Full data view for gene APC


Information The variants shown are described using the NM_000038.5 transcript reference sequence.

14 entries on 1 page. Showing entries 1 - 14.
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Effect     

Exon     

Exon_old     

AscendingDNA change (cDNA)     

RNA change     

Protein     

Predicted     

Type/DNA     

Allele     

Classification method     

Clinical classification     

DNA change (genomic) (hg19)     

DNA change (hg38)     

Published as     

ISCN     

DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

Origin     

Segregation     

Frequency     

Re-site     

VIP     

Methylation     

Template     

Technique     

Tissue     

Remarks     

Disease     

ID_report     

Reference     

Remarks     

Gender     

Consanguinity     

Country     

Population     

Age at death     

VIP     

Data_av     

Treatment     

Panel size     

Owner     
?/? 12i 9i c.1312+3A>G r.spl? p.? splicing affected substitution Unknown - VUS g.112155044A>G g.112819347A>G codon 438, Agtat --> Agtgt - APC_000254 - PubMed: Olschwang et al. 1993 - - Unknown ? - - - - DNA DGGE, SEQ ? screen APC gene (index patient) FAP1 - France, Paris, Laboratoire de Génétique des Tumeurs, Institut Curie - - - France - - - no (pedigree) - 1 Stefan Aretz
+/+ 12i 9i c.1312+3A>G r.spl? p.? splicing affected substitution Unknown - pathogenic g.112155044A>G g.112819347A>G - - APC_000254 - Vogt and Aretz (unpublished) - - Germline ? - - - - DNA SEQ ? screen APC gene (index patient) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 12i 9i c.1312+3A>G r.[=, 934_1312del] p.? splicing affected substitution Unknown - pathogenic g.112155044A>G g.112819347A>G r.934_1312del (partial) - APC_000254 - PubMed: Aretz et al. 2004 - - Germline ? - - - - DNA, RNA RT-PCR, SEQ leukocytes screen APC gene (index patient) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 12i 9i c.1312+3A>G r.spl? p.? splicing affected substitution Unknown - pathogenic g.112155044A>G g.112819347A>G - - APC_000254 - PubMed: Aretz et al. 2004 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - M - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 12i 9i c.1312+3A>G r.spl? p.? splicing affected substitution Unknown - pathogenic g.112155044A>G g.112819347A>G - - APC_000254 - PubMed: Aretz et al. 2004 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - no (pedigree) - 1 Stefan Aretz
+/+ 12i 9i c.1312+3A>G r.spl? p.? splicing affected substitution Unknown - pathogenic g.112155044A>G g.112819347A>G - - APC_000254 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - - - M - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/+ 12i 9i c.1312+3A>G r.spl? p.? splicing affected substitution Unknown - pathogenic g.112155044A>G g.112819347A>G - - APC_000254 - PubMed: Friedl and Aretz 2005 - - Germline ? - - - - DNA SEQ leukocytes test known APC variant (relative) FAP1 - - - F - Germany - - - yes (pedigree) - 1 Stefan Aretz
+/? 12i 9i c.1312+3A>G r.[=, 934_1312del] p.? splicing affected substitution Unknown - pathogenic g.112155044A>G g.112819347A>G r.934_1312del (partial) - APC_000254 - PubMed: Nielsen et al. 2007b - - Germline ? - - - - DNA, RNA RT-PCR, SEQ leukocytes screen APC gene (index patient) FAP1 - - - - - Netherlands - - - ? - 1 Carli Tops
+/? 12i 9i c.1312+3A>G r.[=, 934_1312del] p.? splicing affected substitution Unknown - pathogenic g.112155044A>G g.112819347A>G r.934_1312del (partial) - APC_000254 - Carli Tops (unpublished) - - Germline ? - - - - DNA, RNA RT-PCR, SEQ leukocytes screen APC gene (index patient) FAP1 - - - - - Netherlands - - - ? - 1 Carli Tops
+/? 12i 9i c.1312+3A>G r.[=, 934_1312del] p.? splicing affected substitution Unknown - pathogenic g.112155044A>G g.112819347A>G r.934_1312del (partial) - APC_000254 - Carli Tops (unpublished) - - Germline ? - - - - DNA, RNA RT-PCR, SEQ leukocytes screen APC gene (index patient) FAP1 - - - - - Netherlands - - - ? - 1 Carli Tops
+/? 12i 9i c.1312+3A>G r.[=, 934_1312del] p.? splicing affected substitution Unknown - pathogenic g.112155044A>G g.112819347A>G r.934_1312del (partial) - APC_000254 - Carli Tops (unpublished) - - Unknown ? - - - - DNA, RNA RT-PCR, SEQ leukocytes screen APC gene (index patient) FAP1 - - - F - Netherlands - - - ? - 1 Carli Tops
+/+ 12i 9i c.1312+3A>G r.spl? p.? splicing affected substitution Parent #1 - pathogenic g.112155044A>G g.112819347A>G 1312+3A>G - APC_000254 - PubMed: Lagarde et al. 2010 - - Unknown ? - - - - DNA SEQ ? screen APC gene (index patient) FAP1 - Centre de Recherche en Cancérologie de Marseille, INSERM UMR891, Marseille, France - - - France - - - no - 1 Stefan Aretz
+?/. i9 - c.1312+3A>G r.spl? p.(? - - Unknown - likely pathogenic g.112155044A>G g.112819347A>G - - APC_000254 published as probably pathogenic, skipping of Ex 9 confirmed PubMed: Olschwang et al. 1993, PubMed: Lagarde et al. 2010, PubMed: Aretz et al. 2004, PubMed: Kerr et al. 2013, PubMed: Grandval et al. 2014 - - Germline - - - - - DNA SEQ-NG-I - - ? - - patient with numerous polyps, mother diffuse gastric cancer M - - - - - pedigree - 1 Elke Holinski-Feder
+/. - - c.1312+3A>G r.spl? p.? - - Unknown - pathogenic g.112155044A>G - - - APC_000254 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
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