Full data view for gene APC


Information The variants shown are described using the NM_000038.5 transcript reference sequence.

7 entries on 1 page. Showing entries 1 - 7.
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Effect     

Exon     

Exon_old     

AscendingDNA change (cDNA)     

RNA change     

Protein     

Predicted     

Type/DNA     

Allele     

Classification method     

Clinical classification     

DNA change (genomic) (hg19)     

DNA change (hg38)     

Published as     

ISCN     

DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

Origin     

Segregation     

Frequency     

Re-site     

VIP     

Methylation     

Template     

Technique     

Tissue     

Remarks     

Disease     

ID_report     

Reference     

Remarks     

Gender     

Consanguinity     

Country     

Population     

Age at death     

VIP     

Data_av     

Treatment     

Panel size     

Owner     
+/+ 18 15G c.4012C>T r.(?) p.(Gln1338*) nonsense substitution Unknown - pathogenic g.112175303C>T g.112839606C>T nucleotide 4015, CAG --> TAG - APC_000093 - PubMed: Groden et al. 1993 - - Unknown ? - - - - DNA SSCA, SEQ ? screen APC gene (index patient) FAP1 - USA, Salt Lake City, Howard Hughes Medical Institute, Eccles Institute of Human Genetics, University of Utah - - - United States - - - no (pedigree) - 1 Stefan Aretz
+/+ 18 15G c.4012C>T r.(?) p.(Gln1338*) nonsense substitution Unknown - pathogenic g.112175303C>T g.112839606C>T - - APC_000093 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - no (pedigree) - 1 Stefan Aretz
+/+ 18 15G c.4012C>T r.(?) p.(Gln1338*) nonsense substitution Parent #1 - pathogenic g.112175303C>T g.112839606C>T 4012C>T - APC_000093 - PubMed: Lagarde et al. 2010 - - Unknown ? - - - - DNA SEQ ? screen APC gene (index patient) FAP1 - Centre de Recherche en Cancérologie de Marseille, INSERM UMR891, Marseille, France - - - France - - - no - 1 Stefan Aretz
+/+ 18 - c.4012C>T r.(?) p.(Gln1338*) - - Unknown - pathogenic g.112175303C>T g.112839606C>T - - APC_000093 - - - - Germline - - - - - DNA SEQ - - - - - - - - India Asian - - - - 1 Rajiv Sarin, PhD
+/. - - c.4012C>T r.(?) p.Gln1338* - - Unknown ACMG pathogenic g.112175303C>T g.112839606C>T - - APC_000093 Variant was detected as a 11% (500x coverage) mosaic in blood lymphocytes - - rs121913327 Somatic - - - - - DNA SEQ-NG - - - - - - F - Germany - - - - - 1 Andreas Laner
+/. - - c.4012C>T r.(?) p.(Gln1338Ter) - - Unknown - pathogenic g.112175303C>T g.112839606C>T - - APC_000093 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
+/. 18 15G c.4012C>T r.(?) p.(Gln1338*) nonsense substitution Paternal (inferred) InSiGHT pathogenic g.112175303C>T g.112839606C>T nucleotide 4015, CAG --> TAG - APC_000093 - - 801 rs121913327 Germline - - - - - DNA PCR blood - FAP - - - F no India South-Asian - - - - 1 Rajiv Sarin, PhD
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