 - Japan, Tokyo, Department of Biochemistry, The Tokyo Metropolitan Institute of Medical Science - F - (Japan) - - - no (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T codon 564, CGA --> TGA - APC_000017 - PubMed: Olschwang et al. 1993 - - Unknown ? - - - - DNA DGGE, SEQ ? screen APC gene (index patient) FAP1 - France, Paris, Laboratoire de Génétique des Tumeurs, Institut Curie - - - France - - - no (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Parent #1 - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - - - - Unknown ? - - - - DNA SEQ ? screen APC gene (index patient) FAP1 - - - - - (Germany) - - - ? - 1 Elke Holinski-Feder
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - F - Germany - - - no (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - no (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - De novo ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - M - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - no (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - M - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Unknown ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Unknown ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - no (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Unknown ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - no (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - no (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - - - - Unknown ? - - - - DNA SEQ ? screen APC gene (index patient) FAP1 - - - M - Spain white - - no (pedigree) - 1 Javier Garcia-Planells
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: van der Luijt et al. 1997 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - - - Netherlands - - - ? - 1 Carli Tops
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: van der Luijt et al. 1997; {PMID1324223:Fodde et al. 1992:} - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - - - Netherlands - - - ? - 1 Carli Tops
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - Carli Tops (unpublished) - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - - - Netherlands - - - ? - 1 Carli Tops
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - Carli Tops (unpublished) - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - - - Netherlands - - - ? - 1 Carli Tops
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Mihalatos et al. 2003 - - Germline ? - - - - DNA SEQ - screen APC gene (index patient) FAP1 - Greece, Athens, Molecular Biology Research Center, HYGEIA - M - Greece - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Mihalatos et al. 2003 - - Germline ? - - - - DNA SEQ - test known APC variant (relative) FAP1 - Greece, Athens, Molecular Biology Research Center, HYGEIA - - - Greece - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - PubMed: Mihalatos et al. 2003 - - Germline ? - - - - DNA SEQ - test known APC variant (relative) FAP1 - Greece, Athens, Molecular Biology Research Center, HYGEIA - - - Greece - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Unknown - pathogenic g.112164616C>T g.112828919C>T R564X, CGA>TGA - APC_000017 - PubMed: Gismondi et al. 1997 - - Unknown ? - - - - DNA SSCA, SEQ - screen APC gene (index patient) FAP1 - Italy, Genoa, Advanced Biotechnology Center - - - Italy - - - no (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Parent #1 - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - Aretz and Spier unpublished - - Unknown ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 16 13 c.1690C>T r.(?) p.(Arg564*) nonsense substitution Parent #1 - pathogenic g.112164616C>T g.112828919C>T 1690C>T - APC_000017 - PubMed: Lagarde et al. 2010 - - Unknown ? - - - - DNA SEQ ? screen APC gene (index patient) FAP1 - Centre de Recherche en Cancérologie de Marseille, INSERM UMR891, Marseille, France - - - France - - - no - 1 Stefan Aretz
+/+ 16 - c.1690C>T r.(?) p.(Arg564*) - - Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - - - - Germline - - - - - DNA PCR, SEQ - - CRC - - - - - India Asian - - - - 1 Rajiv Sarin, PhD
+/+ 16 - c.1690C>T r.(?) p.(Arg564*) - - Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 - - - - Germline - - - - - DNA PCR, SEQ - - - - - - - - India Asian - - - - 1 Rajiv Sarin, PhD
+/. - - c.1690C>T r.(?) p.(Arg564*) - - Unknown - pathogenic g.112164616C>T g.112828919C>T - - APC_000017 disruptive variant PubMed: Baert-Desurmont 2018 - - Germline - - - - - DNA SEQ-NG - CRC in family 10 gene panel FAP 29967336-Pat PubMed: Baert-Desurmont 2018 - - - France - - - - - 1 Stephanie Baert-Desurmont
+/. - - c.1690C>T r.(?) p.(Arg564Ter) - - Unknown - pathogenic g.112164616C>T g.112828919C>T APC(NM_000038.5):c.1690C>T (p.(Arg564*)) - APC_000017 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
+?/. - - c.1690C>T r.(?) p.(Arg564*) nonsense - Unknown ACMG likely pathogenic (dominant) g.112164616C>T - - - APC_000017 found in polyp B, VAF: 22% - - - Somatic ? - - - - DNA SEQ-NG-I adenomatous polyps colon 2 independent polys have been analyzed FAP 157360 - For publication Steinke-Lange et al., 2021 M no Germany - - - - - 1 Andreas Laner
+/. - - c.1690C>T r.(?) p.(Arg564Ter) - - Unknown - pathogenic g.112164616C>T - APC(NM_000038.5):c.1690C>T (p.(Arg564*)) - APC_000017 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
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