Full data view for gene APC


Information The variants shown are described using the NM_000038.5 transcript reference sequence.

36 entries on 1 page. Showing entries 1 - 36.
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Effect     

Exon     

Exon_old     

AscendingDNA change (cDNA)     

RNA change     

Protein     

Predicted     

Type/DNA     

Allele     

Classification method     

Clinical classification     

DNA change (genomic) (hg19)     

DNA change (hg38)     

Published as     

ISCN     

DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

Origin     

Segregation     

Frequency     

Re-site     

VIP     

Methylation     

Template     

Technique     

Tissue     

Remarks     

Disease     

ID_report     

Reference     

Remarks     

Gender     

Consanguinity     

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Population     

Age at death     

VIP     

Data_av     

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Owner     
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T codon 876, CGA --> TGA - APC_000108 - PubMed: Stella et al. 1994 - - Unknown ? - - - - DNA SEQ ? screen APC gene (index patient) FAP1 - Italy, Bari, Cattedra di Genetica Medica, Istituto di Genetica - - - (Italy) - - - no (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T codon 876, CGA --> TGA - APC_000108 - PubMed: Ficari et al. 1999 - - Unknown ? - - - - DNA PTT, RT-PCR, SEQ ? screen APC gene (index patient) FAP1 - Italy, Florence, Unit of Surgery, Department of Clinical Physiopathology and Institute of Anatomic Pathology, University of Florence - - - Italy - - - no (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T codon 876, CGA --> TGA - APC_000108 - PubMed: Miyaki et al. 1994 - - Unknown ? - - - - DNA SEQ ? screen APC gene (index patient) FAP1 - Japan, Tokyo, Department of Biochemistry, The Tokyo Metropolitan Institute of Medical Science - - - (Japan) - - - no (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Parent #1 - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - - - - Unknown ? - - - - DNA SEQ ? screen APC gene (index patient) FAP1 - - - - - (Germany) - - - ? - 1 Elke Holinski-Feder
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - M - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Friedl and Aretz 2005 - - Unknown ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - no (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Friedl and Aretz 2005 - - Unknown ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - no (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Friedl and Aretz 2005 - - Unknown ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Friedl and Aretz 2005 - - Unknown ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - M - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - Carli Tops (unpublished) - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - - - Netherlands - - - ? - 1 Carli Tops
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Kanter-Smoler et al. 2008 - - Unknown ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - Sweden, Gothenburg, Department of Molecular and Clinical Genetics, University of Gothenburg - - - Sweden - - - no (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Kanter-Smoler et al. 2008 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - Sweden, Gothenburg, Department of Molecular and Clinical Genetics, University of Gothenburg - - - Sweden - - - no (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Kanter-Smoler et al. 2008 - - Unknown ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - Sweden, Gothenburg, Department of Molecular and Clinical Genetics, University of Gothenburg - - - Sweden - - - no (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - - - - Unknown ? - - - - DNA SEQ leukocytes screen APC gene (index patient) polyposis - - - M - Italy - - - ? - 1 Maurizio Genuardi
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Plawski et Slomski 2008 - - Unknown ? - - - - DNA MLPA, SSCA, SEQ - screen APC gene (index patient) FAP1 - Poland, Poznan, Institute of Human Genetics, Polish Academy of Sciences - - - Poland - - - no (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Plawski et Slomski 2008 - - Unknown ? - - - - DNA MLPA, SSCA, SEQ - screen APC gene (index patient) FAP1 - Poland, Poznan, Institute of Human Genetics, Polish Academy of Sciences - - - Poland - - - no (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Mihalatos et al. 2003 - - Germline ? - - - - DNA SEQ - screen APC gene (index patient) FAP1 - Greece, Athens, Molecular Biology Research Center, HYGEIA - F - Greece - - - yes (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Mihalatos et al. 2003 - - Germline ? - - - - DNA SEQ - test known APC variant (relative) FAP1 - Greece, Athens, Molecular Biology Research Center, HYGEIA - F - Greece - - - yes (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: Stekrova et al. 2007 - - Unknown ? - - - - DNA DGGE, RT-PCR, PTT, SEQ - screen APC gene (index patient) FAP1 - Czech Republic, Prague, Institute of Biology and Medical Genetics of the 1st Faculty of Medicine and General Teaching Hospital, Charles University - - - Czech Republic - - - no (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - PubMed: DeRosa et al. 2003 - - Unknown ? - - - - DNA RT-PCR, PTT, SSCA, SEQ - screen APC gene (index patient) FAP1 - Italy, Napoli, Dip. Biochimica e Biotecnologie Mediche, Università di Napoli Federico II - - - Italy - - - no (pedigree) - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Parent #1 - pathogenic g.112173917C>T g.112838220C>T 2626C>T - APC_000108 - PubMed: Lagarde et al. 2010 - - Unknown ? - - - - DNA SEQ ? screen APC gene (index patient) FAP1 - Centre de Recherche en Cancérologie de Marseille, INSERM UMR891, Marseille, France - - - France - - - no - 1 Stefan Aretz
+/+ 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Parent #1 - pathogenic g.112173917C>T g.112838220C>T 2626C>T - APC_000108 - - - - Unknown ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - Huntsman Cancer Institute - HGCR, University of Utah, 2000 Circle of Hope Drive, Rm 1132, Salt lake City, Utah 84112 - - - United States - - - yes (pedigree) - 1 Stefan Aretz
+/+ 18 - c.2626C>T r.(?) p.(Arg876*) - - Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 - - - - Somatic - - - - - DNA PCR, SEQ - Sanger sequencing, PCR ? - - no family history of polyposis M - Italy - - - - - 1 Michele Ciavarella
+/. - - c.2626C>T r.(?) p.(Arg876Ter) - - Unknown - pathogenic g.112173917C>T g.112838220C>T - - APC_000108 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
+/. 18 15C c.2626C>T r.(?) p.(Arg876*) nonsense substitution Maternal (inferred) InSiGHT pathogenic g.112173917C>T g.112838220C>T codon 876, CGA --> TGA - APC_000108 - - 216014 rs121913333 Germline - - - - - DNA PCR blood - FAP - - - F no India South-Asian - - - - 1 Rajiv Sarin, PhD
+/. - - c.2626C>T r.(?) p.(Arg876*) nonsense - Unknown ACMG pathogenic (dominant) g.112173917C>T - - - APC_000108 VAF in the 3 polyps ranged from 18-21%, suspected germline mosaicism in colon-tissue - - - Germline ? - - - - DNA SEQ-NG-I colon-polyps 3 independent polyps have been analyzed FAP 128638 - For publication Steinke-Lange et al., 2021 M ? Spain - - - - - 1 Andreas Laner
+/. - - c.2626C>T r.(?) p.(Arg876*) nonsense - Unknown ACMG pathogenic (dominant) g.112173917C>T - - - APC_000108 found in polyp A; VAF: 6% - - - Somatic ? - - - - DNA SEQ-NG-I colon-polyps 2 independent polys have been analyzed FAP 128640 - For publication Steinke-Lange et al., 2021 F - Germany - - - - - 1 Andreas Laner
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