(used for variant description)
(last modified June 3, 2014)
This file was created to facilitate the description of sequence variants on transcript NM_001039590.2 in the USP9X gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NC_000023.10, covering USP9X transcript NM_001039590.2.
(upstream sequence)
. . . g.5033
gcggccgccttagcgcccggtgcttgggtcggc c.-601
. . . . . . g.5093
gccgggagcgaggagcgagctacttcaaagccaccaggcctggagcggggacagaggcgg c.-541
. . . . . . g.5153
cgactaggggaaggtgaagccgtcgctgcaggaggaggagcaggaggaggtgacgcagga c.-481
. . . . . . g.5213
gaaacgcaccgcccggagcccgtctgagctcagcgagagccccagcctgaggggagaagg c.-421
. . . . . . g.5273
ggaagagggccgtcgccggccaaggaggaggaggaggcgggcgcggcgaggagcgagttc c.-361
. . . . . . g.5333
cggcgccggtgtgcagccttttggttgagacgcccgcagccccgagcccggccgccgcag c.-301
. . . . . . g.5393
cctttcgatacactttgttgccggtcacccccgggcctgggatgcacccagggtaggtct c.-241
. . . . . . g.5453
cgtcccgggaccgagccccaccgtcgcctggtgcctcccgcctccgtgtgccctggttgt c.-181
. . . | 02 . . . g.42874
gagaagacgtctgtgtcgtgcg | gttatgcaatggtctctgcaagatggtttattcttgaa c.-121
. . . . . . g.42934
ttggacctttttaagactgacaaatgctggtacttcatcttctataagtggactataatt c.-61
. . . . . . g.42994
tcttttctcaagacaactacataagcagacaaaattgcaaagatctgccctgtgtcgagt c.-1
. . . . . . g.43054
ATGACAGCCACGACTCGTGGCTCTCCGGTCGGAGGGAATGACAACCAGGGCCAGGCTCCT c.60
M T A T T R G S P V G G N D N Q G Q A P p.20
. . . | 03 . . . g.48389
GATGGACAGTCTCAGCCCCCCCTCCAACAGAATCAG | ACTTCATCGCCTGATTCTTCCAAT c.120
D G Q S Q P P L Q Q N Q | T S S P D S S N p.40
. . . . . . g.48449
GAAAATTCCCCGGCAACTCCCCCAGATGAGCAAGGTCAAGGTGATGCCCCACCACAGCTT c.180
E N S P A T P P D E Q G Q G D A P P Q L p.60
. . . . . . g.48509
GAAGATGAGGAACCTGCATTTCCACATACTGACTTGGCCAAGTTGGATGACATGATCAAC c.240
E D E E P A F P H T D L A K L D D M I N p.80
| 04 . . . . . . g.50880
AG | GCCTCGATGGGTGGTTCCAGTTTTGCCGAAAGGGGAATTAGAAGTGCTTTTAGAAGCT c.300
R | P R W V V P V L P K G E L E V L L E A p.100
. . | 05 . . . . g.54128
GCTATTGATCTTAGTAAAAAGG | GCCTTGATGTTAAAAGTGAAGCATGTCAGCGATTTTTC c.360
A I D L S K K G | L D V K S E A C Q R F F p.120
. . . . . . g.54188
CGTGATGGGCTAACAATATCATTCACTAAAATTCTTACAGATGAAGCAGTGAGTGGCTGG c.420
R D G L T I S F T K I L T D E A V S G W p.140
. | 06 . . . . . g.56214
AAGTTTGAAATTCAT | AGGTGTATTATTAACAATACTCATCGTCTGGTGGAGCTATGTGTG c.480
K F E I H | R C I I N N T H R L V E L C V p.160
. . . . . . g.56274
GCCAAGTTGTCCCAAGACTGGTTTCCACTTTTAGAACTTCTTGCCATGGCCTTAAATCCT c.540
A K L S Q D W F P L L E L L A M A L N P p.180
. . . . . . g.56334
CATTGCAAATTCCATATCTACAATGGTACACGTCCATGTGAATCAGTTTCCTCAAGTGTT c.600
H C K F H I Y N G T R P C E S V S S S V p.200
. . . . . | 07 . g.60027
CAGTTGCCTGAAGATGAACTCTTTGCTCGTTCTCCAGATCCTCGATCACCAAAG | GGTTGG c.660
Q L P E D E L F A R S P D P R S P K | G W p.220
. . . . . . g.60087
CTAGTGGATCTTCTCAACAAATTTGGCACTTTAAATGGGTTCCAGATTTTGCATGATCGT c.720
L V D L L N K F G T L N G F Q I L H D R p.240
. . . . . | 08 . g.60341
TTTATTAATGGATCAGCATTAAACGTTCAAATAATTGCAGCCCTTATTAA | ACCATTTGGG c.780
F I N G S A L N V Q I I A A L I K | P F G p.260
. . . . . . g.60401
CAATGCTATGAGTTTCTCACTCTTCATACAGTGAAAAAGTACTTTCTTCCAATAATAGAA c.840
Q C Y E F L T L H T V K K Y F L P I I E p.280
. . . . . . g.60461
ATGGTTCCACAGTTTTTAGAAAACTTAACTGATGAAGAACTGAAAAAAGAAGCAAAGAAT c.900
M V P Q F L E N L T D E E L K K E A K N p.300
. . . . . . g.60521
GAAGCCAAAAATGATGCTCTTTCAATGATTATTAAATCTTTGAAGAATTTAGCTTCAAGG c.960
E A K N D A L S M I I K S L K N L A S R p.320
. . . . . . g.60581
GTTCCAGGACAAGAAGAAACTGTTAAAAACTTAGAAATATTTAGGTTAAAAATGATACTT c.1020
V P G Q E E T V K N L E I F R L K M I L p.340
| 09 . . . . . . g.60716
AG | ATTATTGCAAATTTCTTCTTTCAATGGAAAGATGAATGCACTGAATGAAGTTAATAAG c.1080
R | L L Q I S S F N G K M N A L N E V N K p.360
. . . . . . g.60776
GTGATATCTAGTGTATCATACTATACTCATCGACATGGTAATCCTGAGGAGGAAGAGTGG c.1140
V I S S V S Y Y T H R H G N P E E E E W p.380
. . | 10 . . . . g.62695
CTCACAGCTGAACGAATGGCA | GAATGGATACAGCAGAACAATATCTTATCCATAGTGTTG c.1200
L T A E R M A | E W I Q Q N N I L S I V L p.400
. . . . . . g.62755
CGAGATAGTCTTCATCAGCCACAGTATGTAGAAAAGTTAGAGAAGATTCTTCGTTTTGTC c.1260
R D S L H Q P Q Y V E K L E K I L R F V p.420
. . . . . | 11 . g.63893
ATCAAAGAAAAAGCTCTGACCTTACAGGATCTTGATAATATCTGGGCAGCACAG | GCAGGG c.1320
I K E K A L T L Q D L D N I W A A Q | A G p.440
. . . . . . g.63953
AAACATGAAGCCATTGTGAAGAATGTACATGATCTCCTGGCAAAATTGGCATGGGATTTT c.1380
K H E A I V K N V H D L L A K L A W D F p.460
. . . | 12 . . g.67755
TCTCCTGAACAACTTGATCATCTTTTTGATTGTTTTAAG | GCCAGTTGGACAAATGCGAGT c.1440
S P E Q L D H L F D C F K | A S W T N A S p.480
. . . . . . g.67815
AAAAAGCAACGTGAAAAGCTACTTGAGCTGATACGTCGTCTTGCAGAAGATGATAAAGAT c.1500
K K Q R E K L L E L I R R L A E D D K D p.500
. . . . . . g.67875
GGTGTGATGGCACACAAAGTGTTGAACCTTCTGTGGAATCTGGCTCACAGTGATGATGTG c.1560
G V M A H K V L N L L W N L A H S D D V p.520
. . . . . . g.67935
CCTGTAGATATCATGGACCTGGCTCTCAGTGCCCACATAAAAATACTAGATTACAGTTGC c.1620
P V D I M D L A L S A H I K I L D Y S C p.540
| 13 . . . . . . g.70340
TCCCAG | GACCGTGATACACAAAAGATCCAATGGATAGATCGCTTTATAGAAGAACTTCGC c.1680
S Q | D R D T Q K I Q W I D R F I E E L R p.560
. . . . . . g.70400
ACAAATGACAAATGGGTTATTCCCGCACTGAAACAAATTAGAGAAATTTGTAGTTTGTTT c.1740
T N D K W V I P A L K Q I R E I C S L F p.580
. . | 14 . . . . g.72350
GGTGAAGCGCCTCAAAATTTGAG | TCAAACTCAGCGAAGTCCCCATGTGTTTTATCGCCAT c.1800
G E A P Q N L S | Q T Q R S P H V F Y R H p.600
. . . . . . g.72410
GACTTAATCAATCAACTTCAACACAATCATGCCCTAGTTACTTTGGTAGCAGAAAACCTT c.1860
D L I N Q L Q H N H A L V T L V A E N L p.620
. . . | 15. . . g.82178
GCAACTTACATGGAAAGCATGAGACTATATGCTAGAG | ACCATGAAGATTATGACCCACAA c.1920
A T Y M E S M R L Y A R D | H E D Y D P Q p.640
. . . . . . g.82238
ACTGTGAGGCTGGGAAGTAGATATAGTCATGTTCAAGAAGTTCAAGAACGGCTTAACTTC c.1980
T V R L G S R Y S H V Q E V Q E R L N F p.660
| 16 . . . . . . g.85292
CTTAG | ATTTTTATTGAAGGATGGTCAGCTGTGGCTATGTGCTCCTCAGGCAAAACAAATA c.2040
L R | F L L K D G Q L W L C A P Q A K Q I p.680
. . . . . . g.85352
TGGAAATGCTTAGCTGAGAATGCAGTTTACCTTTGTGATCGTGAAGCCTGTTTTAAGTGG c.2100
W K C L A E N A V Y L C D R E A C F K W p.700
. . . . . . g.85412
TATTCCAAGTTGATGGGGGATGAACCAGACTTAGATCCTGATATTAATAAGGACTTCTTT c.2160
Y S K L M G D E P D L D P D I N K D F F p.720
. . . . . . g.85472
GAAAGTAATGTGCTTCAGCTTGATCCTTCTCTGTTAACTGAAAATGGAATGAAGTGTTTT c.2220
E S N V L Q L D P S L L T E N G M K C F p.740
. . . . . . g.85532
GAGCGATTCTTCAAAGCTGTGAATTGTCGAGAAGGAAAACTAGTAGCAAAAAGGAGAGCC c.2280
E R F F K A V N C R E G K L V A K R R A p.760
. . . . | 17 . g.86859
TATATGATGGATGACTTGGAGTTAATAGGATTAGATTACCTTTGGAGG | GTCGTGATTCAG c.2340
Y M M D D L E L I G L D Y L W R | V V I Q p.780
. . . . . . g.86919
AGTAATGATGATATTGCCAGCAGAGCTATAGATCTCCTCAAAGAGATATACACGAACCTT c.2400
S N D D I A S R A I D L L K E I Y T N L p.800
. . | 18 . . . . g.87408
GGTCCAAGACTACAAGTCAATCAG | GTGGTGATCCATGAAGACTTCATTCAGTCTTGTTTT c.2460
G P R L Q V N Q | V V I H E D F I Q S C F p.820
. . . . . . g.87468
GATCGTCTGAAGGCTTCCTATGACACATTGTGTGTTTTGGATGGTGACAAAGACAGTGTT c.2520
D R L K A S Y D T L C V L D G D K D S V p.840
. . . . . . g.87528
AATTGTGCAAGACAGGAAGCTGTTCGAATGGTTCGAGTATTAACTGTTTTAAGGGAATAT c.2580
N C A R Q E A V R M V R V L T V L R E Y p.860
. . . . . | 19 . g.89364
ATAAATGAATGTGACAGTGATTATCATGAGGAAAGAACAATTCTCCCTATGTCGAG | AGCA c.2640
I N E C D S D Y H E E R T I L P M S R | A p.880
. . . . . . g.89424
TTCCGCGGTAAACACCTCTCTTTTGTAGTTCGATTTCCAAACCAGGGCAGACAGGTTGAT c.2700
F R G K H L S F V V R F P N Q G R Q V D p.900
. . . . . . g.89484
GACTTGGAGGTATGGTCTCATACAAATGATACAATTGGTTCAGTACGACGATGTATTCTC c.2760
D L E V W S H T N D T I G S V R R C I L p.920
. . . . . . g.89544
AATCGTATTAAAGCCAACGTAGCCCATACAAAAATTGAGCTCTTTGTGGGCGGTGAGCTG c.2820
N R I K A N V A H T K I E L F V G G E L p.940
. . . . . | 20. g.89838
ATAGATCCTGCAGATGATAGAAAGTTGATTGGACAATTAAACTTAAAAGATAAATCG | CTT c.2880
I D P A D D R K L I G Q L N L K D K S | L p.960
. . . . . . g.89898
ATTACAGCCAAACTTACACAGATAAGTTCCAATATGCCTTCAAGCCCTGATAGCTCTTCT c.2940
I T A K L T Q I S S N M P S S P D S S S p.980
. . . . . . g.89958
GATTCCTCCACTGGATCTCCTGGAAACCATGGTAATCATTACAGTGATGGTCCCAATCCA c.3000
D S S T G S P G N H G N H Y S D G P N P p.1000
. . | 21. . . . g.91236
GAAGTGGAAAGCTGTTTGCCTGGAGTG | ATAATGTCACTGCATCCCAGATACATCTCTTTT c.3060
E V E S C L P G V | I M S L H P R Y I S F p.1020
. . . . . . g.91296
CTTTGGCAAGTTGCAGACTTAGGTAGCAGCCTAAATATGCCACCCCTTAGAGATGGAGCA c.3120
L W Q V A D L G S S L N M P P L R D G A p.1040
. . | 22 . . . g.103395
AGAGTACTTATGAAACTTATGCCGCCAG | ATAGCACAACGATAGAAAAATTAAGAGCTATT c.3180
R V L M K L M P P D | S T T I E K L R A I p.1060
. . . . . . g.103455
TGTTTAGACCATGCCAAACTTGGAGAAAGCAGCCTTAGTCCATCTCTTGACTCACTTTTC c.3240
C L D H A K L G E S S L S P S L D S L F p.1080
. . . | 23 . . g.103783
TTTGGTCCTTCAGCCTCACAAGTGCTATATCTAACAGAG | GTAGTCTATGCCTTGTTAATG c.3300
F G P S A S Q V L Y L T E | V V Y A L L M p.1100
. . . . . . g.103843
CCTGCTGGTGCACCTCTGGCTGATGATTCCTCTGATTTTCAGTTTCACTTCTTGAAAAGT c.3360
P A G A P L A D D S S D F Q F H F L K S p.1120
. . . . . . g.103903
GGTGGCCTACCCCTTGTACTGAGTATGCTAACCAGAAATAACTTCCTACCGAATGCAGAT c.3420
G G L P L V L S M L T R N N F L P N A D p.1140
. . . . . . g.103963
ATGGAAACTCGAAGGGGTGCCTACCTCAATGCTCTTAAAATAGCCAAGCTTTTGCTAACT c.3480
M E T R R G A Y L N A L K I A K L L L T p.1160
. . . . . . g.104023
GCCATTGGCTATGGTCATGTTCGAGCTGTGGCAGAAGCTTGTCAGCCAGGTGTAGAAGGT c.3540
A I G Y G H V R A V A E A C Q P G V E G p.1180
. | 24 . . . . g.105924
GTGAATCCCATGACACAG | ATCAACCAAGTTACCCATGATCAAGCAGTGGTGCTACAAAGT c.3600
V N P M T Q | I N Q V T H D Q A V V L Q S p.1200
. . . . . . g.105984
GCCCTTCAGAGCATTCCTAATCCATCATCCGAGTGCATGCTTAGAAATGTGTCAGTTCGT c.3660
A L Q S I P N P S S E C M L R N V S V R p.1220
. . | 25 . . . . g.107393
CTTGCTCAGCAGATATCTGATGAG | GCTTCAAGATATATGCCTGATATTTGTGTAATTAGA c.3720
L A Q Q I S D E | A S R Y M P D I C V I R p.1240
. . . . . . g.107453
GCTATACAAAAAATTATCTGGGCATCAGGATGTGGGTCGTTACAGCTAGTATTTAGCCCA c.3780
A I Q K I I W A S G C G S L Q L V F S P p.1260
. . . | 26 . . . g.108704
AATGAAGAAATCACTAAAATTTATGAGAAG | ACCAATGCAGGCAATGAGCCAGACTTGGAA c.3840
N E E I T K I Y E K | T N A G N E P D L E p.1280
. . . . . . g.108764
GACGAACAGGTTTGCTGTGAAGCATTGGAAGTGATGACCTTATGTTTTGCCTTGATTCCA c.3900
D E Q V C C E A L E V M T L C F A L I P p.1300
. . . . . . g.108824
ACAGCCTTAGATGCTCTTAGTAAAGAAAAGGCTTGGCAGACATTCATCATTGACTTACTA c.3960
T A L D A L S K E K A W Q T F I I D L L p.1320
. | 27. . . . . g.115659
TTGCACTGTCACAGCAA | AACTGTTCGTCAGGTGGCACAGGAGCAGTTCTTTTTAATGTGC c.4020
L H C H S K | T V R Q V A Q E Q F F L M C p.1340
. . . . . . g.115719
ACCAGATGTTGCATGGGACACCGGCCTCTACTTTTCTTCATTACTCTACTCTTTACTGTT c.4080
T R C C M G H R P L L F F I T L L F T V p.1360
| 28 . . . . . . g.116011
TTGGGG | AGCACAGCAAGAGAGAGAGCTAAACACTCAGGCGACTACTTTACTCTTTTAAGA c.4140
L G | S T A R E R A K H S G D Y F T L L R p.1380
. . . . . . g.116071
CACCTTCTTAATTACGCTTACAATAGTAATATTAATGTACCCAATGCTGAAGTTCTTCTC c.4200
H L L N Y A Y N S N I N V P N A E V L L p.1400
. . . | 29 . . . g.116756
AATAATGAAATTGATTGGCTTAAAAGAATTAGG | GATGATGTTAAAAGAACAGGAGAAACG c.4260
N N E I D W L K R I R | D D V K R T G E T p.1420
. . . . . . g.116816
GGTATTGAAGAGACGATCTTAGAGGGCCACCTTGGAGTGACAAAGGAGTTACTGGCCTTT c.4320
G I E E T I L E G H L G V T K E L L A F p.1440
. . . . . . g.116876
CAAACTTCTGAGAAAAAATTTCATATTGGTTGTGAAAAAGGAGGTGCTAATCTCATTAAA c.4380
Q T S E K K F H I G C E K G G A N L I K p.1460
| 30 . . . . . . g.117953
| GAATTAATTGATGATTTCATATTTCCTGCATCCAATGTTTACCTACAGTATATGAGAAAT c.4440
| E L I D D F I F P A S N V Y L Q Y M R N p.1480
. . . . . . g.118013
GGAGAGCTTCCAGCTGAACAGGCTATTCCGGTCTGTGGTTCACCACCTACAATTAATGCT c.4500
G E L P A E Q A I P V C G S P P T I N A p.1500
. . . . . . g.118073
GGTTTTGAATTACTTGTAGCATTAGCTGTTGGCTGTGTGAGGAATCTCAAACAAATAGTA c.4560
G F E L L V A L A V G C V R N L K Q I V p.1520
. . . . | 31 . . g.120442
GATTCTTTGACTGAAATGTATTACATTGGCACAGCAATAACTA | CTTGTGAAGCACTTACT c.4620
D S L T E M Y Y I G T A I T T | C E A L T p.1540
. . . . . . g.120502
GAGTGGGAATATCTGCCACCTGTTGGACCCCGCCCACCCAAAGGATTCGTGGGGCTGAAA c.4680
E W E Y L P P V G P R P P K G F V G L K p.1560
. . . . . . g.120562
AATGCCGGTGCTACTTGTTACATGAATTCTGTGATTCAGCAACTCTACATGATTCCTTCC c.4740
N A G A T C Y M N S V I Q Q L Y M I P S p.1580
. . . . . . g.120622
ATTAGGAACGGTATTCTTGCCATTGAAGGCACAGGTAGTGATGTAGATGATGATATGTCT c.4800
I R N G I L A I E G T G S D V D D D M S p.1600
. . | 32 . . . . g.124704
GGGGATGAGAAGCAGGACAATGAG | AGCAATGTTGATCCCAGGGATGATGTATTTGGATAT c.4860
G D E K Q D N E | S N V D P R D D V F G Y p.1620
. . . . . . g.124764
CCTCAACAATTTGAAGATAAACCAGCATTAAGTAAAACTGAAGATAGAAAAGAGTACAAC c.4920
P Q Q F E D K P A L S K T E D R K E Y N p.1640
. . . . . . g.124824
ATTGGTGTCCTAAGACACCTTCAGGTCATCTTTGGTCATTTAGCTGCTTCTCGACTGCAA c.4980
I G V L R H L Q V I F G H L A A S R L Q p.1660
. . . | 33 . . . g.129899
TACTATGTGCCCAGAGGATTTTGGAAACAGTTCAG | GCTTTGGGGTGAGCCTGTTAATCTG c.5040
Y Y V P R G F W K Q F R | L W G E P V N L p.1680
. . . . . . g.129959
CGTGAACAACACGATGCTTTAGAATTTTTTAATTCATTGGTGGATAGTTTAGATGAAGCT c.5100
R E Q H D A L E F F N S L V D S L D E A p.1700
. . . . . . g.130019
TTAAAAGCTTTAGGACATCCAGCTATGCTAAGTAAAGTCTTAGGAGGTTCCTTTGCTGAT c.5160
L K A L G H P A M L S K V L G G S F A D p.1720
. . | 34 . . . g.133964
CAGAAGATCTGCCAAGGCTGCCCACATAG | GTACGAATGTGAAGAATCTTTTACGACCCTA c.5220
Q K I C Q G C P H R | Y E C E E S F T T L p.1740
. . . . . . g.134024
AACGTAGACATTAGAAATCACCAAAATCTTCTTGATTCTTTGGAACAGTATGTCAAAGGA c.5280
N V D I R N H Q N L L D S L E Q Y V K G p.1760
. . . . . | 35 . g.135273
GATTTACTAGAAGGTGCAAATGCATATCATTGTGAAAAATGCAATAAAAAG | GTTGATACC c.5340
D L L E G A N A Y H C E K C N K K | V D T p.1780
. . . . . . g.135333
GTAAAGCGCTTGCTGATTAAAAAATTACCTCCTGTTCTTGCTATACAACTAAAGCGATTT c.5400
V K R L L I K K L P P V L A I Q L K R F p.1800
. . . . . . g.135393
GACTATGACTGGGAAAGAGAATGTGCAATCAAGTTCAATGATTATTTTGAATTTCCTCGA c.5460
D Y D W E R E C A I K F N D Y F E F P R p.1820
. . . . . . g.135453
GAGCTGGACATGGAACCTTACACAGTTGCAGGTGTCGCAAAGCTGGAAGGGGATAATGTA c.5520
E L D M E P Y T V A G V A K L E G D N V p.1840
. . . . . . g.135513
AACCCAGAGAGTCAGTTGATACAACAGAGTGAGCAGTCTGAAAGTGAGACAGCAGGAAGC c.5580
N P E S Q L I Q Q S E Q S E S E T A G S p.1860
. . . . . . g.135573
ACAAAATACAGACTTGTGGGTGTGCTCGTACACAGTGGTCAAGCGAGTGGGGGGCATTAT c.5640
T K Y R L V G V L V H S G Q A S G G H Y p.1880
. . . . . . g.135633
TATTCTTACATCATCCAAAGGAATGGTGGAGATGGTGAGAGAAATCGCTGGTATAAATTT c.5700
Y S Y I I Q R N G G D G E R N R W Y K F p.1900
. . . . . . g.135693
GATGATGGTGATGTAACAGAATGTAAAATGGATGATGACGAAGAAATGAAAAACCAGTGT c.5760
D D G D V T E C K M D D D E E M K N Q C p.1920
. . . . . . g.135753
TTTGGTGGAGAGTACATGGGAGAAGTGTTTGATCACATGATGAAGCGTATGTCATACAGG c.5820
F G G E Y M G E V F D H M M K R M S Y R p.1940
. . . . . . g.135813
CGCCAGAAAAGGTGGTGGAATGCTTATATACTTTTTTATGAACGAATGGACACAATAGAC c.5880
R Q K R W W N A Y I L F Y E R M D T I D p.1960
. . . . . . g.135873
CAAGATGATGAGTTGATAAGATATATATCAGAGCTTGCTATCACCACCAGACCTCATCAG c.5940
Q D D E L I R Y I S E L A I T T R P H Q p.1980
. . . . . . g.135933
ATTATTATGCCATCAGCCATTGAGAGAAGTGTACGGAAACAGAACGTACAATTCATGCAT c.6000
I I M P S A I E R S V R K Q N V Q F M H p.2000
. . . . . . g.135993
AACCGAATGCAGTACAGTATGGAGTATTTTCAGTTTATGAAAAAACTGCTTACATGTAAT c.6060
N R M Q Y S M E Y F Q F M K K L L T C N p.2020
. . | 36 . . . . g.136620
GGCGTTTACTTAAACCCTCCTCCCG | GGCAAGATCACCTGTTGCCTGAAGCAGAAGAAATC c.6120
G V Y L N P P P G | Q D H L L P E A E E I p.2040
. . . . . . g.136680
ACTATGATCAGTATTCAACTTGCTGCTAGGTTCCTCTTTACTACAGGATTTCACACAAAG c.6180
T M I S I Q L A A R F L F T T G F H T K p.2060
. . | 37 . . . g.137768
AAAGTAGTCCGTGGCTCTGCCAGTGATTG | GTATGATGCATTGTGTATTCTCCTTCGTCAC c.6240
K V V R G S A S D W | Y D A L C I L L R H p.2080
. . . . . . g.137828
AGCAAGAATGTACGTTTTTGGTTTGCTCATAACGTCCTTTTTAATGTTTCAAATCGCTTC c.6300
S K N V R F W F A H N V L F N V S N R F p.2100
. . . . . . g.137888
TCCGAATACCTTCTGGAGTGCCCTAGTGCAGAAGTGAGGGGTGCGTTTGCAAAACTTATA c.6360
S E Y L L E C P S A E V R G A F A K L I p.2120
. . . . . . g.137948
GTCTTTATTGCACATTTTTCCTTGCAAGATGGGCCATGTCCTTCACCTTTTGCCTCTCCT c.6420
V F I A H F S L Q D G P C P S P F A S P p.2140
. | 38 . . . . . g.138512
GGACCTTCTAGTCAG | GCTTATGACAACTTAAGCTTGAGTGATCACTTACTAAGAGCAGTA c.6480
G P S S Q | A Y D N L S L S D H L L R A V p.2160
. . . . . . g.138572
CTAAATCTCTTGAGAAGGGAAGTTTCAGAGCATGGGCGTCATTTACAGCAGTATTTCAAC c.6540
L N L L R R E V S E H G R H L Q Q Y F N p.2180
. . | 39 . . . . g.142617
CTGTTTGTAATGTATGCCAATTTAG | GTGTGGCAGAGAAGACACAGCTTCTGAAATTGAGT c.6600
L F V M Y A N L G | V A E K T Q L L K L S p.2200
. . . . . . g.142677
GTACCTGCTACTTTTATGCTTGTGTCTTTAGATGAAGGTCCAGGTCCTCCAATCAAATAC c.6660
V P A T F M L V S L D E G P G P P I K Y p.2220
. . . . . . g.142737
CAGTATGCTGAATTAGGCAAATTATACTCAGTAGTGTCACAGCTGATCCGCTGTTGCAAT c.6720
Q Y A E L G K L Y S V V S Q L I R C C N p.2240
. . . | 40 . . . g.144136
GTCTCTTCAAGAATGCAGTCTTCAATCAATG | GTAATCCTCCTCTTCCCAATCCTTTTGGT c.6780
V S S R M Q S S I N G | N P P L P N P F G p.2260
. . . . . . g.144196
GATCCTAATTTATCACAACCTATAATGCCAATTCAGCAGAATGTGGCAGACATTTTATTT c.6840
D P N L S Q P I M P I Q Q N V A D I L F p.2280
. . . . . . g.144256
GTGAGAACAAGTTATGTGAAGAAAATCATTGAAGACTGCAGTAATTCAGAGGAAACCGTC c.6900
V R T S Y V K K I I E D C S N S E E T V p.2300
. . . . . . g.144316
AAATTGCTTCGTTTTTGCTGCTGGGAGAATCCTCAGTTCTCATCTACTGTCCTCAGTGAA c.6960
K L L R F C C W E N P Q F S S T V L S E p.2320
. | 41 . . . . . g.144462
CTTCTCTGGCAG | GTTGCATATTCCTATACCTATGAACTGCGGCCCTATTTGGATCTGCTT c.7020
L L W Q | V A Y S Y T Y E L R P Y L D L L p.2340
. . . . | 42 . . g.148637
TTGCAAATCTTACTGATTGAGGACTCCTGGCAAACTCACAG | AATTCATAATGCACTGAAA c.7080
L Q I L L I E D S W Q T H R | I H N A L K p.2360
. . . . . . g.148697
GGAATTCCAGATGACCGAGATGGGCTGTTTGACACAATCCAGCGCTCTAAGAATCACTAT c.7140
G I P D D R D G L F D T I Q R S K N H Y p.2380
. . . . . . g.148757
CAAAAAAGAGCATACCAGTGTATAAAATGTATGGTAGCTCTATTTAGTAACTGTCCTGTT c.7200
Q K R A Y Q C I K C M V A L F S N C P V p.2400
. | 43 . . . . g.148974
GCTTACCAAATCCTGCAG | GGCAATGGAGATCTTAAAAGAAAGTGGACCTGGGCAGTGGAA c.7260
A Y Q I L Q | G N G D L K R K W T W A V E p.2420
. . . . . . g.149034
TGGCTTGGAGATGAACTTGAAAGAAGACCATATACTGGCAATCCTCAGTACACTTACAAC c.7320
W L G D E L E R R P Y T G N P Q Y T Y N p.2440
. . . . . . g.149094
AATTGGTCTCCCCCAGTGCAAAGCAATGAAACGTCCAATGGTTATTTCTTGGAGAGATCA c.7380
N W S P P V Q S N E T S N G Y F L E R S p.2460
. . . . . . g.149154
CATAGTGCTAGGATGACACTTGCAAAAGCTTGTGAACTCTGTCCAGAGGAGGTAAAAAAA c.7440
H S A R M T L A K A C E L C P E E V K K p.2480
. . . | 44 . . g.149887
GCCACCAGTGTGCAGCAGATAGAAATGGAAGAGAGCAAA | GAGCCAGATGACCAAGATGCT c.7500
A T S V Q Q I E M E E S K | E P D D Q D A p.2500
. . . . . . g.149947
CCAGATGAACATGAGTCGCCTCCACCTGAAGATGCCCCATTGTACCCCCATTCACCTGGA c.7560
P D E H E S P P P E D A P L Y P H S P G p.2520
. | 45 . . . . . g.151797
TCTCAGTATCAACAG | AATAACCATGTGCATGGACAGCCATATACAGGCCCAGCAGCACAT c.7620
S Q Y Q Q | N N H V H G Q P Y T G P A A H p.2540
. . . . . . g.151857
CACATGAACAACCCTCAGAGAACTGGCCAACGAGCACAAGAAAATTATGAAGGCAGTGAA c.7680
H M N N P Q R T G Q R A Q E N Y E G S E p.2560
. . . g.151890
GAAGTATCCCCACCTCAAACCAAGGATCAATGA c.7713
E V S P P Q T K D Q X p.2570
. . . . . . g.151950
aatgcacataattaactggttccatcaagactgtgcacccaggccttacagtccaacctt c.*60
. . . . . . g.152010
tttctgtgtctggctaatatttaaaactagaaaaactattcctaatcaacatggagtgga c.*120
. . . . . . g.152070
gagtttattcactgtcttatctgcagaaatttgctgtcaatatataacccgcctgcagtg c.*180
. . . . . . g.152130
gaaagtgtatagtgttttgtaataaatggcctgatgctaatgtgtaaatggcaaaggtgt c.*240
. . . . . . g.152190
atatagtatattaatgttgactgttaattcttaagcaagaaacttttttcttgatgagac c.*300
. . . . . . g.152250
tcacagatctacacaaactacaaaagttaattttcttgttacacccactgcactctgcaa c.*360
. . . . . . g.152310
ccagtgttgcctgcctcatggcagttggatcagctcctttacaaaaaagaaaaaaaaaaa c.*420
. . . . . . g.152370
accaacagcaacaaaacagagcccatccatgtcagccacaccaatagtttcatgttaatt c.*480
. . . . . . g.152430
ctttgccactggagtcaattttgctatgagcaatgtaaggctggtaacctttaaattatt c.*540
. . . . . . g.152490
tggttgatgtggaaaattggtgatgtaacactgtttctagatttttttcattgccttttt c.*600
. . . . . . g.152550
attctgatattaggttaatcactttgaagctatagttatgctgtaacatttagcatggct c.*660
. . . . . . g.152610
tcacaccaagttagtgtagccaatgaggaaaaagttaccataatgacagcagttgtccga c.*720
. . . . . . g.152670
gaagtgacagctgtattactcagagcttttacttcttacacctagaatattaaaatataa c.*780
. . . . . . g.152730
aacaaggggagaaatgtgacagtctattttcagttgcacatatgttccttatatataatg c.*840
. . . . . . g.152790
tttgacagttcaatctctgggtggaataaagaacacttacgtatcagtaatgggaatttt c.*900
. . . . . . g.152850
taaagatttaaaacaaatatgcaaaaatttgctatgccaagatgctggagcataatataa c.*960
. . . . . . g.152910
gactgtatttggtgtgcttgttttgtttctttggtagagtttattaggtgaatcttctaa c.*1020
. . . . . . g.152970
aactttccttctgttggatcccagtgacgtggaagtcatcagaaccccacggtacttgga c.*1080
. . . . . . g.153030
gtacctctctgcaccaagatagctggctgattttctgctcagtcacaattttacttgaaa c.*1140
. . . . . . g.153090
gcaagaattgtcctagctccttttccattattccaaaacgtttaacgttcaaagcagggt c.*1200
. . . . . . g.153150
ctcattaaaaaagaaactactggttgatataattgagatattacaatttcagaataaaca c.*1260
. . . . . . g.153210
tttgattaaaaataaggaaatcctcagttcatactgtatttaaaagagaattggtaactt c.*1320
. . . . . . g.153270
gaatgtgtgtaattttttggaacctgtctaaaaaccaaatacccctgcaaacagatacag c.*1380
. . . . . . g.153330
cccaccctattctatttaaatattttgctgttttattttatagaaattattttgctgaat c.*1440
. . . . . . g.153390
tcacaaatagaatttgatttaagaagaactttttgtcctgtggtgtgtttttggtttttt c.*1500
. . . . . . g.153450
ttttggttactttttttgtcctttttttttttttttaaaagaggactgcatattaaaatt c.*1560
. . . . . . g.153510
cattctgtgcatagcatgcctaggcatgacactgattcaggatttcagtcacatcaagtt c.*1620
. . . . . . g.153570
tttgtgcacagaaagatttgacctttggccctctactgaagattttgagaaatcaggatg c.*1680
. . . . . . g.153630
ttgacactgtaaaagtttcctaacataatcttgtactttttgtatgttttttatatacat c.*1740
. . . . . . g.153690
gtatatttaatgagcacaagcttggttgtattttttacaattcagttaatagggaaatgt c.*1800
. . . . . . g.153750
tttgtcaaaaggctacacttggaactgaacaaagcagaaacaaaattgagcattgcatta c.*1860
. . . . . . g.153810
ttttgtgattaaaaggggcaggtatttaagataaagctttgggtatcttatttgtagtac c.*1920
. . . . . . g.153870
tgtatagtcaacctgtgcttctaggtgttcctgtaggacattttgacaccgatactttga c.*1980
. . . . . . g.153930
gtgaaagtcacacacggtgtttgcaattccaactgatttttgttttgtttttattttttt c.*2040
. . . . . . g.153990
gttgttttcttctttgagatggagtcttgctctgtcacccaggctggagtgcagtggcac c.*2100
. . . . . . g.154050
aatcttggctcactgcaacgtcgcctcctgggttcaagcgattcttccgcctcagcctcc c.*2160
. . . . . . g.154110
cgagtagctgggattagaggtgcccaccaccacgcccagctaatttttgtatttttgtag c.*2220
. . . . . . g.154170
agacagggtttcaccacgttggccaggctggtcttgaactcctgacctcaggtgatctgg c.*2280
. . . . . . g.154230
ccgcctcggcctcccaaagtgctgggattgcaggtgtgagccaccgcgcctggccccagt c.*2340
. . . . . . g.154290
tgatagtttttttaatttaaaagttcctcaattccaagctctttaaacgagtgaaatagg c.*2400
. . . . . . g.154350
ttaactttatttggatgagttaggtgtaccatctcaccatctgagaggagatttatatat c.*2460
. . . . . . g.154410
ttcctgctgctccttaacaaaatatgtaatgtacttaaaaactttaacgacttcctagtt c.*2520
. . . . . . g.154470
gagagaaaacttgacatataaaaggctgtgaatttttctgcttggaggaagagcccaacc c.*2580
. . . . . . g.154530
ttggttgctttgaagttacaagcccccttgtgccaggtgaggggcttgtgagtcattttt c.*2640
. . . . . . g.154590
gtctccatttgaggaagagtggtattcgttgtgactaggagcaagggaaagtggagttat c.*2700
. . . . . . g.154650
ttttgtttgtgcaaattattttctatatttaactcaagcattaatgtataaccagaaatt c.*2760
. . . . . . g.154710
taaagatgcatgttgttgcaagagcaacataatggtgattttgaggtctttttctgaaca c.*2820
. . . . . . g.154770
caagtggcacattttaaatttcaagtcttcaaagtgcctaaggattatttagttctccct c.*2880
. . . . . . g.154830
caactgattttttgagccatatatttcctattttaaatgtttgcggaatcgccagtcttc c.*2940
. . . . . . g.154890
ctttgaaagaaacagcccccagaattctaaatgacacgattatagaagacagtagaatgt c.*3000
. . . . . . g.154950
gttaccataaagactgaagatattttagttgtaaaaccatgtgaacaagggcttttgccc c.*3060
. . . . . . g.155010
tattgtatctaagtatttcagtgcacaacttgttaaaccatgttgctgctgtttctaagc c.*3120
. . . . . . g.155070
cctccaccaactgaactttcatgtttagcattgtagaggcagaaataacatactaggttt c.*3180
. . . . . . g.155130
tttttttctttcattgatttttctcctggtgataatttcccagccttgtgtcttttagct c.*3240
. . . . . . g.155190
gttgtgtatacaaatttagaattaaaatgttttctatttttttcatgattaacttagtga c.*3300
. . . . . . g.155250
ataacttaaatccttaatcctcgtagtggttagaaagatgaggagacttttttgacttac c.*3360
. . . . . . g.155310
atttgtaaatgaaaacaagtctgtgaatattcagatgactacttcgaagtaattcagttt c.*3420
. . . . . . g.155370
ttttattagtatttttccagcttatgttttcccatgagctattttactttgctgaatttt c.*3480
. . . . . . g.155430
gtgggtaatttggtggatatatcctgccttatttaggattatagctggataagaaaattg c.*3540
. . . . . . g.155490
ccttttcattgtaagtgcccagttttggtctctagtttgaaggtactacatactgccgat c.*3600
. . . . . . g.155550
aaaggaaaacactcccctacaccccagtttttgtgttaccaagaaaaaaaaaacagtatt c.*3660
. . . . . . g.155610
ggtttcatagtaggactcaaccagaattggtcctacatatatgtgagtgttcagtttttg c.*3720
. . . . . . g.155670
caaataaggtttttgagtgtgataaaacactacagaagtgctaagtgtattgagaatttg c.*3780
. . . . . . g.155730
ctgctgattgtatttataacaattacttgacgtttgcagaaatttagcactttccctcca c.*3840
. . . . . . g.155790
aatttataggtgtaagagaagcgggggcaaggtgcaccacattttaaaactgcaaatgtg c.*3900
. . . . . . g.155850
tgaaaatttatttagagattcagattcctaaaaggaaatttcaccacccaagtcatgcac c.*3960
. . . . . . g.155910
ttcttagccttttacaagccaacagactgacatgaagattgttcacagttcctaagattt c.*4020
. . . g.155945
agcacatatacaaaaataaaactttataaattcaa c.*4055
(downstream sequence)
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