(used for variant description)
(last modified September 4, 2020)
This file was created to facilitate the description of sequence variants on transcript NM_080629.2 in the COL11A1 gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NG_008033.2, covering COL11A1 transcript NM_080629.2.
(upstream sequence)
. g.5018
acacagtactctcagctt c.-301
. . . . . . g.5078
gttggtggaagcccctcatctgccttcattctgaaggcagggcccggcagaggaaggatc c.-241
. . . . . . g.5138
agagggtcgcggccggagggtcccggccggtggggccaactcagagggagaggaaagggc c.-181
. . . . . . g.5198
tagagacacgaagaacgcaaaccatcaaatttagaagaaaaagccctttgactttttccc c.-121
. . . . . . g.5258
cctctccctccccaatggctgtgtagcaaacatccctggcgataccttggaaaggacgaa c.-61
. . . . . . g.5318
gttggtctgcagtcgcaatttcgtgggttgagttcacagttgtgagtgcggggctcggag c.-1
. . . . . . g.5378
ATGGAGCCGTGGTCCTCTAGGTGGAAAACGAAACGGTGGCTCTGGGATTTCACCGTAACA c.60
M E P W S S R W K T K R W L W D F T V T p.20
. . . . | 02 . . g.30538
ACCCTCGCATTGACCTTCCTCTTCCAAGCTAGAGAGGTCAGAGGAG | CTGCTCCAGTTGAT c.120
T L A L T F L F Q A R E V R G A | A P V D p.40
. . . . . . g.30598
GTACTAAAAGCACTAGATTTTCACAATTCTCCAGAGGGAATATCAAAAACAACGGGATTT c.180
V L K A L D F H N S P E G I S K T T G F p.60
. . . . . . g.30658
TGCACAAACAGAAAGAATTCTAAAGGCTCAGATACTGCTTACAGAGTTTCAAAGCAAGCA c.240
C T N R K N S K G S D T A Y R V S K Q A p.80
. . . | 03 . . . g.34651
CAACTCAGTGCCCCAACAAAACAGTTATTTCCAG | GTGGAACTTTCCCAGAAGACTTTTCA c.300
Q L S A P T K Q L F P G | G T F P E D F S p.100
. . . . . . g.34711
ATACTATTTACAGTAAAACCAAAAAAAGGAATTCAGTCTTTCCTTTTATCTATATATAAT c.360
I L F T V K P K K G I Q S F L L S I Y N p.120
. . . . . . g.34771
GAGCATGGTATTCAGCAAATTGGTGTTGAGGTTGGGAGATCACCTGTTTTTCTGTTTGAA c.420
E H G I Q Q I G V E V G R S P V F L F E p.140
. . . . . . g.34831
GACCACACTGGAAAACCTGCCCCAGAAGACTATCCCCTCTTCAGAACTGTTAACATCGCT c.480
D H T G K P A P E D Y P L F R T V N I A p.160
| 04 . . . . . g.38768
GACGGGAA | GTGGCATCGGGTAGCAATCAGCGTGGAGAAGAAAACTGTGACAATGATTGTT c.540
D G K | W H R V A I S V E K K T V T M I V p.180
. . . . . . g.38828
GATTGTAAGAAGAAAACCACGAAACCACTTGATAGAAGTGAGAGAGCAATTGTTGATACC c.600
D C K K K T T K P L D R S E R A I V D T p.200
. . . . . | 05 . g.82261
AATGGAATCACGGTTTTTGGAACAAGGATTTTGGATGAAGAAGTTTTTGAG | GGGGACATT c.660
N G I T V F G T R I L D E E V F E | G D I p.220
. . . . . . g.82321
CAGCAGTTTTTGATCACAGGTGATCCCAAGGCAGCATATGACTACTGTGAGCATTATAGT c.720
Q Q F L I T G D P K A A Y D Y C E H Y S p.240
. . . . . . g.82381
CCAGACTGTGACTCTTCAGCACCCAAGGCTGCTCAAGCTCAGGAACCTCAGATAGATGAG c.780
P D C D S S A P K A A Q A Q E P Q I D E p.260
| 06 . . . . . . g.87604
| AAAAAGAAATCCAATTTCAAAAAGAAGATGAGGACAGTGGCTACTAAATCAAAGGAAAAA c.840
| K K K S N F K K K M R T V A T K S K E K p.280
. . . . . . g.87664
TCCAAAAAGTTTACACCCCCCAAATCTGAAAAATTTTCATCCAAGAAGAAGAAAAGTTAT c.900
S K K F T P P K S E K F S S K K K K S Y p.300
. . . | 07 . . . g.87910
CAAGCATCAGCAAAAGCCAAACTAGGGGTAAAG | GCAAACATCGTTGATGATTTTCAAGAA c.960
Q A S A K A K L G V K | A N I V D D F Q E p.320
. . . . . . g.87970
TACAACTATGGAACAATGGAAAGTTACCAGACAGAAGCTCCTAGGCATGTTTCTGGGACA c.1020
Y N Y G T M E S Y Q T E A P R H V S G T p.340
| 08 . . . . . . g.90554
AATGAG | CCAAATCCAGTTGAAGAAATATTTACTGAAGAATATCTAACGGGAGAGGATTAT c.1080
N E | P N P V E E I F T E E Y L T G E D Y p.360
. . . . . . g.90614
GATTCCCAGAGGAAAAATTCTGAGGATACACTATATGAAAACAAAGAAATAGACGGCAGG c.1140
D S Q R K N S E D T L Y E N K E I D G R p.380
. . . . . . g.90674
GATTCTGATCTTCTGGTAGATGGAGATTTAGGCGAATATGATTTTTATGAATATAAAGAA c.1200
D S D L L V D G D L G E Y D F Y E Y K E p.400
. . . . . . g.90734
TATGAAGATAAACCAACAAGCCCCCCTAATGAAGAATTTGGTCCAGGTGTACCAGCAGAA c.1260
Y E D K P T S P P N E E F G P G V P A E p.420
. . | 09 . . . . g.91766
ACTGATATTACAGAAACAAGC | ATAAATGGCCATGGTGCATATGGAGAGAAAGGACAGAAA c.1320
T D I T E T S | I N G H G A Y G E K G Q K p.440
. . | 10 . . . . g.94673
GGAGAACCAGCAGTGGTTGAGCCT | GGTATGCTTGTCGAAGGACCACCAGGACCAGCAGGA c.1380
G E P A V V E P | G M L V E G P P G P A G p.460
| 11 . . . . . . g.95668
CCTGCA | GGTATTATGGGTCCTCCAGGTCTACAAGGCCCCACTGGACCCCCTGGTGACCCT c.1440
P A | G I M G P P G L Q G P T G P P G D P p.480
| 12 . . . . . g.97805
GGCGATAGG | GGCCCCCCAGGACGTCCTGGCTTACCAGGGGCTGATGGTCTACCTGGTCCT c.1500
G D R | G P P G R P G L P G A D G L P G P p.500
. . | 13 . . . . g.98938
CCTGGTACTATGTTGATGTTACCG | TTCCGTTATGGTGGTGATGGTTCCAAAGGACCAACC c.1560
P G T M L M L P | F R Y G G D G S K G P T p.520
. . . . | 14 . g.101039
ATCTCTGCTCAGGAAGCTCAGGCTCAAGCTATTCTTCAGCAGGCTCGG | ATTGCTCTGAGA c.1620
I S A Q E A Q A Q A I L Q Q A R | I A L R p.540
. . . . | 15 . . g.104995
GGCCCACCTGGCCCAATGGGTCTAACTGGAAGACCAGGTCCTGTG | GGGGGGCCTGGTTCA c.1680
G P P G P M G L T G R P G P V | G G P G S p.560
. . . | 16 . . g.107202
TCTGGGGCCAAAGGTGAGAGTGGTGATCCAGGTCCTCAG | GGCCCTCGAGGCGTCCAGGGT c.1740
S G A K G E S G D P G P Q | G P R G V Q G p.580
. . . | 17 . . . g.107402
CCCCCTGGTCCAACGGGAAAACCTGGAAAAAGG | GGTCGTCCAGGTGCAGATGGAGGAAGA c.1800
P P G P T G K P G K R | G R P G A D G G R p.600
. . | 18. . . . g.107638
GGAATGCCAGGAGAACCTGGGGCAAAG | GGAGATCGAGGGTTTGATGGACTTCCGGGTCTG c.1860
G M P G E P G A K | G D R G F D G L P G L p.620
. . | 19 . . . . g.108874
CCAGGTGACAAAGGTCACAGG | GGTGAACGAGGTCCTCAAGGTCCTCCAGGTCCTCCTGGT c.1920
P G D K G H R | G E R G P Q G P P G P P G p.640
. | 20 . . . . . g.109053
GATGATGGAATGAGG | GGAGAAGATGGAGAAATTGGACCAAGAGGTCTTCCAGGTGAAGCT c.1980
D D G M R | G E D G E I G P R G L P G E A p.660
| 21 . . . . . | 22 . g.110711
| GGCCCACGAGGTTTGCTGGGTCCAAGGGGAACTCCAGGAGCTCCAGGGCAGCCT | GGTATG c.2040
| G P R G L L G P R G T P G A P G Q P | G M p.680
. . . | 23 . . g.111036
GCAGGTGTAGATGGCCCCCCAGGACCAAAAGGGAACATG | GGTCCCCAAGGGGAGCCTGGG c.2100
A G V D G P P G P K G N M | G P Q G E P G p.700
. . . | 24 . . . g.111554
CCTCCAGGTCAACAAGGGAATCCAGGACCTCAG | GGTCTTCCTGGTCCACAAGGTCCAATT c.2160
P P G Q Q G N P G P Q | G L P G P Q G P I p.720
. | 25 . . . . g.115175
GGTCCTCCTGGTGAAAAA | GGACCACAAGGAAAACCAGGACTTGCTGGACTTCCTGGTGCT c.2220
G P P G E K | G P Q G K P G L A G L P G A p.740
. | 26 . . . . | 27. g.117457
GATGGGCCTCCT | GGTCATCCTGGGAAAGAAGGCCAGTCTGGAGAAAAGGGGGCTCTG | GGT c.2280
D G P P | G H P G K E G Q S G E K G A L | G p.760
. . . . . | 28 . g.117597
CCCCCTGGTCCACAAGGTCCTATTGGATACCCGGGCCCCCGGGGAGTAAAG | GGAGCAGAT c.2340
P P G P Q G P I G Y P G P R G V K | G A D p.780
. . . | 29 . . . g.123949
GGTGTCAGAGGTCTCAAGGGATCTAAAGGTGAAAAG | GGTGAAGATGGTTTTCCAGGATTC c.2400
G V R G L K G S K G E K | G E D G F P G F p.800
. . . | 30 . . . g.125786
AAAGGTGACATGGGTCTAAAAGGTGACAGA | GGAGAAGTTGGTCAAATTGGCCCAAGAGGG c.2460
K G D M G L K G D R | G E V G Q I G P R G p.820
. . . . . . g.125846
GAAGATGGCCCTGAAGGACCCAAAGGTCGAGCAGGCCCAACTGGAGACCCAGGTCCTTCA c.2520
E D G P E G P K G R A G P T G D P G P S p.840
. | 31 . . . . g.129347
GGTCAAGCAGGAGAAAAG | GGAAAACTTGGAGTTCCAGGATTACCAGGATATCCAGGAAGA c.2580
G Q A G E K | G K L G V P G L P G Y P G R p.860
. | 32 . . . . . g.134109
CAAGGTCCAAAG | GGTTCCACTGGATTCCCTGGGTTTCCAGGTGCCAATGGAGAGAAAGGT c.2640
Q G P K | G S T G F P G F P G A N G E K G p.880
| 33 . . . . . | 34 . g.134592
GCACGG | GGAGTAGCTGGCAAACCAGGCCCTCGGGGTCAGCGTGGTCCAACG | GGTCCTCGA c.2700
A R | G V A G K P G P R G Q R G P T | G P R p.900
. . . . | 35 . . g.134759
GGTTCAAGAGGTGCAAGAGGTCCCACTGGGAAACCTGGGCCAAAG | GGCACTTCAGGTGGC c.2760
G S R G A R G P T G K P G P K | G T S G G p.920
. . . | 36 . . . g.138643
GATGGCCCTCCTGGCCCTCCAGGTGAAAGA | GGTCCTCAAGGACCTCAGGGTCCAGTTGGA c.2820
D G P P G P P G E R | G P Q G P Q G P V G p.940
. . | 37 . . . . g.143260
TTCCCTGGACCAAAAGGCCCTCCT | GGACCACCTGGGAAGGATGGGCTGCCAGGACACCCT c.2880
F P G P K G P P | G P P G K D G L P G H P p.960
. | 38 . . . . g.147998
GGGCAACGTGGGGAGACT | GGATTTCAAGGCAAGACCGGCCCTCCTGGGCCAGGGGGAGTG c.2940
G Q R G E T | G F Q G K T G P P G P G G V p.980
. | 39 . . . . . g.150784
GTTGGACCACAG | GGACCAACCGGTGAGACTGGTCCAATAGGGGAACGTGGGCATCCTGGC c.3000
V G P Q | G P T G E T G P I G E R G H P G p.1000
. . . . . . g.150844
CCTCCTGGCCCTCCTGGTGAGCAAGGTCTTCCTGGTGCTGCAGGAAAAGAAGGTGCAAAG c.3060
P P G P P G E Q G L P G A A G K E G A K p.1020
| 40 . . . . . . g.151291
| GGTGATCCAGGTCCTCAAGGTATCTCAGGGAAAGATGGACCAGCAGGATTACGTGGTTTC c.3120
| G D P G P Q G I S G K D G P A G L R G F p.1040
. . . | 41 . . . g.151607
CCAGGGGAAAGAGGTCTTCCTGGAGCTCAG | GGTGCACCTGGACTGAAAGGAGGGGAAGGT c.3180
P G E R G L P G A Q | G A P G L K G G E G p.1060
. . | 42 . . . . g.166576
CCCCAGGGCCCACCAGGTCCAGTT | GGCTCACCAGGAGAACGTGGGTCAGCAGGTACAGCT c.3240
P Q G P P G P V | G S P G E R G S A G T A p.1080
. . . . . . g.166636
GGCCCAATTGGTTTACCAGGGCGCCCGGGACCTCAGGGTCCTCCTGGTCCAGCTGGAGAG c.3300
G P I G L P G R P G P Q G P P G P A G E p.1100
. | 43 . . . . . g.173110
AAAGGTGCTCCT | GGAGAAAAAGGTCCCCAAGGGCCTGCAGGGAGAGATGGAGTTCAAGGT c.3360
K G A P | G E K G P Q G P A G R D G V Q G p.1120
. . . . . . g.173170
CCTGTTGGTCTCCCAGGGCCAGCTGGTCCTGCCGGCTCCCCTGGGGAAGACGGAGACAAG c.3420
P V G L P G P A G P A G S P G E D G D K p.1140
| 44 . . . . . | 45 . g.178389
| GGTGAAATTGGTGAGCCGGGACAAAAAGGCAGCAAGGGTGACAAGGGAGAAAAT | GGCCCT c.3480
| G E I G E P G Q K G S K G D K G E N | G P p.1160
. . . . | 46 . g.178952
CCCGGTCCCCCAGGTCTTCAAGGACCAGTTGGTGCCCCTGGAATTGCT | GGAGGTGATGGT c.3540
P G P P G L Q G P V G A P G I A | G G D G p.1180
. . . . . . g.179012
GAACCAGGTCCTAGAGGACAGCAGGGGATGTTTGGGCAAAAAGGTGATGAGGGTGCCAGA c.3600
E P G P R G Q Q G M F G Q K G D E G A R p.1200
. . . | 47 . . . g.190131
GGCTTCCCTGGACCTCCTGGTCCAATAGGTCTTCAG | GGTCTGCCAGGCCCACCTGGTGAA c.3660
G F P G P P G P I G L Q | G L P G P P G E p.1220
. . . | 48 . . . g.191955
AAAGGTGAAAATGGGGATGTTGGTCCCATG | GGGCCACCTGGTCCTCCAGGCCCAAGAGGC c.3720
K G E N G D V G P M | G P P G P P G P R G p.1240
. . | 49 . . . . g.193168
CCTCAAGGTCCCAATGGAGCTGAT | GGACCACAAGGACCCCCAGGGTCTGTTGGTTCAGTT c.3780
P Q G P N G A D | G P Q G P P G S V G S V p.1260
. | 50 . . . . g.197854
GGTGGTGTTGGAGAAAAG | GGTGAACCTGGAGAAGCAGGGAACCCAGGGCCTCCTGGGGAA c.3840
G G V G E K | G E P G E A G N P G P P G E p.1280
. | 51 . . . . . g.198733
GCAGGTGTAGGC | GGTCCCAAAGGAGAAAGAGGAGAGAAAGGGGAAGCTGGTCCACCTGGA c.3900
A G V G | G P K G E R G E K G E A G P P G p.1300
. . . . . . g.198793
GCTGCTGGACCTCCAGGTGCCAAGGGGCCACCAGGTGATGATGGCCCTAAGGGTAACCCG c.3960
A A G P P G A K G P P G D D G P K G N P p.1320
| 52 . . . . . | 53 . g.199812
| GGTCCTGTTGGTTTTCCTGGAGATCCTGGTCCTCCTGGGGAACCTGGCCCTGCA | GGTCAA c.4020
| G P V G F P G D P G P P G E P G P A | G Q p.1340
. . . . | 54 . g.201296
GATGGTGTTGGTGGTGACAAGGGTGAAGATGGAGATCCTGGTCAACCG | GGTCCTCCTGGC c.4080
D G V G G D K G E D G D P G Q P | G P P G p.1360
. . . . | 55 . . g.214520
CCATCTGGTGAGGCTGGCCCACCAGGTCCTCCTGGAAAACGA | GGTCCTCCTGGAGCTGCA c.4140
P S G E A G P P G P P G K R | G P P G A A p.1380
. . . | 56 . . . g.214747
GGTGCAGAGGGAAGACAAGGTGAAAAAGGTGCTAAG | GGGGAAGCAGGTGCAGAAGGTCCT c.4200
G A E G R Q G E K G A K | G E A G A E G P p.1400
. . . . . . g.214807
CCTGGAAAAACCGGCCCAGTCGGTCCTCAGGGACCTGCAGGAAAGCCTGGTCCAGAAGGT c.4260
P G K T G P V G P Q G P A G K P G P E G p.1420
. . | 57 . . . . g.215354
CTTCGGGGCATCCCTGGTCCTGTG | GGAGAACAAGGTCTCCCTGGAGCTGCAGGCCAAGAT c.4320
L R G I P G P V | G E Q G L P G A A G Q D p.1440
. | 58 . . . . g.223034
GGACCACCTGGTCCTATG | GGACCTCCTGGCTTACCTGGTCTCAAAGGTGACCCTGGCTCC c.4380
G P P G P M | G P P G L P G L K G D P G S p.1460
. | 59 . . . . . g.223982
AAGGGTGAAAAG | GGACATCCTGGTTTAATTGGCCTGATTGGTCCTCCAGGAGAACAAGGG c.4440
K G E K | G H P G L I G L I G P P G E Q G p.1480
. . . . . . g.224042
GAAAAAGGTGACCGAGGGCTCCCTGGAACTCAAGGATCTCCAGGAGCAAAAGGGGATGGG c.4500
E K G D R G L P G T Q G S P G A K G D G p.1500
| 60 . . . . . | 61 . g.224744
| GGAATTCCTGGTCCTGCTGGTCCCTTAGGTCCACCTGGTCCTCCAGGTTTACCA | GGTCCT c.4560
| G I P G P A G P L G P P G P P G L P | G P p.1520
. . . | 62 . . . g.224896
CAAGGCCCAAAGGGTAACAAAGGCTCTACT | GGACCCGCTGGCCAGAAAGGTGACAGTGGT c.4620
Q G P K G N K G S T | G P A G Q K G D S G p.1540
. . | 63 . . . . g.226476
CTTCCAGGGCCTCCTGGGTCTCCA | GGTCCACCTGGTGAAGTCATTCAGCCTTTACCAATC c.4680
L P G P P G S P | G P P G E V I Q P L P I p.1560
. . . . . . g.226536
TTGTCCTCCAAAAAAACGAGAAGACATACTGAAGGCATGCAAGCAGATGCAGATGATAAT c.4740
L S S K K T R R H T E G M Q A D A D D N p.1580
. . . . . . g.226596
ATTCTTGATTACTCGGATGGAATGGAAGAAATATTTGGTTCCCTCAATTCCCTGAAACAA c.4800
I L D Y S D G M E E I F G S L N S L K Q p.1600
. . . . . . g.226656
GACATTGAGCATATGAAATTTCCAATGGGTACTCAGACCAATCCAGCCCGAACTTGTAAA c.4860
D I E H M K F P M G T Q T N P A R T C K p.1620
. . . | 64 . . . g.230211
GACCTGCAACTCAGCCATCCTGACTTCCCAGATG | GTGAATATTGGATTGATCCTAACCAA c.4920
D L Q L S H P D F P D G | E Y W I D P N Q p.1640
. . . . . . g.230271
GGTTGCTCAGGAGATTCCTTCAAAGTTTACTGTAATTTCACATCTGGTGGTGAGACTTGC c.4980
G C S G D S F K V Y C N F T S G G E T C p.1660
. . | 65. . . . g.231764
ATTTATCCAGACAAAAAATCTGAGGGA | GTAAGAATTTCATCATGGCCAAAGGAGAAACCA c.5040
I Y P D K K S E G | V R I S S W P K E K P p.1680
. . . | 66 . . . g.233604
GGAAGTTGGTTTAGTGAATTTAAGAGGGGAAAACTG | CTTTCATACTTAGATGTTGAAGGA c.5100
G S W F S E F K R G K L | L S Y L D V E G p.1700
. . . . . . g.233664
AATTCCATCAATATGGTGCAAATGACATTCCTGAAACTTCTGACTGCCTCTGCTCGGCAA c.5160
N S I N M V Q M T F L K L L T A S A R Q p.1720
. . . . . . g.233724
AATTTCACCTACCACTGTCATCAGTCAGCAGCCTGGTATGATGTGTCATCAGGAAGTTAT c.5220
N F T Y H C H Q S A A W Y D V S S G S Y p.1740
. . . . . . g.233784
GACAAAGCACTTCGCTTCCTGGGATCAAATGATGAGGAGATGTCCTATGACAATAATCCT c.5280
D K A L R F L G S N D E E M S Y D N N P p.1760
. . . | 67 . . . g.235361
TTTATCAAAACACTGTATGATGGTTGTGCG | TCCAGAAAAGGCTATGAAAAGACTGTCATT c.5340
F I K T L Y D G C A | S R K G Y E K T V I p.1780
. . . . . . g.235421
GAAATCAATACACCAAAAATTGATCAAGTACCTATTGTTGATGTCATGATCAATGACTTT c.5400
E I N T P K I D Q V P I V D V M I N D F p.1800
. . . . . g.235478
GGTGATCAGAATCAGAAGTTCGGATTTGAAGTTGGTCCTGTTTGTTTTCTTGGCTAA c.5457
G D Q N Q K F G F E V G P V C F L G X p.1818
. . . . . . g.235538
gattaagacaaagaacatatcaaatcaacagaaaatataccttggtgccaccaacccatt c.*60
. . . . . . g.235598
ttgtgccacatgcaagttttgaataaggatggtatagaaaacaacgctgcatatacaggt c.*120
. . . . . . g.235658
accatttaggaaataccgatgcctttgtgggggcagaatcacatggcaaaagctttgaaa c.*180
. . . . . . g.235718
atcataaagatataagttggtgtggctaagatggaaacagggctgattcttgattcccaa c.*240
. . . . . . g.235778
ttctcaactctccttttcctatttgaatttctttggtgctgtagaaaacaaaaaaagaaa c.*300
. . . . . . g.235838
aatatatattcataaaaaatatggtgctcattctcatccatccaggatgtactaaaacag c.*360
. . . . . . g.235898
tgtgtttaataaattgtaattattttgtgtacagttctatactgttatctgtgtccattt c.*420
. . . . . . g.235958
ccaaaacttgcacgtgtccctgaattccatctgactctaattttatgagaattgcagaac c.*480
. . . . . . g.236018
tctgatggcaataaatatatgtattatgaaaaaataaagttgtaatttctgatgactcta c.*540
. . . . . . g.236078
agtccctttctttggttaataataaaatgcctttgtatatattgatgttgaagagttcaa c.*600
. . . . . . g.236138
ttatttgatgtcgccaacaaaattctcagagggcaaaaatctggaagacttttggaagca c.*660
. . . . . . g.236198
cactctgatcaactcttctctgccgacagtcattttgctgaatttcagccaaaaatatta c.*720
. . . . . . g.236258
tgcattttgatgctttattcaaggctatacctcaaactttttcttctcagaatccaggat c.*780
. . . . . . g.236318
ttcacaggatacttgtatatatggaaaacaagcaagtttatatttttggacagggaaatg c.*840
. . . . . . g.236378
tgtgtaagaaagtatattaacaaatcaatgcctccgtcaagcaaacaatcatatgtatac c.*900
. . . . . . g.236438
tttttttctacgttatctcatctccttgttttcagtgtgcttcaataatgcaggttaata c.*960
. . . . . . g.236498
ttaaagatggaaattaagcaattatttatgaatttgtgcaatgttagattttcttatcaa c.*1020
. . . . . . g.236558
tcaagttcttgaatttgattctaagttgcatattataacagtctcgaaaattattttact c.*1080
. . . . . . g.236618
tgcccaacaaatattacttttttcctttcaagataattttataaatcatttgacctacct c.*1140
. . . . . . g.236678
aattgctaaatgaataacatatggtggactgttattaagagtatttgttttaagtcattc c.*1200
. . . . . . g.236738
aggaaaatctaaacttttttttccactaaggtatttactttaaggtagcttgaaatagca c.*1260
. . . . . . g.236798
atacaatttaaaaattaaaaactgaattttgtatctattttaagtaatatatgtaagact c.*1320
. . . . . . g.236858
tgaaaataaatgttttatttcttatataaagtgttaaattaattgataccagatttcact c.*1380
. . . . . . g.236918
ggaacagtttcaactgataatttatgacaaaagaacatacctgtaatattgaaattaaaa c.*1440
. . . . . . g.236978
agtgaaatttgtcataaagaatttcttttatttttgaaatcgagtttgtaaatgtccttt c.*1500
. . . . . g.237030
taagaagggagatatgaatccaataaataaactcaagtcttggctacctgga c.*1552
(downstream sequence)
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