Full data view for gene APC


Information The variants shown are described using the NM_000038.5 transcript reference sequence.

15 entries on 1 page. Showing entries 1 - 15.
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Effect     

Exon     

Exon_old     

AscendingDNA change (cDNA)     

RNA change     

Protein     

Predicted     

Type/DNA     

Allele     

Classification method     

Clinical classification     

DNA change (genomic) (hg19)     

DNA change (hg38)     

Published as     

ISCN     

DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

Origin     

Segregation     

Frequency     

Re-site     

VIP     

Methylation     

Template     

Technique     

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Disease     

ID_report     

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VIP     

Data_av     

Treatment     

Panel size     

Owner     
?/? 18 15T c.7504G>A r.(?) p.(Gly2502Ser) missense substitution Parent #1 - VUS g.112178795G>A g.112843098G>A - - APC_000507 - - - rs2229995 Unknown ? - - - - DNA SEQ ? screen APC gene (index patient) FAP1 - - - - - (Germany) - - - ? - 1 Elke Holinski-Feder
?/? 18 15T c.7504G>A r.(?) p.(Gly2502Ser) missense substitution Unknown - VUS g.112178795G>A g.112843098G>A - - APC_000507 - PubMed: Sharp et al. 2004 - - De novo ? - - - - DNA SEQ leukocytes screen APC gene (index patient) FAP1 - USA, Seattle, Department of Genome Sciences K360, University of Washington - - - (United Kingdom (Great Britain)) - - - no (pedigree) - 1 Stefan Aretz
?/? 18 15T c.7504G>A r.(?) p.(Gly2502Ser) missense substitution Unknown - VUS g.112178795G>A g.112843098G>A - - APC_000507 - - - rs2229995 Unknown ? - - - - DNA SEQ leukocytes test known APC variant (relative) polyposis - - - M - Italy - - - yes (pedigree) - 1 Maurizio Genuardi
?/? 18 15T c.7504G>A r.(?) p.(Gly2502Ser) missense substitution Unknown - VUS g.112178795G>A g.112843098G>A - - APC_000507 - - - rs2229995 Germline ? - - - - DNA SEQ leukocytes screen APC gene (index patient) polyposis - - - F - Italy - - - yes (pedigree) - 1 Maurizio Genuardi
-/. 18 - c.7504G>A r.(?) p.(Gly2502Ser) - - Parent #1 - benign g.112178795G>A g.112843098G>A - - APC_000507 - Thibodeau lab (Mayo Clinic) - - Germline - - - - - DNA SEQ-NG-I blood - Healthy/Control - - gene panel study on controls - - United States - - - data for MLH1, MLH3, MSH2, MSH3, MSH6, MUTYH, PMS2 in the LOVD Insight database - 10 Melissa DeRycke
-/? 18 - c.7504G>A r.(?) p.(Gly2502Ser) - - Parent #1 - benign g.112178795G>A g.112843098G>A - - APC_000507 - Thibodeau lab (Mayo Clinic) - - Germline - - - - - DNA SEQ-NG-I blood - CRC - - gene panel study on colon cancer cases - - United States - - - data for MLH1, MLH3, MSH2, MSH3, MSH6, MUTYH, PMS2 in the LOVD Insight database - 44 Melissa DeRycke
?/? 18 - c.7504G>A r.(?) p.(Gly2502Ser) - - Unknown - VUS g.112178795G>A g.112843098G>A - - APC_000507 - - - - Germline - - - - - DNA SEQ - - polyposis - - - M - (Spain) - - - - - 1 Sira Moreno
-/. - - c.7504G>A r.(?) p.(Gly2502Ser) - - Unknown - benign g.112178795G>A g.112843098G>A APC(NM_000038.4):c.7504G>A (p.G2502S), APC(NM_000038.5):c.7504G>A (p.(Gly2502Ser)), APC(NM_000038.6):c.7504G>A (p.G2502S), APC(NM_001127510.3):c.75... - APC_000507 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-/. - - c.7504G>A r.(?) p.(Gly2502Ser) - - Unknown - benign g.112178795G>A g.112843098G>A APC(NM_000038.4):c.7504G>A (p.G2502S), APC(NM_000038.5):c.7504G>A (p.(Gly2502Ser)), APC(NM_000038.6):c.7504G>A (p.G2502S), APC(NM_001127510.3):c.75... - APC_000507 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-/. - - c.7504G>A r.(?) p.(Gly2502Ser) - - Unknown - benign g.112178795G>A g.112843098G>A APC(NM_000038.4):c.7504G>A (p.G2502S), APC(NM_000038.5):c.7504G>A (p.(Gly2502Ser)), APC(NM_000038.6):c.7504G>A (p.G2502S), APC(NM_001127510.3):c.75... - APC_000507 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-/. 17 - c.7504G>A r.(?) p.(Gly2502Ser) - - Parent #1 - benign g.112178795G>A g.112843098G>A - - APC_000507 - contributed by Dept. of Dr Vaccaro - - Germline - - - - - DNA SEQ - - ? - contributed by Dept. of Dr Vaccaro - - - Argentina - - - - - 1 CEMIC - Genotyping - Angela Solano
-/. - - c.7504G>A r.(?) p.(Gly2502Ser) - - Unknown - benign g.112178795G>A g.112843098G>A APC(NM_000038.4):c.7504G>A (p.G2502S), APC(NM_000038.5):c.7504G>A (p.(Gly2502Ser)), APC(NM_000038.6):c.7504G>A (p.G2502S), APC(NM_001127510.3):c.75... - APC_000507 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-?/. - - c.7504G>A r.(?) p.(Gly2502Ser) - - Parent #1 - likely benign g.112178795G>A g.112843098G>A - - APC_000507 127 heterozygous; Clinindb (India) PubMed: Narang 2020, Journal: Narang 2020 - rs2229995 Germline - 127/2795 individuals - - - DNA arraySNP - Infinium Global Screening Array v1.0 ? - PubMed: Narang 2020, Journal: Narang 2020 analysis 2794 individuals (India) - - India - - - - - 127 Mohammed Faruq
-?/. - - c.7504G>A r.(?) p.(Gly2502Ser) - - Both (homozygous) - likely benign g.112178795G>A g.112843098G>A - - APC_000507 4 homozygous; Clinindb (India) PubMed: Narang 2020, Journal: Narang 2020 - rs2229995 Germline - 4/2795 individuals - - - DNA arraySNP - Infinium Global Screening Array v1.0 ? - PubMed: Narang 2020, Journal: Narang 2020 analysis 2794 individuals (India) - - India - - - - - 4 Mohammed Faruq
-?/. - - c.7504G>A r.(?) p.(Gly2502Ser) - - Unknown - likely benign g.112178795G>A - APC(NM_000038.4):c.7504G>A (p.G2502S), APC(NM_000038.5):c.7504G>A (p.(Gly2502Ser)), APC(NM_000038.6):c.7504G>A (p.G2502S), APC(NM_001127510.3):c.75... - APC_000507 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
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