Usher syndrome 2A (autosomal recessive, mild) (USH2A) - coding DNA reference sequence

(used for variant description)

(last modified September 4, 2016)


This file was created to facilitate the description of sequence variants on transcript NM_206933.2 in the USH2A gene based on a coding DNA reference sequence following the HGVS recommendations.

The sequence was taken from NG_009497.1, covering USH2A transcript NM_206933.2.


Please note that introns are available by clicking on the exon numbers above the sequence.
 (upstream sequence)
                                         .         .                g.5027
                                  tgtttgctctgcagaatactttacctg       c.-361

 .         .         .         .         .         .                g.5087
 ggcacccaagtcttccttccagcattcctgctgctacagcctatttgctgagtaaccagg       c.-301

 .         .         .         .         .         .                g.5147
 ggttacagcagcgttgccaggcaacgagggacagcggtcctgttgaagagccatttgtca       c.-241

 .         .         .         .      | 02  .         .             g.5880
 cactgaggggactggttgaaatgcaataaagaaatg | ataccagcagctactcatgtcttc    c.-181

 .         .         .         .         .         .                g.5940
 gccattgctaagaacgtcgttggtattaccttactctgagaacgtgtctgcagtttccag       c.-121

 .         .         .         .         .         .                g.6000
 aaaatggagtatcgcaacatcacttaaagtaccctgcttcaaagtattgctggcaagtgg       c.-61

 .         .         .         .         .         .                g.6060
 cgtgggcctgattatttatttagaaatgctttatcaggaggagaatgcttttttgtaaac       c.-1

          .         .         .         .         .         .       g.6120
 ATGAATTGCCCAGTTCTTTCATTGGGCTCTGGCTTCTTGTTTCAGGTCATTGAAATGTTG       c.60
 M  N  C  P  V  L  S  L  G  S  G  F  L  F  Q  V  I  E  M  L         p.20

          .         .         .         .         .         .       g.6180
 ATCTTTGCCTATTTTGCTTCAATATCCTTGACTGAGTCACGAGGTCTTTTCCCAAGGCTG       c.120
 I  F  A  Y  F  A  S  I  S  L  T  E  S  R  G  L  F  P  R  L         p.40

          .         .         .         .         .         .       g.6240
 GAGAACGTGGGAGCTTTCAAGAAAGTTTCCATCGTGCCAACCCAAGCAGTATGTGGACTC       c.180
 E  N  V  G  A  F  K  K  V  S  I  V  P  T  Q  A  V  C  G  L         p.60

          .         .         .         .         .         .       g.6300
 CCAGACCGAAGCACTTTTTGTCACAGCTCTGCTGCTGCTGAAAGTATTCAGTTCTGTACC       c.240
 P  D  R  S  T  F  C  H  S  S  A  A  A  E  S  I  Q  F  C  T         p.80

          .         .         .         .         .         .       g.6360
 CAGCGGTTTTGTATTCAGGATTGCCCATACAGATCTTCACACCCTACCTACACTGCCCTT       c.300
 Q  R  F  C  I  Q  D  C  P  Y  R  S  S  H  P  T  Y  T  A  L         p.100

          .         .         .         .         .         .       g.6420
 TTCTCAGCAGGCCTCAGTAGCTGCATCACACCAGACAAGAATGATCTGCATCCTAACGCC       c.360
 F  S  A  G  L  S  S  C  I  T  P  D  K  N  D  L  H  P  N  A         p.120

          .         .         .         .         .         .       g.6480
 CATAGCAATTCTGCAAGTTTTATTTTTGGAAATCACAAGAGCTGCTTTTCTTCTCCTCCT       c.420
 H  S  N  S  A  S  F  I  F  G  N  H  K  S  C  F  S  S  P  P         p.140

          .         .         .         .         .         .       g.6540
 TCTCCAAAGCTGATGGCATCATTTACCTTAGCTGTATGGCTGAAACCTGAGCAACAAGGT       c.480
 S  P  K  L  M  A  S  F  T  L  A  V  W  L  K  P  E  Q  Q  G         p.160

       | 03  .         .         .         .         .         .    g.9772
 GTAAT | GTGTGTTATAGAAAAGACAGTAGATGGGCAGATTGTGTTCAAACTTACAATATCT    c.540
 V  M  |  C  V  I  E  K  T  V  D  G  Q  I  V  F  K  L  T  I  S      p.180

          .         .         .         .         .         .       g.9832
 GAGAAAGAGACCATGTTTTATTATCGCACAGTAAATGGTTTGCAACCTCCAATAAAAGTA       c.600
 E  K  E  T  M  F  Y  Y  R  T  V  N  G  L  Q  P  P  I  K  V         p.200

          .         .         .         .         .  | 04      .    g.63320
 ATGACACTGGGGAGAATTCTTGTGAAGAAATGGATTCATCTTAGTGTGCAG | GTGCATCAG    c.660
 M  T  L  G  R  I  L  V  K  K  W  I  H  L  S  V  Q   | V  H  Q      p.220

          .         .         .         .         .         .       g.63380
 ACAAAAATCAGCTTCTTTATCAATGGCGTGGAGAAGGATCATACACCTTTCAATGCAAGA       c.720
 T  K  I  S  F  F  I  N  G  V  E  K  D  H  T  P  F  N  A  R         p.240

          .         .         .         .         .         .       g.63440
 ACTCTAAGTGGTTCAATTACAGATTTTGCATCTGGTACTGTGCAAATAGGACAGAGTTTA       c.780
 T  L  S  G  S  I  T  D  F  A  S  G  T  V  Q  I  G  Q  S  L         p.260

      | 05   .         .         .         .         .         .    g.100798
 AATG | GTTTAGAGCAGTTTGTCGGAAGAATGCAAGATTTTCGATTATACCAAGTGGCACTT    c.840
 N  G |   L  E  Q  F  V  G  R  M  Q  D  F  R  L  Y  Q  V  A  L      p.280

          | 06         .         .         .         .         .    g.102849
 ACAAACAG | AGAGATTCTGGAAGTCTTCTCTGGAGATCTTCTCAGATTGCATGCCCAATCA    c.900
 T  N  R  |  E  I  L  E  V  F  S  G  D  L  L  R  L  H  A  Q  S      p.300

          .         .         .         .         .         .       g.102909
 CATTGCCGTTGCCCTGGCAGCCACCCGCGGGTCCACCCTTTGGCACAGCGGTACTGCATT       c.960
 H  C  R  C  P  G  S  H  P  R  V  H  P  L  A  Q  R  Y  C  I         p.320

          .         .         .         .         .         .       g.102969
 CCTAATGATGCAGGAGACACAGCTGATAATAGAGTGTCACGGTTGAATCCTGAAGCCCAT       c.1020
 P  N  D  A  G  D  T  A  D  N  R  V  S  R  L  N  P  E  A  H         p.340

          .         .         .         .         .         .       g.103029
 CCTCTCTCTTTTGTCAATGATAATGATGTTGGTACTTCATGGGTTTCAAATGTGTTTACA       c.1080
 P  L  S  F  V  N  D  N  D  V  G  T  S  W  V  S  N  V  F  T         p.360

          .         .         .         .         .         .       g.103089
 AACATTACACAGCTTAATCAAGGAGTGACTATTTCAGTTGATTTGGAAAATGGACAGTAT       c.1140
 N  I  T  Q  L  N  Q  G  V  T  I  S  V  D  L  E  N  G  Q  Y         p.380

     | 07    .         .         .         .         .         .    g.104101
 CAG | GTGTTTTATATTATCATTCAGTTCTTTAGTCCACAACCAACGGAAATAAGGATTCAA    c.1200
 Q   | V  F  Y  I  I  I  Q  F  F  S  P  Q  P  T  E  I  R  I  Q      p.400

          .         .         .         .         .         .       g.104161
 AGGAAGAAGGAAAATAGTTTAGATTGGGAGGACTGGCAATATTTTGCCAGGAATTGTGGT       c.1260
 R  K  K  E  N  S  L  D  W  E  D  W  Q  Y  F  A  R  N  C  G         p.420

          .         .         .         .         .         .       g.104221
 GCTTTTGGAATGAAAAACAATGGAGATTTGGAAAAACCTGATTCTGTCAACTGTCTTCAG       c.1320
 A  F  G  M  K  N  N  G  D  L  E  K  P  D  S  V  N  C  L  Q         p.440

          | 08         .         .         .         .         .    g.104753
 CTTTCCAA | TTTTACTCCATATTCCCGTGGCAATGTCACATTTAGCATCCTGACACCTGGA    c.1380
 L  S  N  |  F  T  P  Y  S  R  G  N  V  T  F  S  I  L  T  P  G      p.460

          .         .         .         .         .         .       g.104813
 CCAAATTATCGTCCTGGATACAATAACTTCTATAATACCCCATCTCTTCAAGAGTTCGTA       c.1440
 P  N  Y  R  P  G  Y  N  N  F  Y  N  T  P  S  L  Q  E  F  V         p.480

          .         .         .         .         .         .       g.104873
 AAAGCCACGCAAATAAGGTTTCATTTTCATGGGCAGTACTATACAACTGAGACTGCTGTT       c.1500
 K  A  T  Q  I  R  F  H  F  H  G  Q  Y  Y  T  T  E  T  A  V         p.500

          .         .         .         .         . | 09       .    g.106430
 AACCTCAGACACAGATATTATGCAGTGGACGAAATCACCATTAGTGGGAG | ATGTCAGTGC    c.1560
 N  L  R  H  R  Y  Y  A  V  D  E  I  T  I  S  G  R  |  C  Q  C      p.520

          .         .         .         .         .         .       g.106490
 CATGGTCATGCCGATAACTGCGACACAACAAGCCAGCCATATAGATGCCTCTGCTCCCAG       c.1620
 H  G  H  A  D  N  C  D  T  T  S  Q  P  Y  R  C  L  C  S  Q         p.540

          .         .     | 10   .         .         .         .    g.136062
 GAGAGCTTCACTGAAGGACTTCAT | TGTGATCGCTGCTTGCCTCTTTATAATGACAAGCCT    c.1680
 E  S  F  T  E  G  L  H   | C  D  R  C  L  P  L  Y  N  D  K  P      p.560

          .         .         .         .         .         .       g.136122
 TTCCGCCAAGGTGATCAAGTTTACGCTTTCAATTGTAAACCTTGTCAATGCAACAGCCAT       c.1740
 F  R  Q  G  D  Q  V  Y  A  F  N  C  K  P  C  Q  C  N  S  H         p.580

          .         .         .         .         .         .       g.136182
 TCCAAAAGCTGCCATTACAACATCTCTGTAGACCCATTTCCTTTTGAGCACTTCAGAGGG       c.1800
 S  K  S  C  H  Y  N  I  S  V  D  P  F  P  F  E  H  F  R  G         p.600

          .         .         .         . | 11       .         .    g.139006
 GGAGGAGGAGTTTGTGATGATTGTGAGCATAACACTACAG | GAAGGAACTGTGAGCTGTGC    c.1860
 G  G  G  V  C  D  D  C  E  H  N  T  T  G |   R  N  C  E  L  C      p.620

          .         .         .         .         .         .       g.139066
 AAGGATTACTTTTTCCGACAAGTTGGTGCAGATCCTTCGGCCATAGATGTTTGCAAACCC       c.1920
 K  D  Y  F  F  R  Q  V  G  A  D  P  S  A  I  D  V  C  K  P         p.640

          .         .         .         .         .  | 12      .    g.177307
 TGTGACTGTGATACAGTTGGCACTAGAAATGGTAGCATTCTTTGTGATCAG | ATTGGAGGA    c.1980
 C  D  C  D  T  V  G  T  R  N  G  S  I  L  C  D  Q   | I  G  G      p.660

          .         .         .         .         .         .       g.177367
 CAGTGTAATTGTAAGAGACACGTGTCTGGCAGGCAGTGCAATCAGTGCCAGAATGGATTC       c.2040
 Q  C  N  C  K  R  H  V  S  G  R  Q  C  N  Q  C  Q  N  G  F         p.680

          .         .         .         .         .         .       g.177427
 TACAATCTACAAGAGTTGGATCCTGATGGCTGCAGTCCCTGTAACTGCAATACCTCTGGG       c.2100
 Y  N  L  Q  E  L  D  P  D  G  C  S  P  C  N  C  N  T  S  G         p.700

          .         .         .         .         .         .       g.177487
 ACAGTGGATGGAGATATTACCTGTCACCAAAATTCAGGCCAGTGCAAGTGCAAAGCAAAC       c.2160
 T  V  D  G  D  I  T  C  H  Q  N  S  G  Q  C  K  C  K  A  N         p.720

         | 13.         .         .         .         .         .    g.181223
 GTTATTG | GGCTTAGGTGTGATCATTGCAATTTTGGATTTAAATTTCTCCGAAGCTTTAAT    c.2220
 V  I  G |   L  R  C  D  H  C  N  F  G  F  K  F  L  R  S  F  N      p.740

          .         .         .         .         .         .       g.181283
 GATGTTGGATGTGAGCCCTGCCAGTGTAACCTCCATGGCTCAGTGAACAAATTCTGCAAT       c.2280
 D  V  G  C  E  P  C  Q  C  N  L  H  G  S  V  N  K  F  C  N         p.760

          .         .         .         .         .         .       g.181343
 CCTCACTCTGGGCAGTGTGAGTGCAAAAAAGAAGCCAAAGGACTTCAGTGTGACACCTGC       c.2340
 P  H  S  G  Q  C  E  C  K  K  E  A  K  G  L  Q  C  D  T  C         p.780

          .         .         .         .         .         .       g.181403
 AGAGAAAACTTTTATGGGTTAGATGTCACCAATTGTAAGGCCTGTGACTGTGACACAGCT       c.2400
 R  E  N  F  Y  G  L  D  V  T  N  C  K  A  C  D  C  D  T  A         p.800

          .         .         .         .         .         .       g.181463
 GGATCCCTCCCTGGGACTGTCTGTAATGCTAAGACAGGGCAGTGCATCTGCAAGCCCAAT       c.2460
 G  S  L  P  G  T  V  C  N  A  K  T  G  Q  C  I  C  K  P  N         p.820

          .         .         .         .         .         .       g.181523
 GTTGAAGGGAGACAGTGCAATAAATGTTTGGAGGGAAACTTCTACCTACGGCAAAATAAT       c.2520
 V  E  G  R  Q  C  N  K  C  L  E  G  N  F  Y  L  R  Q  N  N         p.840

          .         .         .         .         .         .       g.181583
 TCTTTCCTCTGTCTGCCTTGCAACTGTGATAAGACTGGGACAATAAATGGCTCTCTGCTG       c.2580
 S  F  L  C  L  P  C  N  C  D  K  T  G  T  I  N  G  S  L  L         p.860

          .         .         .         .         .         .       g.181643
 TGTAACAAATCAACAGGACAATGTCCTTGCAAATTAGGGGTAACAGGTCTTCGCTGTAAT       c.2640
 C  N  K  S  T  G  Q  C  P  C  K  L  G  V  T  G  L  R  C  N         p.880

          .         .         .         .         .         .       g.181703
 CAGTGTGAGCCTCACAGGTACAATTTGACCATTGACAATTTTCAACACTGCCAGATGTGT       c.2700
 Q  C  E  P  H  R  Y  N  L  T  I  D  N  F  Q  H  C  Q  M  C         p.900

          .         .         .         .         .         .       g.181763
 GAGTGTGATTCCTTGGGGACATTACCTGGGACCATTTGTGACCCAATCAGTGGCCAGTGC       c.2760
 E  C  D  S  L  G  T  L  P  G  T  I  C  D  P  I  S  G  Q  C         p.920

          .         .         .         .          | 14        .    g.196271
 CTGTGTGTGCCTAATCGTCAAGGAAGAAGGTGTAATCAGTGTCAACCAG | GTTTTTATATT    c.2820
 L  C  V  P  N  R  Q  G  R  R  C  N  Q  C  Q  P  G |   F  Y  I      p.940

          .         .         .         .         .         .       g.196331
 TCTCCAGGCAATGCCACTGGCTGCCTGCCATGCTCATGCCATACAACTGGTGCAGTTAAT       c.2880
 S  P  G  N  A  T  G  C  L  P  C  S  C  H  T  T  G  A  V  N         p.960

          .         .         .         .         .         .       g.196391
 CACATCTGTAATAGCCTGACTGGTCAGTGTGTTTGCCAAGATGCTTCCATTGCTGGGCAA       c.2940
 H  I  C  N  S  L  T  G  Q  C  V  C  Q  D  A  S  I  A  G  Q         p.980

          .         .         .         .         .    | 15    .    g.210853
 CGTTGTGACCAATGCAAAGACCATTACTTTGGATTTGATCCTCAGACTGGAAG | ATGTCAG    c.3000
 R  C  D  Q  C  K  D  H  Y  F  G  F  D  P  Q  T  G  R  |  C  Q      p.1000

          .         .         .         .         .         .       g.210913
 CCTTGTAATTGTCATCTCTCAGGAGCCTTGAATGAAACCTGTCACTTGGTCACAGGCCAG       c.3060
 P  C  N  C  H  L  S  G  A  L  N  E  T  C  H  L  V  T  G  Q         p.1020

          .         .         .         .         .         .       g.210973
 TGTTTCTGTAAACAATTTGTCACTGGCTCAAAGTGTGATGCTTGTGTTCCCAGTGCAAGC       c.3120
 C  F  C  K  Q  F  V  T  G  S  K  C  D  A  C  V  P  S  A  S         p.1040

          .         .         .        | 16.         .         .    g.220988
 CACTTGGATGTCAACAATCTATTGGGTTGCAGCAAAA | CTCCATTCCAGCAACCTCCGCCC    c.3180
 H  L  D  V  N  N  L  L  G  C  S  K  T |   P  F  Q  Q  P  P  P      p.1060

          .         .         .         .         .         .       g.221048
 AGAGGACAAGTTCAAAGTTCTTCTGCTATCAATCTCTCCTGGAGTCCACCTGATTCTCCA       c.3240
 R  G  Q  V  Q  S  S  S  A  I  N  L  S  W  S  P  P  D  S  P         p.1080

          .         .         .         .         .         .       g.221108
 AATGCCCACTGGCTTACTTACAGTTTACTCAGGGATGGTTTTGAAATCTACACAACAGAG       c.3300
 N  A  H  W  L  T  Y  S  L  L  R  D  G  F  E  I  Y  T  T  E         p.1100

          .       | 17 .         .         .         .         .    g.228319
 GATCAATACCCATACA | GTATTCAATACTTCTTAGACACAGACCTGTTACCATATACCAAA    c.3360
 D  Q  Y  P  Y  S |   I  Q  Y  F  L  D  T  D  L  L  P  Y  T  K      p.1120

          .         .         .         .         .         .       g.228379
 TATTCCTATTACATTGAGACCACCAATGTGCATGGTTCAACAAGGAGTGTAGCTGTCACT       c.3420
 Y  S  Y  Y  I  E  T  T  N  V  H  G  S  T  R  S  V  A  V  T         p.1140

          .         .         .         .         .         .       g.228439
 TACAAGACAAAACCAGGGGTCCCAGAGGGAAACTTGACTTTAAGTTATATCATTCCTATT       c.3480
 Y  K  T  K  P  G  V  P  E  G  N  L  T  L  S  Y  I  I  P  I         p.1160

          .         .         .         .         .         .       g.228499
 GGCTCAGACTCTGTGACACTTACCTGGACAACACTCTCAAATCAATCTGGTCCCATAGAG       c.3540
 G  S  D  S  V  T  L  T  W  T  T  L  S  N  Q  S  G  P  I  E         p.1180

          .         .         .         .         .         .       g.228559
 AAATATATTTTGTCCTGTGCCCCTTTGGCTGGTGGTCAGCCATGTGTTTCCTACGAAGGT       c.3600
 K  Y  I  L  S  C  A  P  L  A  G  G  Q  P  C  V  S  Y  E  G         p.1200

          .         .         .         .         .         .       g.228619
 CATGAAACCTCAGCTACCATCTGGAATCTGGTTCCATTTGCCAAGTACGATTTTTCTGTA       c.3660
 H  E  T  S  A  T  I  W  N  L  V  P  F  A  K  Y  D  F  S  V         p.1220

          .         .         .         .         .         .       g.228679
 CAGGCGTGTACTAGCGGGGGCTGTTTACACAGCTTGCCCATTACAGTGACCACAGCCCAG       c.3720
 Q  A  C  T  S  G  G  C  L  H  S  L  P  I  T  V  T  T  A  Q         p.1240

          .         .         .         .         .         .       g.228739
 GCCCCTCCCCAAAGACTAAGTCCACCTAAGATGCAGAAAATCAGTTCTACAGAACTTCAT       c.3780
 A  P  P  Q  R  L  S  P  P  K  M  Q  K  I  S  S  T  E  L  H         p.1260

          .         .         .  | 18      .         .         .    g.229841
 GTAGAATGGTCTCCACCAGCGGAACTAAATG | GAATAATTATAAGATATGAACTATACATG    c.3840
 V  E  W  S  P  P  A  E  L  N  G |   I  I  I  R  Y  E  L  Y  M      p.1280

          .         .         .         .         .         .       g.229901
 AGAAGACTGAGATCTACTAAAGAAACCACATCTGAGGAAAGTCGAGTTTTTCAGAGCAGT       c.3900
 R  R  L  R  S  T  K  E  T  T  S  E  E  S  R  V  F  Q  S  S         p.1300

          .         .         .         .         .         .       g.229961
 GGTTGGCTCAGTCCTCATTCATTTGTAGAATCGGCCAATGAAAATGCATTAAAACCTCCT       c.3960
 G  W  L  S  P  H  S  F  V  E  S  A  N  E  N  A  L  K  P  P         p.1320

          .         .         .         .         .         .       g.230021
 CAAACAATGACAACCATCACTGGCTTGGAGCCATACACCAAGTATGAGTTCAGAGTCTTA       c.4020
 Q  T  M  T  T  I  T  G  L  E  P  Y  T  K  Y  E  F  R  V  L         p.1340

          .         .         .         .         .         .       g.230081
 GCTGTGAATATGGCTGGAAGTGTGTCTTCTGCCTGGGTCTCAGAAAGAACGGGAGAATCA       c.4080
 A  V  N  M  A  G  S  V  S  S  A  W  V  S  E  R  T  G  E  S         p.1360

   | 19      .         .         .         .         .         .    g.231733
 G | CACCTGTATTCATGATCCCTCCTTCAGTCTTTCCCCTCTCTTCGTACTCTCTCAATATC    c.4140
 A |   P  V  F  M  I  P  P  S  V  F  P  L  S  S  Y  S  L  N  I      p.1380

          .         .         .         .         .         .       g.231793
 TCCTGGGAGAAGCCAGCAGATAATGTTACAAGAGGAAAAGTTGTGGGGTATGACATCAAT       c.4200
 S  W  E  K  P  A  D  N  V  T  R  G  K  V  V  G  Y  D  I  N         p.1400

          .         .         .         .         .  | 20      .    g.238038
 ATGCTTTCTGAACAATCACCTCAACAGTCTATTCCCATGGCGTTTTCACAG | CTGTTGCAC    c.4260
 M  L  S  E  Q  S  P  Q  Q  S  I  P  M  A  F  S  Q   | L  L  H      p.1420

          .         .         .         .         .         .       g.238098
 ACTGCTAAATCCCAAGAACTATCTTACACTGTAGAAGGACTGAAACCTTATAGGATATAT       c.4320
 T  A  K  S  Q  E  L  S  Y  T  V  E  G  L  K  P  Y  R  I  Y         p.1440

          .         .         .         .         .         .       g.238158
 GAGTTTACTATTACTCTCTGCAATTCAGTTGGTTGTGTGACCAGTGCTTCGGGAGCAGGA       c.4380
 E  F  T  I  T  L  C  N  S  V  G  C  V  T  S  A  S  G  A  G         p.1460

          .       | 21 .         .         .         .         .    g.252958
 CAAACTTTAGCAGCAG | CACCAGCACAACTGAGGCCACCTCTGGTTAAAGGAATCAACAGC    c.4440
 Q  T  L  A  A  A |   P  A  Q  L  R  P  P  L  V  K  G  I  N  S      p.1480

          .         .         .         .         .         .       g.253018
 ACAACAATCCATCTTAAGTGGTTTCCACCTGAAGAACTGAATGGACCCTCTCCTATATAT       c.4500
 T  T  I  H  L  K  W  F  P  P  E  E  L  N  G  P  S  P  I  Y         p.1500

          .         .         .         .         .         .       g.253078
 CAGCTGGAAAGGAGAGAGTCATCTCTACCAGCTCTGATGACCACGATGATGAAAGGAATC       c.4560
 Q  L  E  R  R  E  S  S  L  P  A  L  M  T  T  M  M  K  G  I         p.1520

          .         .         .         .         .         .       g.253138
 CGTTTCATAGGAAATGGGTATTGTAAATTTCCCAGCTCCACTCACCCAGTCAATACAGAC       c.4620
 R  F  I  G  N  G  Y  C  K  F  P  S  S  T  H  P  V  N  T  D         p.1540

         | 22.         .         .         .         .         .    g.331236
 TTCACTG | GCATTAAGGCCAGCTTTCGAACAAAAGTGCCTGAAGGTTTGATTGTCTTTGCA    c.4680
 F  T  G |   I  K  A  S  F  R  T  K  V  P  E  G  L  I  V  F  A      p.1560

          .         .         .         .         .         .       g.331296
 GCATCACCTGGCAATCAGGAAGAGTATTTTGCACTTCAGTTGAAGAAGGGACGTCTTTAT       c.4740
 A  S  P  G  N  Q  E  E  Y  F  A  L  Q  L  K  K  G  R  L  Y         p.1580

          .         | 23         .         .         .         .    g.339299
 TTTCTTTTTGATCCTCAG | GGGTCACCAGTGGAAGTAACTACAACTAATGATCATGGCAAA    c.4800
 F  L  F  D  P  Q   | G  S  P  V  E  V  T  T  T  N  D  H  G  K      p.1600

          .         .         .         .         .         .       g.339359
 CAATATAGTGATGGAAAATGGCATGAAATAATTGCTATTAGGCATCAGGCTTTTGGCCAA       c.4860
 Q  Y  S  D  G  K  W  H  E  I  I  A  I  R  H  Q  A  F  G  Q         p.1620

          .         .      | 24  .         .         .         .    g.341611
 ATCACTCTGGATGGGATATATACAG | GTTCCTCTGCCATCCTGAATGGTAGTACTGTTATT    c.4920
 I  T  L  D  G  I  Y  T  G |   S  S  A  I  L  N  G  S  T  V  I      p.1640

          .         .         .         .         .         .       g.341671
 GGAGATAACACAGGAGTCTTTCTGGGAGGGCTCCCGCGAAGTTATACCATCCTCAGGAAG       c.4980
 G  D  N  T  G  V  F  L  G  G  L  P  R  S  Y  T  I  L  R  K         p.1660

         | 25.         .         .         .         .         .    g.343572
 GATCCTG | AGATAATCCAAAAAGGTTTTGTGGGCTGTCTCAAGGATGTACATTTTATGAAG    c.5040
 D  P  E |   I  I  Q  K  G  F  V  G  C  L  K  D  V  H  F  M  K      p.1680

          .         .         .         .         .         .       g.343632
 AATTACAATCCGTCAGCTATTTGGGAACCTCTGGATTGGCAGAGTTCTGAAGAACAAATC       c.5100
 N  Y  N  P  S  A  I  W  E  P  L  D  W  Q  S  S  E  E  Q  I         p.1700

          .         .         .         .         .         .       g.343692
 AACGTGTATAACAGCTGGGAGGGATGTCCCGCTTCATTAAATGAGGGAGCTCAGTTCCTA       c.5160
 N  V  Y  N  S  W  E  G  C  P  A  S  L  N  E  G  A  Q  F  L         p.1720

         | 26.         .         .         .         .         .    g.344863
 GGAGCAG | GGTTCCTGGAACTTCATCCATATATGTTTCATGGTGGAATGAACTTTGAGATT    c.5220
 G  A  G |   F  L  E  L  H  P  Y  M  F  H  G  G  M  N  F  E  I      p.1740

          .         .         .         .         .         .       g.344923
 TCCTTTAAGTTCAGAACTGACCAATTAAATGGATTGCTTCTTTTCGTTTATAACAAAGAT       c.5280
 S  F  K  F  R  T  D  Q  L  N  G  L  L  L  F  V  Y  N  K  D         p.1760

          .         | 27         .         .         .         .    g.350076
 GGACCTGATTTTCTTGCT | ATGGAGCTGAAAAGTGGAATATTGACCTTCCGGTTAAATACC    c.5340
 G  P  D  F  L  A   | M  E  L  K  S  G  I  L  T  F  R  L  N  T      p.1780

          .         .         .         .         .         .       g.350136
 AGTCTTGCCTTTACACAAGTGGATCTATTGCTGGGGCTATCCTATTGTAATGGAAAGTGG       c.5400
 S  L  A  F  T  Q  V  D  L  L  L  G  L  S  Y  C  N  G  K  W         p.1800

          .         .         .         .         .         .       g.350196
 AATAAAGTCATTATTAAAAAGGAAGGCTCTTTCATATCAGCAAGTGTGAATGGACTGATG       c.5460
 N  K  V  I  I  K  K  E  G  S  F  I  S  A  S  V  N  G  L  M         p.1820

          .         .         .         .         .         .       g.350256
 AAGCATGCATCGGAGTCCGGAGACCAGCCACTGGTGGTGAATTCACCAGTTTATGTGGGA       c.5520
 K  H  A  S  E  S  G  D  Q  P  L  V  V  N  S  P  V  Y  V  G         p.1840

          .         .         .         .         .   | 28     .    g.355104
 GGAATCCCACAGGAACTGCTGAACTCTTATCAACATTTGTGTTTGGAACAAG | GTTTCGGT    c.5580
 G  I  P  Q  E  L  L  N  S  Y  Q  H  L  C  L  E  Q  G |   F  G      p.1860

          .         .         .         .         .         .       g.355164
 GGTTGCATGAAGGATGTTAAATTTACACGGGGTGCTGTCGTTAACTTGGCATCTGTGTCC       c.5640
 G  C  M  K  D  V  K  F  T  R  G  A  V  V  N  L  A  S  V  S         p.1880

          .         .         .         .         .         .       g.355224
 AGCGGTGCTGTCAGAGTCAATCTGGATGGATGCCTATCAACTGACAGTGCTGTTAACTGC       c.5700
 S  G  A  V  R  V  N  L  D  G  C  L  S  T  D  S  A  V  N  C         p.1900

          .         .         .         .         .         .       g.355284
 AGGGGAAATGACTCCATCCTGGTTTACCAGGGAAAAGAGCAGAGTGTTTACGAGGGTGGT       c.5760
 R  G  N  D  S  I  L  V  Y  Q  G  K  E  Q  S  V  Y  E  G  G         p.1920

          .       | 29 .         .         .         .         .    g.355471
 CTCCAGCCTTTTACAG | AATACCTGTATCGAGTGATAGCCTCGCATGAAGGAGGTTCAGTA    c.5820
 L  Q  P  F  T  E |   Y  L  Y  R  V  I  A  S  H  E  G  G  S  V      p.1940

          .         .         .        | 30.         .         .    g.358127
 TATAGTGATTGGAGTCGAGGACGTACAACAGGAGCAG | CTCCACAAAGTGTGCCAACTCCC    c.5880
 Y  S  D  W  S  R  G  R  T  T  G  A  A |   P  Q  S  V  P  T  P      p.1960

          .         .         .         .         .         .       g.358187
 TCAAGAGTCCGCAGCTTAAATGGATACAGCATTGAGGTGACCTGGGATGAACCTGTTGTC       c.5940
 S  R  V  R  S  L  N  G  Y  S  I  E  V  T  W  D  E  P  V  V         p.1980

          .         .         .         .         .         .       g.358247
 AGAGGTGTAATTGAGAAGTACATTCTGAAAGCCTATAGTGAGGACAGCACCCGTCCACCC       c.6000
 R  G  V  I  E  K  Y  I  L  K  A  Y  S  E  D  S  T  R  P  P         p.2000

          .         .         .         .          | 31        .    g.379760
 CGCATGCCCTCTGCCAGTGCTGAATTTGTCAATACAAGCAACCTCACAG | GCATATTGACA    c.6060
 R  M  P  S  A  S  A  E  F  V  N  T  S  N  L  T  G |   I  L  T      p.2020

          .         .         .         .         .         .       g.379820
 GGCTTGCTACCCTTCAAAAACTATGCAGTAACCCTAACTGCTTGCACTTTGGCTGGCTGT       c.6120
 G  L  L  P  F  K  N  Y  A  V  T  L  T  A  C  T  L  A  G  C         p.2040

          .         .         .         .    | 32    .         .    g.381821
 ACTGAGAGCTCACATGCATTGAACATCTCTACTCCACAAGAAG | CCCCACAAGAGGTTCAG    c.6180
 T  E  S  S  H  A  L  N  I  S  T  P  Q  E  A |   P  Q  E  V  Q      p.2060

          .         .         .         .         .         .       g.381881
 CCACCAGTAGCCAAATCCCTTCCCAGTTCTTTGCTGCTCTCCTGGAACCCACCCAAAAAG       c.6240
 P  P  V  A  K  S  L  P  S  S  L  L  L  S  W  N  P  P  K  K         p.2080

          .         .         .         .         .         .       g.381941
 GCAAATGGTATTATAACTCAGTACTGTTTATACATGGATGGGAGGCTGATCTATTCAGGC       c.6300
 A  N  G  I  I  T  Q  Y  C  L  Y  M  D  G  R  L  I  Y  S  G         p.2100

          .         .      | 33  .         .         .         .    g.427869
 AGTGAGGAGAACTACACAGTCACAG | ATTTAGCAGTATTTACACCCCACCAGTTTCTACTA    c.6360
 S  E  E  N  Y  T  V  T  D |   L  A  V  F  T  P  H  Q  F  L  L      p.2120

          .         .         .         .         .         .       g.427929
 AGTGCATGCACACATGTGGGCTGTACAAACAGTTCCTGGGTCCTACTGTACACAGCACAG       c.6420
 S  A  C  T  H  V  G  C  T  N  S  S  W  V  L  L  Y  T  A  Q         p.2140

          .         .         .         .         .         .       g.427989
 CTGCCACCAGAACACGTGGATTCCCCAGTTCTGACTGTCCTGGATTCTAGAACTATACAC       c.6480
 L  P  P  E  H  V  D  S  P  V  L  T  V  L  D  S  R  T  I  H         p.2160

       | 34  .         .         .         .         .         .    g.429393
 ATACA | GTGGAAACAACCAAGAAAAATAAGTGGGATTCTGGAACGCTATGTATTATATATG    c.6540
 I  Q  |  W  K  Q  P  R  K  I  S  G  I  L  E  R  Y  V  L  Y  M      p.2180

          .         .         .         .         .         .       g.429453
 TCAAACCATACACATGATTTTACAATTTGGAGTGTCATCTATAACAGTACAGAACTTTTC       c.6600
 S  N  H  T  H  D  F  T  I  W  S  V  I  Y  N  S  T  E  L  F         p.2200

          .         .         .         .         .        | 35.    g.435232
 CAGGATCATATGCTACAATACGTTTTACCTGGTAATAAATATCTCATCAAGCTGGGA | GCT    c.6660
 Q  D  H  M  L  Q  Y  V  L  P  G  N  K  Y  L  I  K  L  G   | A      p.2220

          .         .         .         .         .         .       g.435292
 TGCACAGGTGGTGGGTGCACAGTGAGTGAGGCCAGTGAGGCCCTAACTGACGAGGACATA       c.6720
 C  T  G  G  G  C  T  V  S  E  A  S  E  A  L  T  D  E  D  I         p.2240

          .         .         .         .         .         .       g.435352
 CCCGAAGGCGTGCCAGCCCCCAAAGCCCACTCATATTCACCTGACTCCTTTAATGTCTCC       c.6780
 P  E  G  V  P  A  P  K  A  H  S  Y  S  P  D  S  F  N  V  S         p.2260

          .         .      | 36  .         .         .         .    g.457655
 TGGACTGAGCCTGAATATCCGAATG | GTGTTATCACGAGTTATGGATTATATCTAGATGGT    c.6840
 W  T  E  P  E  Y  P  N  G |   V  I  T  S  Y  G  L  Y  L  D  G      p.2280

          .         .         .         .         .         .       g.457715
 ATATTAATCCACAATTCCTCAGAACTCAGCTATCGTGCTTACGGATTTGCTCCTTGGAGT       c.6900
 I  L  I  H  N  S  S  E  L  S  Y  R  A  Y  G  F  A  P  W  S         p.2300

          .         .         .         .         .        | 37.    g.462920
 TTACATTCCTTCAGAGTCCAAGCATGCACGGCCAAAGGTTGTGCTCTGGGCCCACTG | GTG    c.6960
 L  H  S  F  R  V  Q  A  C  T  A  K  G  C  A  L  G  P  L   | V      p.2320

          .         .         .         .         .         .       g.462980
 GAAAATCGAACTCTAGAAGCTCCTCCTGAAGGAACAGTAAATGTGTTTGTCAAAACACAG       c.7020
 E  N  R  T  L  E  A  P  P  E  G  T  V  N  V  F  V  K  T  Q         p.2340

          .         .         .         .         .         .       g.463040
 GGATCCCGGAAAGCCCACGTGAGGTGGGAAGCACCTTTTCGCCCTAATGGACTCTTAACA       c.7080
 G  S  R  K  A  H  V  R  W  E  A  P  F  R  P  N  G  L  L  T         p.2360

          .         .         .         . | 38       .         .    g.493621
 CACTCAGTCCTTTTCACTGGGATATTCTATGTAGACCCAG | TAGGTAATAACTACACCCTT    c.7140
 H  S  V  L  F  T  G  I  F  Y  V  D  P  V |   G  N  N  Y  T  L      p.2380

          .         .         .         .         .         .       g.493681
 CTGAATGTCACAAAAGTCATGTACAGCGGAGAAGAGACAAACCTTTGGGTGCTCATCGAT       c.7200
 L  N  V  T  K  V  M  Y  S  G  E  E  T  N  L  W  V  L  I  D         p.2400

          .         .         .         .         .         .       g.493741
 GGGCTGGTTCCTTTTACCAACTATACTGTACAAGTGAATATTTCAAATAGCCAAGGCAGC       c.7260
 G  L  V  P  F  T  N  Y  T  V  Q  V  N  I  S  N  S  Q  G  S         p.2420

          .         .         .         . | 39       .         .    g.527511
 TTGATAACTGATCCTATAACAATTGCAATGCCTCCAGGAG | CTCCAGATGGCGTGCTGCCT    c.7320
 L  I  T  D  P  I  T  I  A  M  P  P  G  A |   P  D  G  V  L  P      p.2440

          .         .         .         .         .         .       g.527571
 CCCAGGCTTTCATCTGCCACTCCAACCAGTCTTCAGGTTGTCTGGTCTACACCAGCTCGT       c.7380
 P  R  L  S  S  A  T  P  T  S  L  Q  V  V  W  S  T  P  A  R         p.2460

          .         .         .         .         .         .       g.527631
 AATAACGCTCCTGGCTCTCCCAGATACCAACTCCAGATGAGGTCTGGCGACTCCACCCAT       c.7440
 N  N  A  P  G  S  P  R  Y  Q  L  Q  M  R  S  G  D  S  T  H         p.2480

          .  | 40      .         .         .         .         .    g.528228
 GGATTTCTAGA | GTTATTTTCCAATCCTTCTGCATCGTTAAGCTATGAAGTGAGTGATCTC    c.7500
 G  F  L  E  |  L  F  S  N  P  S  A  S  L  S  Y  E  V  S  D  L      p.2500

          .         .         .         .         .         .       g.528288
 CAACCGTACACAGAGTATATGTTTCGGTTGGTTGCCTCCAATGGATTTGGCAGTGCACAT       c.7560
 Q  P  Y  T  E  Y  M  F  R  L  V  A  S  N  G  F  G  S  A  H         p.2520

          .         .         .     | 41   .         .         .    g.539368
 AGTTCTTGGATTCCATTCATGACCGCAGAGGACA | AACCTGGACCTGTAGTTCCTCCGATT    c.7620
 S  S  W  I  P  F  M  T  A  E  D  K |   P  G  P  V  V  P  P  I      p.2540

          .         .         .         .         .         .       g.539428
 CTTCTGGATGTGAAGTCAAGAATGATGTTGGTCACCTGGCAGCATCCTAGAAAATCCAAT       c.7680
 L  L  D  V  K  S  R  M  M  L  V  T  W  Q  H  P  R  K  S  N         p.2560

          .         .         .         .         .         .       g.539488
 GGGGTTATTACCCATTATAACATTTATCTACATGGCCGTCTATACTTGAGAACTCCTGGA       c.7740
 G  V  I  T  H  Y  N  I  Y  L  H  G  R  L  Y  L  R  T  P  G         p.2580

          .         .         .         .         .         .       g.539548
 AATGTCACTAATTGCACAGTGATGCATTTACACCCATACACTGCCTATAAGTTTCAGGTA       c.7800
 N  V  T  N  C  T  V  M  H  L  H  P  Y  T  A  Y  K  F  Q  V         p.2600

          .         .         .         .         .         .       g.539608
 GAAGCCTGCACTTCAAAAGGATGTTCCCTTTCACCAGAGTCCCAGACTGTATGGACACTC       c.7860
 E  A  C  T  S  K  G  C  S  L  S  P  E  S  Q  T  V  W  T  L         p.2620

          .         .         .         .         .         .       g.539668
 CCAGGGGCACCGGAAGGGATCCCAAGTCCAGAGCTGTTCTCTGATACTCCAACATCTGTG       c.7920
 P  G  A  P  E  G  I  P  S  P  E  L  F  S  D  T  P  T  S  V         p.2640

          .         .         .         .         .         .       g.539728
 ATTATATCTTGGCAACCCCCTACCCACCCCAATGGCTTGGTGGAGAATTTCACAATTGAG       c.7980
 I  I  S  W  Q  P  P  T  H  P  N  G  L  V  E  N  F  T  I  E         p.2660

          .         .         .         .         .         .       g.539788
 AGAAGAGTCAAAGGAAAGGAAGAAGTTACTACCCTGGTGACTCTCCCGAGGAGTCATTCC       c.8040
 R  R  V  K  G  K  E  E  V  T  T  L  V  T  L  P  R  S  H  S         p.2680

          .         .         .         .         .         .       g.539848
 ATGAGGTTTATTGACAAGACTTCTGCTCTTAGCCCATGGACAAAATATGAATATCGGGTA       c.8100
 M  R  F  I  D  K  T  S  A  L  S  P  W  T  K  Y  E  Y  R  V         p.2700

          .         .         .         .         .         .       g.539908
 CTGATGAGCACTCTTCATGGAGGCACAAACAGCAGTGCTTGGGTAGAAGTTACCACAAGA       c.8160
 L  M  S  T  L  H  G  G  T  N  S  S  A  W  V  E  V  T  T  R         p.2720

          .         .         .         .         .         .       g.539968
 CCCTCACGACCTGCTGGGGTGCAGCCACCTGTGGTGACAGTGCTGGAACCCGATGCAGTC       c.8220
 P  S  R  P  A  G  V  Q  P  P  V  V  T  V  L  E  P  D  A  V         p.2740

     | 42    .         .         .         .         .         .    g.549355
 CAG | GTCACTTGGAAACCCCCACTCATCCAGAACGGAGACATACTTAGCTATGAGATTCAC    c.8280
 Q   | V  T  W  K  P  P  L  I  Q  N  G  D  I  L  S  Y  E  I  H      p.2760

          .         .         .         .         .         .       g.549415
 ATGCCTGACCCTCACATCACTTTAACCAATGTGACTTCCGCAGTGTTAAGTCAAAAAGTT       c.8340
 M  P  D  P  H  I  T  L  T  N  V  T  S  A  V  L  S  Q  K  V         p.2780

          .         .         .         .         .         .       g.549475
 ACTCATCTGATTCCTTTCACTAATTATTCTGTCACCATTGTTGCTTGCTCAGGGGGTAAT       c.8400
 T  H  L  I  P  F  T  N  Y  S  V  T  I  V  A  C  S  G  G  N         p.2800

          .         .         .         .         .         .       g.549535
 GGGTACCTTGGAGGGTGCACAGAGAGTTTACCTACCTATGTTACCACTCACCCCACCGTA       c.8460
 G  Y  L  G  G  C  T  E  S  L  P  T  Y  V  T  T  H  P  T  V         p.2820

          .         .         .         .         .         .       g.549595
 CCTCAGAATGTTGGCCCATTGTCTGTGATTCCACTAAGTGAATCATATGTTGTGATTTCT       c.8520
 P  Q  N  V  G  P  L  S  V  I  P  L  S  E  S  Y  V  V  I  S         p.2840

          .         .         .         | 43         .         .    g.550538
 TGGCAACCACCATCCAAGCCAAATGGACCTAATTTGAG | ATATGAGCTTCTGAGACGTAAA    c.8580
 W  Q  P  P  S  K  P  N  G  P  N  L  R  |  Y  E  L  L  R  R  K      p.2860

          .         .         .         .         .         .       g.550598
 ATCCAGCAGCCACTTGCATCAAATCCCCCAGAAGATTTAAATCGGTGGCACAATATTTAT       c.8640
 I  Q  Q  P  L  A  S  N  P  P  E  D  L  N  R  W  H  N  I  Y         p.2880

          .         .         .         .  | 44      .         .    g.561245
 TCAGGAACTCAGTGGCTTTATGAAGATAAGGGTCTTAGCAG | GTTTACAACCTATGAATAT    c.8700
 S  G  T  Q  W  L  Y  E  D  K  G  L  S  R  |  F  T  T  Y  E  Y      p.2900

          .         .         .         .         .         .       g.561305
 ATGCTCTTCGTACACAACAGTGTGGGTTTTACACCGAGCCGAGAAGTGACTGTGACAACG       c.8760
 M  L  F  V  H  N  S  V  G  F  T  P  S  R  E  V  T  V  T  T         p.2920

          .         .         .         .         .         .       g.561365
 TTAGCTGGTCTTCCAGAGAGAGGAGCCAATCTCACTGCGAGTGTCCTTAACCACACAGCC       c.8820
 L  A  G  L  P  E  R  G  A  N  L  T  A  S  V  L  N  H  T  A         p.2940

          .         .      | 45  .         .         .         .    g.582398
 ATCGACGTGAGGTGGGCTAAACCAA | CTGTTCAAGACCTACAAGGTGAAGTTGAATATTAC    c.8880
 I  D  V  R  W  A  K  P  T |   V  Q  D  L  Q  G  E  V  E  Y  Y      p.2960

          .         .         .         .         .         .       g.582458
 ACACTTTTTTGGAGTTCTGCTACCTCAAACGACTCTCTAAAAATCTTGCCAGATGTAAAC       c.8940
 T  L  F  W  S  S  A  T  S  N  D  S  L  K  I  L  P  D  V  N         p.2980

          .         .         .         .         .         .       g.582518
 TCTCATGTCATTGGCCACCTAAAGCCAAACACAGAGTATTGGATCTTTATCTCTGTCTTC       c.9000
 S  H  V  I  G  H  L  K  P  N  T  E  Y  W  I  F  I  S  V  F         p.3000

          .         .         .         .         .      | 46  .    g.583905
 AATGGAGTCCACAGCATCAACAGTGCAGGACTTCATGCAACCACTTGCGATGGGG | AGCCT    c.9060
 N  G  V  H  S  I  N  S  A  G  L  H  A  T  T  C  D  G  E |   P      p.3020

          .         .         .         .         .         .       g.583965
 CAGGGCATGCTTCCTCCAGAGGTTGTCATCATCAACAGTACAGCTGTACGTGTCATCTGG       c.9120
 Q  G  M  L  P  P  E  V  V  I  I  N  S  T  A  V  R  V  I  W         p.3040

          .         .         .         .         .         .       g.584025
 ACATCTCCTTCAAACCCAAATGGTGTTGTCACTGAGTATTCTATCTATGTAAATAATAAG       c.9180
 T  S  P  S  N  P  N  G  V  V  T  E  Y  S  I  Y  V  N  N  K         p.3060

          .         .         .         .         .         .       g.584085
 CTCTACAAGACTGGAATGAATGTGCCTGGGTCGTTTATTCTGAGAGACCTGTCTCCCTTC       c.9240
 L  Y  K  T  G  M  N  V  P  G  S  F  I  L  R  D  L  S  P  F         p.3080

          .         | 47         .         .         .         .    g.590335
 ACTATCTATGACATTCAG | GTTGAAGTCTGCACAATATATGCCTGCGTGAAAAGCAATGGA    c.9300
 T  I  Y  D  I  Q   | V  E  V  C  T  I  Y  A  C  V  K  S  N  G      p.3100

          .         .         .         .         .         .       g.590395
 ACCCAAATTACCACTGTGGAAGACACTCCAAGTGATATACCAACACCCACAATTCGTGGC       c.9360
 T  Q  I  T  T  V  E  D  T  P  S  D  I  P  T  P  T  I  R  G         p.3120

          .  | 48      .         .         .         .         .    g.611250
 ATCACTTCAAG | ATCTCTTCAAATTGATTGGGTGTCTCCACGGAAGCCAAATGGCATCATT    c.9420
 I  T  S  R  |  S  L  Q  I  D  W  V  S  P  R  K  P  N  G  I  I      p.3140

          .         .         .         .         .         .       g.611310
 CTTGGATATGATCTCCTATGGAAAACATGGTATCCATGCGCTAAAACTCAAAAGTTAGTG       c.9480
 L  G  Y  D  L  L  W  K  T  W  Y  P  C  A  K  T  Q  K  L  V         p.3160

          .         .         .         .         .         .       g.611370
 CAGGATCAGAGTGATGAGCTCTGCAAGGCAGTGAGGTGTCAAAAACCTGAATCTATCTGT       c.9540
 Q  D  Q  S  D  E  L  C  K  A  V  R  C  Q  K  P  E  S  I  C         p.3180

          .         .         . | 49       .         .         .    g.614522
 GGACACATTTGCTATTCTTCTGAAGCTAAG | GTTTGTTGTAACGGAGTGCTCTATAACCCC    c.9600
 G  H  I  C  Y  S  S  E  A  K   | V  C  C  N  G  V  L  Y  N  P      p.3200

          .         .         .         .         .         .       g.614582
 AAGCCTGGACATCGCTGTTGTGAAGAAAAGTATATCCCGTTTGTTCTGAATTCTACTGGA       c.9660
 K  P  G  H  R  C  C  E  E  K  Y  I  P  F  V  L  N  S  T  G         p.3220

          .         .         .         .         .         .       g.614642
 GTTTGTTGTGGTGGCCGAATACAGGAGGCACAACCAAATCATCAGTGCTGCTCTGGGTAT       c.9720
 V  C  C  G  G  R  I  Q  E  A  Q  P  N  H  Q  C  C  S  G  Y         p.3240

          .          | 50        .         .         .         .    g.629312
 TACGCTAGAATTCTACCAG | GTGAAGTATGCTGTCCAGATGAACAGCACAATCGGGTTTCT    c.9780
 Y  A  R  I  L  P  G |   E  V  C  C  P  D  E  Q  H  N  R  V  S      p.3260

          .         .         .         .         .         .       g.629372
 GTTGGCATTGGTGATTCCTGCTGTGGCAGAATGCCGTACTCCACCTCAGGAAACCAGATT       c.9840
 V  G  I  G  D  S  C  C  G  R  M  P  Y  S  T  S  G  N  Q  I         p.3280

          .         .         .         .         .         .       g.629432
 TGCTGTGCTGGGAGGCTTCATGATGGCCATGGCCAGAAGTGCTGTGGCAGACAGATTGTG       c.9900
 C  C  A  G  R  L  H  D  G  H  G  Q  K  C  C  G  R  Q  I  V         p.3300

          .         .         .         .         .         | 51    g.638116
 AGCAACGATTTAGAGTGTTGTGGTGGAGAAGAAGGAGTGGTGTACAATCGCCTTCCAG | GT    c.9960
 S  N  D  L  E  C  C  G  G  E  E  G  V  V  Y  N  R  L  P  G |       p.3320

          .         .         .         .         .         .       g.638176
 ATGTTCTGTTGTGGGCAGGATTATGTGAATATGTCAGATACCATATGCTGCTCAGCTTCC       c.10020
 M  F  C  C  G  Q  D  Y  V  N  M  S  D  T  I  C  C  S  A  S         p.3340

          .         .         .         .         .         .       g.638236
 AGTGGAGAGTCTAAAGCACATATTAAAAAGAATGACCCGGTGCCAGTAAAATGCTGTGAG       c.10080
 S  G  E  S  K  A  H  I  K  K  N  D  P  V  P  V  K  C  C  E         p.3360

          .         .         .         .         .         .       g.638296
 ACTGAACTTATTCCAAAGAGCCAGAAATGCTGTAATGGAGTTGGATATAATCCTTTGAAA       c.10140
 T  E  L  I  P  K  S  Q  K  C  C  N  G  V  G  Y  N  P  L  K         p.3380

          .         .         .         .   | 52     .         .    g.641540
 TATGTTTGCTCTGACAAGATTTCAACTGGAATGATGATGAAG | GAAACCAAAGAGTGCAGG    c.10200
 Y  V  C  S  D  K  I  S  T  G  M  M  M  K   | E  T  K  E  C  R      p.3400

          .         .         .         .         .         .       g.641600
 ATCCTCTGCCCAGCATCTATGGAAGCCACAGAACATTGTGGCAGGTGTGACTTCAACTTT       c.10260
 I  L  C  P  A  S  M  E  A  T  E  H  C  G  R  C  D  F  N  F         p.3420

          .         .         .         .         .         .       g.641660
 ACCAGCCACATTTGCACTGTGATAAGAGGGTCTCACAATTCCACAGGGAAGGCATCAATT       c.10320
 T  S  H  I  C  T  V  I  R  G  S  H  N  S  T  G  K  A  S  I         p.3440

          .         .         .         .         .         .       g.641720
 GAAGAAATGTGTTCATCTGCCGAAGAAACCATTCATACAGGGAGTGTAAACACGTACTCT       c.10380
 E  E  M  C  S  S  A  E  E  T  I  H  T  G  S  V  N  T  Y  S         p.3460

         | 53.         .         .         .         .         .    g.645514
 TACACAG | ATGTGAACCTCAAGCCCTACATGACATATGAGTACAGGATTTCTGCCTGGAAC    c.10440
 Y  T  D |   V  N  L  K  P  Y  M  T  Y  E  Y  R  I  S  A  W  N      p.3480

          .         .         .         .         .         .       g.645574
 AGCTATGGGCGAGGACTCAGCAAAGCTGTGAGAGCCAGAACAAAAGAAGATGTGCCTCAA       c.10500
 S  Y  G  R  G  L  S  K  A  V  R  A  R  T  K  E  D  V  P  Q         p.3500

          .         .         .         .         .         .       g.645634
 GGAGTGAGTCCCCCTACGTGGACCAAAATAGACAATCTTGAAGATACAATTGTCTTAAAC       c.10560
 G  V  S  P  P  T  W  T  K  I  D  N  L  E  D  T  I  V  L  N         p.3520

          .         .      | 54  .         .         .         .    g.646235
 TGGAGAAAACCTATACAATCAAATG | GTCCTATTATTTACTACATCCTTCTTCGAAATGGA    c.10620
 W  R  K  P  I  Q  S  N  G |   P  I  I  Y  Y  I  L  L  R  N  G      p.3540

          .         .         .         .         .         .       g.646295
 ATTGAACGTTTTCGGGGAACATCACTGAGCTTCTCTGATAAAGAGGGAATTCAACCATTT       c.10680
 I  E  R  F  R  G  T  S  L  S  F  S  D  K  E  G  I  Q  P  F         p.3560

          .         .         .         .         .         .       g.646355
 CAGGAATATTCATATCAGCTGAAAGCTTGCACGGTTGCTGGCTGTGCCACCAGTAGCAAG       c.10740
 Q  E  Y  S  Y  Q  L  K  A  C  T  V  A  G  C  A  T  S  S  K         p.3580

  | 55       .         .         .         .         .         .    g.648415
  | GTAGTTGCAGCTACTACCCAAGGAGTTCCGGAGAGCATCCTGCCACCAAGCATCACAGCC    c.10800
  | V  V  A  A  T  T  Q  G  V  P  E  S  I  L  P  P  S  I  T  A      p.3600

          .         .         .         .         .         .       g.648475
 CTAAGTGCAGTGGCTCTGCATCTGAGCTGGAGTGTCCCTGAGAAATCAAACGGCGTCATT       c.10860
 L  S  A  V  A  L  H  L  S  W  S  V  P  E  K  S  N  G  V  I         p.3620

          .         .         .         .         .         .       g.648535
 AAAGAGTACCAGATCAGGCAGGTTGGGAAAGGTCTCATCCACACTGACACCACTGACAGG       c.10920
 K  E  Y  Q  I  R  Q  V  G  K  G  L  I  H  T  D  T  T  D  R         p.3640

          .          | 56        .         .         .         .    g.661649
 AGACAGCATACGGTCACAG | GTCTCCAGCCATACACCAACTACAGCTTCACTCTTACAGCT    c.10980
 R  Q  H  T  V  T  G |   L  Q  P  Y  T  N  Y  S  F  T  L  T  A      p.3660

          .         .         .         .         .         .       g.661709
 TGTACATCTGCTGGGTGCACTTCAAGCGAGCCTTTTCTAGGTCAGACACTGCAGGCAGCT       c.11040
 C  T  S  A  G  C  T  S  S  E  P  F  L  G  Q  T  L  Q  A  A         p.3680

         | 57.         .         .         .         .         .    g.668606
 CCTGAAG | GAGTTTGGGTGACACCTCGACACATTATCATCAATTCTACAACAGTGGAATTA    c.11100
 P  E  G |   V  W  V  T  P  R  H  I  I  I  N  S  T  T  V  E  L      p.3700

          .         .         .         .         .         .       g.668666
 TATTGGAGTCTGCCAGAAAAGCCCAATGGCCTCGTTTCTCAATATCAATTGAGTCGTAAT       c.11160
 Y  W  S  L  P  E  K  P  N  G  L  V  S  Q  Y  Q  L  S  R  N         p.3720

          .         .         .         .         .         .       g.668726
 GGAAACTTGCTTTTCCTGGGTGGCAGTGAGGAGCAGAATTTCACTGATAAAAACCTGGAG       c.11220
 G  N  L  L  F  L  G  G  S  E  E  Q  N  F  T  D  K  N  L  E         p.3740

          .  | 58      .         .         .         .         .    g.669693
 CCCAATAGCAG | ATACACTTACAAGTTAGAAGTCAAAACTGGAGGTGGCAGCAGTGCTAGT    c.11280
 P  N  S  R  |  Y  T  Y  K  L  E  V  K  T  G  G  G  S  S  A  S      p.3760

          .         .         .         .         .         .       g.669753
 GATGATTACATTGTTCAAACACCTATGTCAACACCAGAAGAAATCTATCCTCCATATAAT       c.11340
 D  D  Y  I  V  Q  T  P  M  S  T  P  E  E  I  Y  P  P  Y  N         p.3780

          .         .         .         .          | 59        .    g.685072
 ATCACAGTAATTGGGCCTTATTCTATATTTGTAGCTTGGATACCACCAG | GGATCCTCATC    c.11400
 I  T  V  I  G  P  Y  S  I  F  V  A  W  I  P  P  G |   I  L  I      p.3800

          .         .         .         .         .         .       g.685132
 CCCGAAATTCCTGTGGAGTACAATGTCTTACTCAATGATGGAAGTGTAACACCTCTGGCC       c.11460
 P  E  I  P  V  E  Y  N  V  L  L  N  D  G  S  V  T  P  L  A         p.3820

          .         .         .         .         .         .       g.685192
 TTCTCCGTTGGTCATCATCAATCCACCCTTCTGGAAAATTTGACTCCATTCACACAGTAT       c.11520
 F  S  V  G  H  H  Q  S  T  L  L  E  N  L  T  P  F  T  Q  Y         p.3840

          .         .         | 60         .         .         .    g.686891
 GAGATAAGGATACAAGCATGTCAAAATG | GAAGTTGTGGAGTTAGCAGTAGGATGTTTGTC    c.11580
 E  I  R  I  Q  A  C  Q  N  G |   S  C  G  V  S  S  R  M  F  V      p.3860

          .         .         .         .         .         .       g.686951
 AAAACACCTGAAGCAGCCCCAATGGATCTTAATTCTCCTGTTCTTAAGGCACTGGGGTCA       c.11640
 K  T  P  E  A  A  P  M  D  L  N  S  P  V  L  K  A  L  G  S         p.3880

          .         .         .         .         .         .       g.687011
 GCTTGCATAGAGATTAAGTGGATGCCACCTGAAAAACCAAATGGAATCATCATCAACTAC       c.11700
 A  C  I  E  I  K  W  M  P  P  E  K  P  N  G  I  I  I  N  Y         p.3900

          .  | 61      .         .         .         .         .    g.700061
 TTTATTTACAG | ACGCCCTGCTGGCATTGAAGAGGAGTCTGTTTTATTTGTCTGGTCAGAA    c.11760
 F  I  Y  R  |  R  P  A  G  I  E  E  E  S  V  L  F  V  W  S  E      p.3920

          .         .         .         .         .         .       g.700121
 GGAGCCCTTGAATTTATGGATGAAGGAGACACCCTGAGGCCTTTCACACTCTACGAATAT       c.11820
 G  A  L  E  F  M  D  E  G  D  T  L  R  P  F  T  L  Y  E  Y         p.3940

          .         .         .         .         .         .       g.700181
 CGGGTCAGAGCCTGTAACTCCAAGGGTTCAGTGGAGAGTCTGTGGTCATTAACACAAACT       c.11880
 R  V  R  A  C  N  S  K  G  S  V  E  S  L  W  S  L  T  Q  T         p.3960

          .         .         .         .         .         .       g.700241
 CTGGAAGCTCCACCTCAAGATTTTCCAGCTCCTTGGGCTCAAGCCACGAGTGCTCATTCA       c.11940
 L  E  A  P  P  Q  D  F  P  A  P  W  A  Q  A  T  S  A  H  S         p.3980

          .         .         .         .         .         .       g.700301
 GTTCTGTTGAATTGGACAAAGCCAGAATCTCCCAATGGCATTATCTCCCATTACCGTGTG       c.12000
 V  L  L  N  W  T  K  P  E  S  P  N  G  I  I  S  H  Y  R  V         p.4000

          .         .         .         .         .         .       g.700361
 GTCTACCAGGAGAGACCCGACGATCCTACATTTAACAGCCCTACCGTGCATGCTTTCACA       c.12060
 V  Y  Q  E  R  P  D  D  P  T  F  N  S  P  T  V  H  A  F  T         p.4020

        | 62 .         .         .         .         .         .    g.748074
 GTGAAG | GGAACAAGCCATCAAGCCCACCTGTACGGGTTAGAACCATTCACAACATATCGC    c.12120
 V  K   | G  T  S  H  Q  A  H  L  Y  G  L  E  P  F  T  T  Y  R      p.4040

          .         .         .         .         .         .       g.748134
 ATTGGTGTTGTGGCTGCAAACCATGCAGGAGAAATTTTAAGCCCTTGGACTCTGATTCAA       c.12180
 I  G  V  V  A  A  N  H  A  G  E  I  L  S  P  W  T  L  I  Q         p.4060

          .         .         .         .         .         .       g.748194
 ACCTTAGAATCTTCCCCAAGTGGACTGAGAAACTTTATAGTAGAACAGAAAGAGAATGGC       c.12240
 T  L  E  S  S  P  S  G  L  R  N  F  I  V  E  Q  K  E  N  G         p.4080

          .         .         .         .         .     | 63   .    g.752786
 CGGGCATTGCTACTACAGTGGTCAGAACCTATGAGAACCAATGGTGTGATTAAG | ACATAC    c.12300
 R  A  L  L  L  Q  W  S  E  P  M  R  T  N  G  V  I  K   | T  Y      p.4100

          .         .         .         .         .         .       g.752846
 AACATCTTCAGTGACGGGTTCCTGGAGTACTCTGGTTTGAATCGTCAGTTTCTCTTCCGC       c.12360
 N  I  F  S  D  G  F  L  E  Y  S  G  L  N  R  Q  F  L  F  R         p.4120

          .         .         .         .         .         .       g.752906
 CGCCTGGATCCTTTCACTCTCTACACACTGACCCTGGAGGCCTGCACCAGAGCAGGTTGT       c.12420
 R  L  D  P  F  T  L  Y  T  L  T  L  E  A  C  T  R  A  G  C         p.4140

          .         .         .         .         .         .       g.752966
 GCACACTCGGCGCCTCAGCCTCTGTGGACAGATGAAGCCCCTCCAGACTCTCAGCTGGCT       c.12480
 A  H  S  A  P  Q  P  L  W  T  D  E  A  P  P  D  S  Q  L  A         p.4160

          .         .         .         .         .         .       g.753026
 CCTACTGTCCACTCTGTGAAGTCCACCAGTGTTGAGCTGAGCTGGTCTGAGCCTGTTAAC       c.12540
 P  T  V  H  S  V  K  S  T  S  V  E  L  S  W  S  E  P  V  N         p.4180

          .         .         .         .         .         .       g.753086
 CCAAATGGAAAAATAATTCGCTATGAAGTGATTCGCAGATGCTTCGAGGGAAAAGCTTGG       c.12600
 P  N  G  K  I  I  R  Y  E  V  I  R  R  C  F  E  G  K  A  W         p.4200

          .         .         .         .         .         .       g.753146
 GGAAATCAGACGATCCAGGCCGACGAGAAAATTGTTTTCACAGAATATAACACTGAAAGG       c.12660
 G  N  Q  T  I  Q  A  D  E  K  I  V  F  T  E  Y  N  T  E  R         p.4220

          .         .         .         .         .         .       g.753206
 AATACATTTATGTATAATGACACAGGTTTGCAACCATGGACGCAGTGTGAATATAAAATC       c.12720
 N  T  F  M  Y  N  D  T  G  L  Q  P  W  T  Q  C  E  Y  K  I         p.4240

          .         .         .         .         .         .       g.753266
 TACACTTGGAATTCAGCTGGGCATACCTGTAGCTCTTGGAATGTGGTGAGGACATTGCAA       c.12780
 Y  T  W  N  S  A  G  H  T  C  S  S  W  N  V  V  R  T  L  Q         p.4260

          .         .         .         .         .         .       g.753326
 GCACCTCCAGAAGGTCTCTCTCCACCTGTGATATCCTATGTTTCTATGAATCCCCAAAAA       c.12840
 A  P  P  E  G  L  S  P  P  V  I  S  Y  V  S  M  N  P  Q  K         p.4280

          .         .         .         .         .         .       g.753386
 CTGCTGATTTCCTGGATCCCACCAGAACAGTCTAATGGTATTATCCAGTCCTATAGGCTT       c.12900
 L  L  I  S  W  I  P  P  E  Q  S  N  G  I  I  Q  S  Y  R  L         p.4300

          .         .         .         .         .         .       g.753446
 CAAAGGAATGAAATGCTCTATCCTTTTAGCTTTGATCCTGTGACTTTCAATTACACTGAT       c.12960
 Q  R  N  E  M  L  Y  P  F  S  F  D  P  V  T  F  N  Y  T  D         p.4320

          .         .         .         .         .         .       g.753506
 GAAGAGCTTCTTCCTTTTTCCACCTATAGCTATGCACTCCAAGCCTGCACGAGTGGAGGA       c.13020
 E  E  L  L  P  F  S  T  Y  S  Y  A  L  Q  A  C  T  S  G  G         p.4340

          .         .         .         .         .         .       g.753566
 TGCTCCACCAGCAAACCCACCAGCATCACAACTCTGGAGGCTGCTCCATCAGAAGTCAGC       c.13080
 C  S  T  S  K  P  T  S  I  T  T  L  E  A  A  P  S  E  V  S         p.4360

          .         .         .         .         .         .       g.753626
 CCTCCAGATCTTTGGGCCGTCAGTGCCACTCAAATGAATGTATGTTGGTCACCGCCCACA       c.13140
 P  P  D  L  W  A  V  S  A  T  Q  M  N  V  C  W  S  P  P  T         p.4380

          .         .         .         .         .         .       g.753686
 GTGCAAAATGGAAAGATTACTAAATATTTAGTTAGATATGATAATAAAGAGTCCCTTGCT       c.13200
 V  Q  N  G  K  I  T  K  Y  L  V  R  Y  D  N  K  E  S  L  A         p.4400

          .         .         .         .         .         .       g.753746
 GGCCAGGGCCTGTGCCTGCTGGTTTCCCACCTGCAGCCTTACTCTCAGTATAACTTCTCC       c.13260
 G  Q  G  L  C  L  L  V  S  H  L  Q  P  Y  S  Q  Y  N  F  S         p.4420

          .         .         .         .         .         .       g.753806
 CTTGTAGCCTGCACGAATGGAGGTTGCACAGCTAGTGTGTCAAAATCTGCCTGGACAATG       c.13320
 L  V  A  C  T  N  G  G  C  T  A  S  V  S  K  S  A  W  T  M         p.4440

          .         .         .         .         .         .       g.753866
 GAGGCCCTGCCAGAGAACATGGACTCTCCAACATTGCAAGTCACAGGCTCAGAATCAATA       c.13380
 E  A  L  P  E  N  M  D  S  P  T  L  Q  V  T  G  S  E  S  I         p.4460

          .         .         .         .         .         .       g.753926
 GAAATCACCTGGAAACCTCCAAGAAACCCAAATGGCCAGATCAGAAGTTATGAACTTAGG       c.13440
 E  I  T  W  K  P  P  R  N  P  N  G  Q  I  R  S  Y  E  L  R         p.4480

          .         .         .         .         .         .       g.753986
 AGGGATGGAACCATTGTATATACAGGCTTGGAAACACGCTATCGTGATTTTACTCTCACC       c.13500
 R  D  G  T  I  V  Y  T  G  L  E  T  R  Y  R  D  F  T  L  T         p.4500

          .         .         .         .         .         .       g.754046
 CCAGGTGTGGAGTATAGCTACACAGTAACTGCCAGCAACAGCCAAGGGGGTATTTTGAGT       c.13560
 P  G  V  E  Y  S  Y  T  V  T  A  S  N  S  Q  G  G  I  L  S         p.4520

          .         .         .         .         .         .       g.754106
 CCTCTTGTCAAAGATCGAACCAGCCCCTCAGCACCCTCAGGGATGGAACCTCCAAAATTG       c.13620
 P  L  V  K  D  R  T  S  P  S  A  P  S  G  M  E  P  P  K  L         p.4540

          .         .         .         .         .         .       g.754166
 CAGGCCAGGGGTCCTCAGGAGATCTTAGTGAACTGGGACCCTCCAGTGAGAACAAATGGT       c.13680
 Q  A  R  G  P  Q  E  I  L  V  N  W  D  P  P  V  R  T  N  G         p.4560

          .         .         .         .         .         .       g.754226
 GATATCATCAATTATACCCTCTTCATCCGTGAACTATTTGAAAGAGAAACTAAAATCATA       c.13740
 D  I  I  N  Y  T  L  F  I  R  E  L  F  E  R  E  T  K  I  I         p.4580

          .         .         .         .         .         .       g.754286
 CACATAAACACAACTCATAATTCTTTTGGTATGCAGTCATATATAGTAAACCAGCTGAAG       c.13800
 H  I  N  T  T  H  N  S  F  G  M  Q  S  Y  I  V  N  Q  L  K         p.4600

          .  | 64      .         .         .         .         .    g.757152
 CCATTTCACAG | GTATGAAATACGAATTCAAGCGTGCACCACCCTGGGATGTGCATCAAGT    c.13860
 P  F  H  R  |  Y  E  I  R  I  Q  A  C  T  T  L  G  C  A  S  S      p.4620

          .         .         .         .         .         .       g.757212
 GACTGGACATTCATACAGACCCCTGAGATTGCACCTTTGATGCAACCCCCTCCACATCTG       c.13920
 D  W  T  F  I  Q  T  P  E  I  A  P  L  M  Q  P  P  P  H  L         p.4640

          .         .         .         .         .         .       g.757272
 GAGGTACAAATGGCTCCAGGAGGATTCCAGCCAACTGTTTCTCTTTTGTGGACAGGACCG       c.13980
 E  V  Q  M  A  P  G  G  F  Q  P  T  V  S  L  L  W  T  G  P         p.4660

          .         .         .         .         .         .       g.757332
 CTGCAGCCAAATGGAAAAGTTTTGTATTACGAATTATACAGAAGACAAATAGCAACTCAG       c.14040
 L  Q  P  N  G  K  V  L  Y  Y  E  L  Y  R  R  Q  I  A  T  Q         p.4680

          .         .         .         .         .         .       g.757392
 CCTAGAAAATCCAATCCAGTCCTAATCTATAACGGAAGCTCAACATCTTTTATAGATTCC       c.14100
 P  R  K  S  N  P  V  L  I  Y  N  G  S  S  T  S  F  I  D  S         p.4700

          .         .         .    | 65    .         .         .    g.777622
 GAACTATTGCCTTTCACAGAGTATGAGTATCAG | GTCTGGGCAGTGAATTCTGCAGGAAAA    c.14160
 E  L  L  P  F  T  E  Y  E  Y  Q   | V  W  A  V  N  S  A  G  K      p.4720

          .         .         .         .         .         .       g.777682
 GCCCCCAGTAGCTGGACATGGTGCAGAACCGGGCCAGCCCCACCAGAAGGTCTCAGAGCC       c.14220
 A  P  S  S  W  T  W  C  R  T  G  P  A  P  P  E  G  L  R  A         p.4740

          .         .         .         .         .         .       g.777742
 CCCACGTTCCATGTGATCTCTTCTACCCAAGCAGTGGTCAACATCAGTGCCCCTGGGAAG       c.14280
 P  T  F  H  V  I  S  S  T  Q  A  V  V  N  I  S  A  P  G  K         p.4760

          .         .         .         .         .         .       g.777802
 CCCAACGGGATCGTCAGTCTCTACAGGCTGTTCTCCAGCAGCGCCCATGGGGCTGAGACA       c.14340
 P  N  G  I  V  S  L  Y  R  L  F  S  S  S  A  H  G  A  E  T         p.4780

     | 66    .         .         .         .         .         .    g.779687
 GTG | CTATCCGAAGGCATGGCCACCCAGCAGACTCTCCATGGCCTTCAAGCCTTCACTAAC    c.14400
 V   | L  S  E  G  M  A  T  Q  Q  T  L  H  G  L  Q  A  F  T  N      p.4800

          .         .         .         .         .         .       g.779747
 TACTCTATTGGAGTAGAGGCCTGCACCTGCTTCAACTGTTGCAGCAAAGGACCGACAGCT       c.14460
 Y  S  I  G  V  E  A  C  T  C  F  N  C  C  S  K  G  P  T  A         p.4820

          .         .         .         .         .         .       g.779807
 GAACTGAGAACCCATCCTGCCCCACCCTCAGGACTGTCCTCTCCACAAATCGGGACGCTG       c.14520
 E  L  R  T  H  P  A  P  P  S  G  L  S  S  P  Q  I  G  T  L         p.4840

          .         .         .         .         .         .       g.779867
 GCCTCAAGGACGGCCTCCTTCCGGTGGAGTCCCCCCATGTTCCCCAATGGTGTCATTCAC       c.14580
 A  S  R  T  A  S  F  R  W  S  P  P  M  F  P  N  G  V  I  H         p.4860

    | 67     .         .         .         .         .         .    g.780724
 AG | CTATGAACTCCAATTCCACGTGGCTTGCCCTCCTGACTCAGCCCTCCCCTGTACTCCC    c.14640
 S  |  Y  E  L  Q  F  H  V  A  C  P  P  D  S  A  L  P  C  T  P      p.4880

          .         .         .         .         .         .       g.780784
 AGCCAAATAGAAACAAAGTACACGGGGCTGGGGCAGAAAGCCAGCCTTGGGGGTCTCCAG       c.14700
 S  Q  I  E  T  K  Y  T  G  L  G  Q  K  A  S  L  G  G  L  Q         p.4900

          .         .         .         .         .         .       g.780844
 CCCTACACCACATACAAGCTGAGAGTGGTGGCACACAACGAGGTGGGCAGTACGGCTTCC       c.14760
 P  Y  T  T  Y  K  L  R  V  V  A  H  N  E  V  G  S  T  A  S         p.4920

          .         .         .  | 68      .         .         .    g.787691
 GAGTGGATCAGTTTCACCACCCAAAAAGAAT | TGCCTCAGTACCGAGCCCCATTTTCGGTG    c.14820
 E  W  I  S  F  T  T  Q  K  E  L |   P  Q  Y  R  A  P  F  S  V      p.4940

          .         .         .         .         .         .       g.787751
 GACAGCAATTTGTCTGTGGTGTGTGTGAACTGGAGTGACACCTTCCTCCTGAACGGCCAA       c.14880
 D  S  N  L  S  V  V  C  V  N  W  S  D  T  F  L  L  N  G  Q         p.4960

          .         .         .         .         .         .       g.787811
 CTGAAGGAGTACGTGTTAACCGACGGAGGGCGACGCGTGTACAGCGGCTTGGACACCACC       c.14940
 L  K  E  Y  V  L  T  D  G  G  R  R  V  Y  S  G  L  D  T  T         p.4980

          .         .         | 69         .         .         .    g.789190
 CTCTACATACCGAGAACGGCGGACAAAA | CCTTCTTTTTCCAGGTCATCTGCACGACTGAC    c.15000
 L  Y  I  P  R  T  A  D  K  T |   F  F  F  Q  V  I  C  T  T  D      p.5000

          .         .         .         .         .   | 70     .    g.793701
 GAAGGAAGTGTTAAGACGCCGTTGATCCAATATGATACCTCTACTGGACTTG | GCTTGGTC    c.15060
 E  G  S  V  K  T  P  L  I  Q  Y  D  T  S  T  G  L  G |   L  V      p.5020

          .         .         .         .         .         .       g.793761
 CTAACAACTCCTGGGAAAAAGAAGGGATCGCGGAGCAAAAGCACAGAGTTCTACAGCGAG       c.15120
 L  T  T  P  G  K  K  K  G  S  R  S  K  S  T  E  F  Y  S  E         p.5040

          .         .         .         .         .         .       g.793821
 CTGTGGTTCATAGTGTTAATGGCGATGCTGGGCTTGATCTTGTTGGCCATTTTTCTGTCC       c.15180
 L  W  F  I  V  L  M  A  M  L  G  L  I  L  L  A  I  F  L  S         p.5060

          .         .         .         .         .         .       g.793881
 CTGATACTACAAAGAAAAATCCACAAAGAGCCATATATCAGAGAAAGACCTCCCTTGGTA       c.15240
 L  I  L  Q  R  K  I  H  K  E  P  Y  I  R  E  R  P  P  L  V         p.5080

          .         .         .         .         .        | 71.    g.799364
 CCTCTTCAGAAGAGGATGTCTCCATTGAATGTTTACCCACCGGGGGAAAACCATATG | GGG    c.15300
 P  L  Q  K  R  M  S  P  L  N  V  Y  P  P  G  E  N  H  M   | G      p.5100

          .         .         .         .         .         .       g.799424
 TTAGCCGATACCAAAATTCCCCGGTCTGGGACACCTGTGAGTATCCGCAGCAACCGGAGT       c.15360
 L  A  D  T  K  I  P  R  S  G  T  P  V  S  I  R  S  N  R  S         p.5120

          .         .         .         .         .         .       g.799484
 GCATGTGTCCTGCGCATCCCGAGTCAAAACCAAACCAGCCTAACCTACTCCCAGGGTTCT       c.15420
 A  C  V  L  R  I  P  S  Q  N  Q  T  S  L  T  Y  S  Q  G  S         p.5140

          .         .         .         .         .         .       g.799544
 CTTCACCGCAGCGTCAGCCAGCTCATGGACATTCAAGACAAGAAAGTCTTGATGGACAAC       c.15480
 L  H  R  S  V  S  Q  L  M  D  I  Q  D  K  K  V  L  M  D  N         p.5160

          .         .         .          | 72        .         .    g.802547
 TCACTGTGGGAAGCCATCATGGGCCACAACAGTGGACTG | TATGTGGATGAAGAGGACCTG    c.15540
 S  L  W  E  A  I  M  G  H  N  S  G  L   | Y  V  D  E  E  D  L      p.5180

          .         .         .         .         .         .       g.802607
 ATGAACGCCATCAAGGATTTCAGCTCAGTGACTAAGGAACGCACCACATTCACAGACACC       c.15600
 M  N  A  I  K  D  F  S  S  V  T  K  E  R  T  T  F  T  D  T         p.5200

                                                                    g.802616
 CACCTGTAA                                                          c.15609
 H  L  X                                                            p.5202

          .         .         .         .         .         .       g.802676
 aggatggaaacccagaagacgtaaccctggaatgcaaggtctgcacccatttcctcctgg       c.*60

          .         .         .         .         .         .       g.802736
 gttatcactcacacatcataaatgctgaaaagccattgtttattatcctataattcttta       c.*120

          .         .         .         .         .         .       g.802796
 aagaaatgatgactgtttttgaaagtgttccttcctaatagaggtctaagaaatgatatt       c.*180

          .         .         .         .         .         .       g.802856
 tttctcatcttaaatgagagagaatattcatatgaaaatacttgatttgctcttattttg       c.*240

          .         .         .         .         .         .       g.802916
 tagaagacaaagaagtatgtaattgtcacttggttctgtttggcagtgatgctcctggtt       c.*300

          .         .         .         .         .         .       g.802976
 aactgaataatcagtggcaatttcaagatggctcacagttgttagaagtagtaagttagt       c.*360

          .         .         .         .         .         .       g.803036
 tactggctcaaaaatgattctgttgaaaggatgtcactgctgttcatttctatctgccat       c.*420

          .         .         .         .         .         .       g.803096
 ttctgtcagggttgacacaatcctgcaagaatagttattctaatgatcacagctgctaaa       c.*480

          .         .         .         .         .         .       g.803156
 tgaatcccaaactttgcaccaggtcgacaaacttttctgaaggttctatttatttaccat       c.*540

          .         .         .         .         .         .       g.803216
 acatagggttacttaccaaactttttgacaaggctgaaggttctatttatttacaataca       c.*600

          .         .         .         .         .         .       g.803276
 tagggttactcaccaaactttttgacaaggcaacacataacttacacataaatgtctctg       c.*660

          .         .         .         .         .         .       g.803336
 ttcttgcatttatgaattttccaaaaatctaaggagtaaacagcttatttatacattttg       c.*720

          .         .         .         .         .         .       g.803396
 aggagaaaacaaagtgtttcactaggaacacctctacttgaaccaatgtttttatttcat       c.*780

          .         .         .         .         .         .       g.803456
 atattttatagttttgaaactagtttctcataaaattctgtcaattcactgaatatcaga       c.*840

          .         .         .         .         .         .       g.803516
 gaatactgacatcttcaacctagcacatttcaaatggaaactactgttctatttgcaata       c.*900

          .         .         .         .         .         .       g.803576
 ttaggctgcgtgaaattttaaaaggaaaaatgtatctgttccttctagcattaacatata       c.*960

          .         .         .         .         .         .       g.803636
 tacatgtagagacaagactatacctatgtgtatatatatgtatatcatgtatatattact       c.*1020

          .         .         .         .         .         .       g.803696
 ctgcactatatcccttctttttggagaactagccattattttagccacagaatcagtaag       c.*1080

          .         .         .         .         .         .       g.803756
 aacagatgatatgcaacagtaccaattacggttcaaaaatgtctgtcacctgctctagtt       c.*1140

          .         .         .         .         .         .       g.803816
 ggattacaaagtcattggtgaaagtcctatggcaagaaaaattttcttgcaaatcatcca       c.*1200

          .         .         .         .         .         .       g.803876
 cataaaatcagatatttaaatttgttcttcatggaaaacagagtaagaaaacctcttgtc       c.*1260

          .         .         .         .         .         .       g.803936
 ttccttcatccttaaaggtctttgtgaccccaggaaaatattgactctgtctaacacaca       c.*1320

          .         .         .         .         .         .       g.803996
 atagtcacaatactttttgtgaatctacaaccagagacaggcaaaaacttgtaaagtaag       c.*1380

          .         .         .         .         .         .       g.804056
 ggatagtcttacttattctgcctgaaaacaatgtattaccccagggcccaacagtaaaag       c.*1440

          .         .         .         .         .         .       g.804116
 attgtggactttttgggtattgagatttcatctagctctgtgagagagcagctcctcaga       c.*1500

          .         .         .         .         .         .       g.804176
 ctgaccaactcctagacaaagtttgccaaccataagtgtcaaaagcacaggccagtatta       c.*1560

          .         .         .         .         .         .       g.804236
 agcagaagttctaccaccttattagaactgctataaacaaaagcatctgaaataattgtg       c.*1620

          .         .         .         .         .         .       g.804296
 cacatctggcagtgactgtagaaaatacgaaatatatatttctcgccaagtttttatact       c.*1680

          .         .         .         .         .         .       g.804356
 ttctgaaatgaaaacataggattgactagtttactggtttttattcccatatgccgattc       c.*1740

          .         .         .         .         .         .       g.804416
 tgggacaataaagttgtttaaagctggcacaaataagcattaaccaaggctgtgtccacc       c.*1800

          .         .         .         .         .         .       g.804476
 ttctgtgagctacttaaggtatataggaaaggagtggtcacaaacttgcatcctaatcct       c.*1860

          .         .         .         .         .         .       g.804536
 tggtggactcttctaagaatacagtttgctagtcacaaagaatagtctacaaatatgctt       c.*1920

          .         .         .         .         .         .       g.804596
 tgctaggttcagaagattgagtttatcctgatttttgaaaaattaaccaggtatctttat       c.*1980

          .         .         .         .         .         .       g.804656
 cactgtgtatttttccaagcacagtataaaattttaacaacgcacaaaaaaatacagaac       c.*2040

          .         .         .         .         .         .       g.804716
 tgcaggggattttatcttggatcattatccatttaatcatctaattagacatgaactcag       c.*2100

          .         .         .         .         .         .       g.804776
 ttagctgaatcatttacattttgactccatagcttagggcagacagaagcctgtatggct       c.*2160

          .         .         .         .         .         .       g.804836
 tctgcccagaactctgtcccctgctacatgtctaagtttacttgtatttatttcagagaa       c.*2220

          .         .         .         .         .         .       g.804896
 gaactctaagatgttgctttgctactttaagtggtattgcgtgccaagcctctattatac       c.*2280

          .         .         .         .         .         .       g.804956
 aaaccatgcagactcgcctctagagattctgattcggttgatctggggtgtgtggctgag       c.*2340

          .         .         .         .         .         .       g.805016
 gcatcagtactttttaaagcttccaggtgttctaatgttgagacccactgatgttccaca       c.*2400

          .         .         .         .         .         .       g.805076
 atctggaagaaatcatgtacaggaataatatgctatgcacagggactatgctccttggct       c.*2460

          .         .         .         .         .         .       g.805136
 caccccttctcccttataaacaatgagcagttcttgatgaacctctttaaatttaaatct       c.*2520

          .         .         .         .         .         .       g.805196
 cctgactcacattttaccaattgtacatgccacattctcagcttacgaactaccatgttt       c.*2580

          .         .         .         .         .         .       g.805256
 tgttattcttaatatcaactgtttggtaagagtacagttgtttttatacactctaagaaa       c.*2640

          .         .         .         .         .         .       g.805316
 tgtgtttataatctactgtaatttccactaaatggaacccaaatattaatgttatggtac       c.*2700

          .         .         .         .         .         .       g.805376
 catatactgatgtaaaaatcatgctggcatccatgaacacaccggtaaataaaacatagt       c.*2760

          .         .         .         .         .         .       g.805436
 ccaagtggaagaattcattaataaggaacttttaattatgtcacaaatgaatagttggtt       c.*2820

          .         .         .         .         .         .       g.805496
 tccaatgcacaaatatcatgtaaactaatctaaagatggtttgcttaataaatatttgaa       c.*2880

                                                                    g.805503
 tgtgacc                                                            c.*2887

 (downstream sequence)
Legend:
Nucleotide numbering (following the rules of the HGVS for a 'Coding DNA Reference Sequence') is indicated at the right of the sequence, counting the A of the ATG translation initiating Methionine as 1. Every 10th nucleotide is indicated by a "." above the sequence. The Usher syndrome 2A (autosomal recessive, mild) protein sequence is shown below the coding DNA sequence, with numbering indicated at the right starting with 1 for the translation initiating Methionine. Every 10th amino acid is shown in bold. The position of introns is indicated by a vertical line, splitting the two exons. The start of the first exon (transcription initiation site) is indicated by a '\', the end of the last exon (poly-A addition site) by a '/'. The exon number is indicated above the first nucleotide(s) of the exon. To aid the description of frame shift variants, all stop codons in the +1 frame are shown in bold while all stop codons in the +2 frame are underlined.

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